Fusobacterium varium: FV113G1_01040
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Entry
FV113G1_01040 CDS
T05280
Name
(GenBank) putative transcriptional regulator
Organism
fva
Fusobacterium varium
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_2
AAA_5
AAA
Mg_chelatase
SpoVT_C
nSTAND3
DUF815
HTH_8
AAA_7
AAA_16
AAA_22
AAA_3
CENP-B_N
HTH_7
HTH_50
GAF_2
Motif
Other DBs
NCBI-ProteinID:
BBA49758
LinkDB
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Position
complement(122857..124623)
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AA seq
588 aa
AA seq
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MEISLLDIKEHVKKYASAISSLINVDVGIVDKNMVRVTGTGLYKNIEGVYALGSVYKNSL
ETGKTNIIENPRQHDLCTECLDKNKCREKLEIATPIYCRDEIVGVIGLVCFNDEQKKKIL
SDIDSYLNFTKQIAEFIGIKFYEYQENLMQKDRESTLNTIIDNISKGVIISDCNDVIIKI
NNIASAKLKLKSDVLGKTMKLVSQNDYLMNEEVFNMVIENEEYNVAGKIIPLKSFNKTRS
NAFVFEDVKKISRNILEMTSSDNMITLENIYGTSAATQSLKENIQKIANTNSTVLITGES
GTGKELVARSLHSHGNRRNKPFVVINCSAIPDTLLESELFGYVKGAFTGASQNGRMGKFE
LANTGVIFLDEIGDMPLYLQAKILRVIQEKKIERIGSNKSIDLDIKIIAATNIDLEKKIM
EQKFRGDLYYRLNVIPIKLLPLRERKEDILPIINSLIDKYNRLSDKYVHSIDEDVKRALI
NYEWPGNVRELENVMELMINMSGSNGVISSDLLPENILHHCDNISSSIDELLINDKSELE
DFEKIEKIYIEKSLKKYGDDTESKKYIADKMNIGLTTLYRKMKKYNIK
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggaaatatccctgttagatataaaagaacatgtaaaaaaatatgccagtgctatatca
agccttataaatgttgatgttggtatagttgataaaaatatggtaagggttactggaact
ggcctttataaaaatattgaaggtgtatatgctttaggaagtgtatataagaactcactt
gaaactggaaaaacaaatataattgaaaacccaagacaacatgatttatgcactgaatgt
ctggataaaaataaatgcagggaaaaacttgaaatagctactcctatttattgtcgtgat
gagatagtaggtgtcattggacttgtctgtttcaatgatgagcagaaaaaaaagatactt
tctgatattgattcttatctgaattttacaaaacaaattgctgaatttataggaataaaa
ttctatgaatatcaagaaaatcttatgcagaaagacagagaatctactttaaatacaata
attgacaatatcagcaaaggtgttataatcagtgactgtaatgatgttattattaaaata
aacaatatcgcctcagccaaattaaaacttaaatcagatgttttaggaaaaactatgaaa
cttgtcagtcagaatgactatcttatgaatgaagaagttttcaatatggtaatagaaaat
gaagaatataatgttgctggaaaaattatccctttaaagtctttcaataaaacaagaagt
aacgcttttgtttttgaagatgtaaaaaaaatcagtagaaatattcttgaaatgacaagc
agtgacaatatgattactttagaaaatatttatggaacctctgctgctactcaatctctc
aaagaaaatattcaaaaaatagctaatacaaattccactgtccttattacaggagaaagc
ggaactggtaaagaactggtggctcgttctctgcattcacatggcaacagaagaaacaaa
ccttttgttgtgataaattgttctgctattccagatactcttctggaaagtgaacttttt
ggatatgtaaaaggagcatttactggagccagtcaaaatggacgtatgggaaaatttgaa
ctggccaatactggagtcattttcctcgatgaaataggggatatgcccctttaccttcaa
gctaaaatattaagagtaattcaagaaaagaagatagaacgtataggatcaaacaaaagt
attgatttagatataaaaataattgctgctactaatatagatttagaaaaaaaaataatg
gaacagaaattcagaggagatttatactatagattgaatgtaattcctatcaagcttctt
ccattgagagagagaaaggaagatatcctccctattatcaacagcttgatagataaatat
aacagactttcagacaaatatgttcattcaatagatgaggatgtaaaaagagctcttatc
aactatgaatggcctggaaatgtaagagaactggaaaatgtcatggagcttatgataaat
atgagtggaagcaatggagtgatttcttcagatcttcttcctgaaaatattcttcatcac
tgtgacaatatttcctcatctatagatgaattactgattaatgataaatcagaactggaa
gattttgaaaaaatagaaaaaatctatatagaaaaatctttaaaaaaatatggtgatgat
actgaaagtaaaaaatatatagctgataagatgaatattggtcttactactctatataga
aaaatgaaaaaatataatataaagtaa
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