Flavobacterium sangjuense: GS03_00860
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Entry
GS03_00860 CDS
T06656
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
fsn
Flavobacterium sangjuense
Pathway
fsn02020
Two-component system
fsn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fsn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GS03_00860 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GS03_00860 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fsn03021
]
GS03_00860 (rpoN)
Transcription machinery [BR:
fsn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GS03_00860 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
HTH_Crp_2
Crp
MarR
CLZ
Motif
Other DBs
NCBI-ProteinID:
QBZ97371
UniProt:
A0A4P7PR64
LinkDB
All DBs
Position
complement(969856..971325)
Genome browser
AA seq
489 aa
AA seq
DB search
MLKQFLNLKLSQKLSPQQIQLMKLIQLPTQAFEQRLKEEMVENPALESGKEEEELYEKDE
FDNNEDDYDDYEGSDNIDTDEINIDEYLSNDETPDYKLQANNYSDDDEERQMPFAASTSF
HQDLINQLNTFILTDEQRDIAEFLVGSIDDDGYLRRSVPDIVDDMAFTQGIYTDEKTVEK
ILHIIHDLEPSGVGARDLHECLLLQLRHKTPTEYVDLAINIIENNFDAFTKKHYEKLLTT
YEISKEQLKKAIEEIEKLNPKPGGSFDSNSRTVEQIVPDFAIRIVDGELELTLNGRNAPT
LHVSKDYQEMLQTYKVSKDKSNQQKDAVQFIKQKLDSAKWFIDAIRQRQETLFVTMNAIM
HFQQEYFLDGEETKLKPMILKDIADMVGLDISTVSRVANSKYVDTPYGTKLIKEYFSESM
KNDQGEDVSTLEIKKILKNIIEEEDKSKPLPDDQLAEILKEKGYPIARRTIAKYRDLLDI
PVARMRKKI
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcagtttctaaatctaaaattatcacaaaaactatcacctcagcaaattcag
ttgatgaagttgatacaattgcctacgcaggcttttgaacaacgacttaaagaggaaatg
gtagaaaatccggctttggaaagtggtaaagaagaggaagaattgtatgagaaagatgag
ttcgacaacaatgaagatgattatgatgattatgaaggcagcgacaacattgacactgac
gaaatcaacattgacgaatatttaagcaacgacgaaacgcctgattacaagcttcaggcc
aataattatagtgatgatgatgaagaacgccaaatgccgtttgctgcatcaaccagtttc
catcaggatttaatcaatcagttaaatacttttatcttaacggatgaacagcgcgatatt
gctgagtttctggttggaagcattgacgacgatggttatttacgccgaagtgttcccgat
attgttgacgatatggcgtttacgcaaggcatttatacggatgagaaaaccgttgaaaaa
atcctgcacattatccatgatttagagccttccggtgttggcgcaagagatttacacgaa
tgtttgttactgcaactccgacacaaaacaccaacagaatatgttgatttggcaatcaat
attatagagaataattttgatgcttttaccaaaaaacattacgagaagcttttaactacc
tacgaaatttcgaaagagcaactcaaaaaagcgattgaggaaattgaaaagttaaaccca
aaacctggtggttcttttgacagcaacagcagaacggtagaacaaattgttcccgatttt
gcgattcgaattgttgatggcgaattagaacttacgttgaacggcagaaatgctccaacc
ttgcatgtttccaaagattatcaggaaatgctgcaaacctataaagtttctaaagataaa
tcgaatcagcaaaaagatgctgtgcagtttattaagcaaaagttggattcggccaaatgg
tttatcgatgcgattcgtcaacgtcaggaaacgctttttgtgacgatgaatgctattatg
cacttccagcaggaatatttcctcgatggtgaagaaaccaagttgaaaccgatgattttg
aaagacattgccgatatggttgggcttgatatttctacggtttcccgtgtggctaatagt
aaatatgtcgacacgccttacggaaccaaattgataaaagagtatttttcagaatccatg
aaaaacgatcagggtgaagatgtttctactttggaaatcaaaaaaattctgaaaaacatt
atcgaagaagaagacaaaagcaaacctttacctgacgatcaattagctgaaatcctaaaa
gaaaaaggttatccaattgcccgaagaacgattgcaaaatacagagacttgcttgatatt
cctgtagcaagaatgaggaaaaagatataa
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