Candidatus Fervidibacter sacchari: Q2T83_03150
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Entry
Q2T83_03150 CDS
T09227
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
fsh
Candidatus Fervidibacter sacchari
Pathway
fsh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Q2T83_03150 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fsh03400
]
Q2T83_03150 (uvrB)
DNA repair and recombination proteins [BR:
fsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Q2T83_03150 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Q2T83_03150 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
LAGLIDADG_3
Intein_splicing
UVR
HTH_3
HTH_31
HTH_19
Thermo-DBP
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
WKU16829
LinkDB
All DBs
Position
complement(709563..713228)
Genome browser
AA seq
1221 aa
AA seq
DB search
MQCFQLVTDLKPKGDQPKAIRQLLEGLRKGYRFQTLIGITGSGKSLPPEERVLIGVEKDG
YIYPQLVPIGELVDEILAEARPLLTNWGDEIVFSDKLSKRYFAFAFDPVTKRSGWRPIKA
FHRHPSPDTLYRVRTACGREVIVTGDHNLWVLRDGQFCLLPTKEIKDGDYIPLPLSLPSP
QKPLKYISTASYLRAEKVYAKVPLEAVASLPLSREKRWRVHHGEGVPLSVIPDELMGQVT
LCGKQHSLSAHVQLNEDWLSLIGVYIAEGHATPRYVIISIRNPIWRRKVERCLRRLGFTF
RHRPDGDIQISMMLLSRLLKQWCGRTSKEKHLPPFWMSLSNRQLSQMLAAYFAGDGSVGA
EGVYCVTVSHRLADDLLWALLRFGIWARVRRRIVKKPSGKLSCCWEIKVTGRENLERFAN
AIGFAFSSKQRRLKELLHRYRKRPTNTNVDVIPIAGLSFQDARKRLGFTQKAIAQEMNVA
PSFIALIEHRKRYPSRTTWKRLVNALRSYLLSEHPDISLLRSWRSLLNCRWTRIAAIEPV
KPTSKWVYDLSVEDWETFIAGFGGLFVHNTFTIANVIAQWNRPTLIICHNKTLAAQLCAE
LRQLFPNNAVEYFVSFYDYYQPEAYIPQTDTYIEKDCDINDEIDRLRHAATQAVSTRRDV
IVVATVSCIYGLGSPELYQEMTLTLERGKLYDLRWVLHKLVDLYFARNDYELERGTFRLR
GDVLEVRPAYEEMVYRIEFFGDEVDSITVIDPLTGEVLERKDKVVIYPASHYVCTRERLE
RALKSIEQELQEQLEKFRREGKLLEAQRLEQRVRYDLELLRETGYCKGIENYSRHFDGRK
PGEPPYTLIDYFPKDFLLIIDESHQTIPQLRAMYEGEMSRKRNLVEFGWRLPSAYDHRPL
KFEEFLERINQCIFMSATPGEWELSVSQQVVEQIVRPTGLLDPEVEVRPTKGQIEDLVGE
IKKRVAKGQRVLVTTLTKRTAEDLTAFLNELGIKAHYLHHDIEAIERTEILRDLRLGNYD
VLVGINLLREGLDLPEVSLVAILDADKEGFLRSYTSLIQIMGRAARHVEGKVIMYADTIT
ESMRKAIEETNRRRRIQEEFNRKHGIKPQSIQKPVFDAYLPVPSLMERRAAYQAGTGDQG
LGTGETLTLDEIPFVIKRLEKEMQEAAKRLEFERAAELRDRIRYLRNLLYGTSPTDGQRT
PQPPTPLKRKQVKNPRNKAKW
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcttccaactcgtcactgatctcaagcccaaaggtgaccaaccgaaagccatt
aggcaactgttggaagggttaaggaaaggttatcggtttcaaacgctcatcggaattacg
gggagcgggaagagcctgcctcccgaagagcgagtgcttattggtgttgaaaaggatggt
tacatttaccctcaactggtgcccatcggcgaattagtagatgaaattttggcagaggca
agaccattgctaacgaattggggagacgaaatcgttttcagtgataagttgtcaaagcgc
tattttgccttcgcctttgaccctgtgaccaaacgaagcgggtggcgtcctatcaaggct
tttcatcgccatccatcccctgacactctttatcgcgtccgaacagcatgcggacgcgaa
gttatcgtaactggtgaccacaatctttgggtgctcagagacggacaattttgcctccta
ccaacgaaggaaataaaagatggagactacatcccccttcccttgtcccttccgagccct
cagaagcctctcaaatacatttctactgcctcttaccttcgggcagaaaaagtttacgcg
aaagttcctcttgaggcggtagcatcattgcctttatcccgggagaaacgatggcgcgtc
catcatggggaaggagttcccctctcggtaatccctgacgaattaatgggtcaggtaacc
ttatgtgggaaacagcattctctttccgctcatgttcaactgaacgaagattggttaagc
ctaataggcgtttacatagccgagggtcacgcgaccccccgctatgttatcatctctatc
cgaaatcccatttggcgaagaaaagtggaaagatgccttcgccgtctcggttttactttc
aggcatcgccccgatggtgacattcaaatctctatgatgcttttaagtcgcttgctaaaa
caatggtgcgggcgaacatctaaggagaagcatcttcctcctttttggatgagcctttcc
aaccgacaactgagtcaaatgttggcagcgtattttgctggagatggaagtgtgggagcg
gaaggtgtttactgtgtgacagtgagccatcggctcgctgatgatctcctttgggcactc
cttcgcttcgggatttgggcacgggtgcgtcgccgaattgttaagaagcccagcggtaaa
ctctcctgttgttgggagatcaaggtcacaggacgggaaaatttagaacgctttgctaat
gccataggtttcgccttttcctccaagcaacggcggttaaaagagttgctccatcgttat
cggaaacgccctactaacaccaatgtggatgttatcccgatcgccggtttatcctttcaa
gatgcgcgcaaacgactgggatttactcagaaagcaatagcccaagagatgaatgttgcc
ccctcctttatcgccctgatagaacacaggaagcgatacccatcccgcaccacttggaaa
cgactcgtgaatgccttgcgctcctacttgctatcggagcaccctgatatctctctttta
cgctcttggcgttctcttttgaattgccgatggacgaggattgctgctattgaacccgta
aaaccaacaagcaagtgggtttatgatctgagcgttgaggattgggaaactttcatagca
ggctttggtggtcttttcgtccacaataccttcaccatcgccaatgtcatcgctcagtgg
aacagaccgacgctcatcatctgccacaacaagacgctggcagcgcaattgtgcgctgaa
cttcgtcaactgttcccaaacaacgccgttgaatacttcgtcagtttctacgactactat
cagcccgaagcctacatcccccagaccgacacctacattgagaaggattgcgacatcaac
gacgaaattgaccggctaaggcacgctgcaactcaagccgtttcaacccgcagggatgtc
atcgtcgttgcgacggtttcgtgcatttacggcttaggttcgcctgaactttaccaagag
atgacgctgactttggaacgaggaaaactttatgacttgcggtgggtgctccacaaactc
gttgacctttacttcgcccgcaacgattacgaactggaacgagggacttttaggttgcgt
ggcgatgtgcttgaggttcgtcccgcctacgaagaaatggtctaccgcattgagttcttt
ggtgacgaagttgacagcatcaccgttattgacccattgacgggagaagttttggagcgc
aaagataaggttgtcatctacccagcaagccactatgtctgcacccgtgagcggttggaa
cgagcactcaagtccattgaacaggaattgcaggagcaacttgaaaagttccgcagggaa
ggcaagttgctggaggcacaacggctggagcagcgagttcgttacgatttggaattgctg
cgtgagacaggctattgcaagggcattgaaaactactcccgccactttgacggtcgcaag
ccgggcgaaccgccttacacgctcatagactacttcccgaaggactttttgctcatcatt
gacgagagccaccagacaatcccgcaacttcgggcgatgtatgagggcgagatgagccga
aagcgaaacttggtggagttcgggtggaggttgccgagcgcttatgaccatcgcccgctt
aagtttgaagagttcttggaacgcatcaaccaatgcatcttcatgtcagcgactcctggt
gaatgggaactttctgtcagccagcaagtcgttgaacagattgtccgaccgacgggtttg
cttgacccagaagttgaagtcagaccgacgaaagggcaaattgaagacttggtcggcgaa
atcaaaaagcgggttgctaaagggcagcgggttttagtcacgacgctgacgaaacggacg
gcagaggatttgacggcattcctgaacgaattgggcatcaaagcccattacctgcatcac
gacattgaagccattgagcgcaccgaaattttgcgcgatttgcggttgggcaattacgat
gtcttggtcggcatcaaccttttgcgggaaggtttggacttacccgaagtcagtctcgtc
gccatcttggatgccgataaagaaggctttttgcgctcctacacttcactcatccaaatc
atggggcgggctgcgaggcatgtggagggcaaagtcatcatgtatgccgacaccatcacc
gaaagcatgagaaaagccattgaggaaacgaaccgaaggaggcgaattcaggaagagttc
aaccgcaagcacggcatcaagccgcagagtattcaaaagccagtctttgacgcctatttg
ccagtcccgtcgctgatggagaggcgtgccgcgtatcaagcagggactggggatcaggga
ctggggactggtgagactctgacgcttgacgaaattcctttcgtcatcaagcggcttgag
aaggagatgcaagaggcagcgaagcggttggagtttgagcgagccgctgaattacgcgac
cgaatccgatatttgcgtaacttgctctatggcacttcgccgaccgatgggcagcggacg
ccccaaccaccaaccccgctgaagcggaagcaagtcaaaaacccgcgcaataaagcgaag
tggtaa
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integrated database retrieval system
