Candidatus Protofrankia datiscae: FsymDg_3700
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Entry
FsymDg_3700 CDS
T01530
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
fsy
Candidatus Protofrankia datiscae
Pathway
fsy00470
D-Amino acid metabolism
fsy00550
Peptidoglycan biosynthesis
fsy01100
Metabolic pathways
fsy01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
fsy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FsymDg_3700
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FsymDg_3700
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
FsymDg_3700
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fsy01011
]
FsymDg_3700
Enzymes [BR:
fsy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
FsymDg_3700
Peptidoglycan biosynthesis and degradation proteins [BR:
fsy01011
]
Precursor biosynthesis
Amino acid ligase
FsymDg_3700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_4
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
AEH10977
UniProt:
F8AVM7
LinkDB
All DBs
Position
complement(4348892..4350049)
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AA seq
385 aa
AA seq
DB search
MPGSPPRRTRIAVLYGGRSTEHAISCVSAGSVLRALDRRRYDVVAVGITPDGRWVLGPDD
PDALAVRDGVLPAVDATARPVVLPGDPTVGGLIALDGVAVSAGPGPADRGTADLGAVGLG
AVDVVFPLLHGPFGEDGTVQGLLEMAAVPYVGSGVFASAAAMDKQYMKILLAAAGLDIGP
YTVLRAGQALSGDDRERLGLPVFVKPARGGSSIGISRVDAWDDLATALKAARAVDPKVLV
EAAVVGREVECGVLGSLDGGGPEASLPAEVTVASSAGSAGFYDFEAKYLSDAARFDVPAN
LPAEVTAAVRQIAVRAFVALDCAGLARVDVFVRPDGSVVVNEVNTMPGFTPTSMFPRMWA
ATGLDYPRLVDRLVALATRHGTGLH
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcctggctctccgccgcgccggacccggatcgccgtcctgtacggcggccgcagcacc
gagcacgcgatctcctgtgtctcggctggcagcgtcctgcgagccctggaccggcggcgt
tatgacgttgtcgctgtcggtatcacccccgatggccgatgggtactcggcccggacgat
ccggacgcgctcgccgtccgcgacggcgtgctgcccgcggtcgacgccaccgccaggccg
gtggtgctgccaggtgaccccaccgtgggcggcctgatagcgctcgacggggtggcggtc
tcggcgggccccggccccgccgaccgcggtaccgccgaccttggcgccgttggccttggc
gccgtcgacgtggtgttcccgctgctgcacgggccgtttggtgaggacggcaccgtgcag
gggctgctggagatggccgccgtcccctacgtcggctccggggtgttcgccagcgccgcg
gccatggacaagcagtacatgaagatcctgctcgccgccgccgggctcgacatcggcccg
tacacggtgctgcgcgccgggcaggccctgagcggtgacgaccgcgaacgcctcggcctg
cccgtgttcgtcaaaccggcccggggcgggtcgagcatcggcatcagccgggtggacgcc
tgggacgacctggcgaccgcgctgaaggccgcccgcgccgtcgatccgaaggtgctggtc
gaggccgccgtcgtcggccgtgaggtcgagtgcggcgtgctcggcagcctcgacggcggc
gggccggaggcgagcctgcccgcggaggtgacggtggcctcgtccgcggggtccgcgggc
ttctacgacttcgaggccaagtacctttcggacgcggcccgcttcgacgtcccggcgaac
ctgcccgccgaggtcaccgccgcggtccgtcagatcgccgtgcgggcgttcgtcgcgctg
gactgcgcgggcctcgcccgggtggacgtgttcgtccgcccggacggctcggtcgtcgtc
aacgaggtgaacaccatgccggggttcaccccgacctcgatgttcccgcggatgtgggcc
gccaccggcctggactatccgcggttggtggaccggttggtcgcgctggcgacccgtcac
ggcacggggctgcactga
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