Fragaria vesca (woodland strawberry): 101293372
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Entry
101293372 CDS
T02666
Name
(RefSeq) starch synthase 3, chloroplastic/amyloplastic
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00500
Starch and sucrose metabolism
fve01100
Metabolic pathways
fve01110
Biosynthesis of secondary metabolites
Module
fve_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
101293372
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
fve01003
]
101293372
Enzymes [BR:
fve01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
101293372
Glycosyltransferases [BR:
fve01003
]
Polysaccharide
Storage polysaccharide
101293372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
CBM53
Glyco_transf_4
Glyco_trans_4_4
Glycos_transf_1
Motif
Other DBs
NCBI-GeneID:
101293372
NCBI-ProteinID:
XP_004293290
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All DBs
Position
LG3:487363..494805
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AA seq
1091 aa
AA seq
DB search
MEVSLQAHRPLSCRTVFQDRRTNLKLKPVSGFCPHGRYSSWFKGDLTTGVSCKITASSAD
FSRRQRKVSSSRPNGPGPKATVPKPPVETSVPKTSQRNTGDKKGFASSTASVSGPKVDVK
RIDETSRKVAESSSLSKTSATGRSFQEVENGSRDKGIDIDKKLSHEASLKLKLEMEEKQR
MEEIERLAEENFSKGNKLFVYPQVVKPDQHIEVFLNRSLSTLNSEDDVVIMGAFNDWRWK
SFTIRLIRTNLKGDWWSCQFHVPAEAYKIDFVFFNGKDVYDNNDKKDFCIEIESGMDAYA
FEDFLLEEKRKELEKLAEEQAERERQAEEQRRIEAEKAAREFDRAEAKAETERRRKLVQE
LAKKAVRSVPDVWYIEPREFKGEDVVRLYYNRSSGPLANAKELWIHGGHNGWSAGLSIIE
SLVRSEEKDGDWWYAKVVVPEQAVVLDWVFADGPPQNATVYDNNHRHDFHAIVPKSIPEE
QYWVEEEHQIYRKLQEERRLREEAIRAKAKKTALMKAEMKEQTLRRYLLSQKHVVYTEPL
DVQAGSMVTIFYNPANTVLNGKPEIWFRCSFNHWAHRRGPLPPQKMVPAENGTHVKATVM
VPLDAYVMDFVFSESEEGGLFDNKNEMDYHIPVFGGVSKESPMHIVHITVEMAPIAKVGG
LGDVVTSLSRAVQDLNHHVDVILPKYDCLNLSNVKEFQYNRTYSWGGTEIKVWFGKVEGV
PVYFLEPQNGLFYKGCIYGCKNDSERFGFFCHAALEYLLQSGSHPDIIHCHDWSSAPVAW
LYKDHYSHYGLSKARIVFTIHNLEFGAHYIGKAVAYSDKSTTVSETYSKEIARNPAVAPH
LYKFHGIINGIDQDIWDPYNDGFLPISYTSENVIEGKKAAKEALQQRLGLKTADLPLVGI
ITRLTQQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHGDRARLC
LTYDEPLSHLIYAGSDFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDK
ERAEAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGQDWFNSLCKTVMEQDWSWNRPAL
EYMELYHAARK
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgtctttgcaagctcataggccactcagttgcagaactgtgttccaagacaga
agaaccaatctcaagctcaaaccagtttctgggttctgtcctcatggaagatattcttca
tggttcaaaggagacctgacaactggggtttcatgtaaaattactgctagttcagctgat
ttttctaggagacagagaaaagtgtcgagttcaaggcctaatggccctggtccaaaggca
acagttcccaaacctccagtagagactagtgtcccaaaaacaagtcaaagaaatactgga
gacaaaaagggttttgcgtcttccacagccagtgtttctgggccgaaagttgatgtaaag
aggattgatgaaactagtcgtaaagttgcggagtcttcatcacttagcaaaacatcagca
actggtagaagctttcaagaggtagagaatgggagtagagataaaggcattgatattgat
aagaagctatctcatgaagcttctttgaagttaaagttggagatggaagaaaaacaacgt
atggaggagattgagaggttagctgaggaaaacttctccaaagggaacaagctctttgtc
tatcctcaagtggtgaaacctgatcaacatatagaagtgtttcttaatagaagtctttcc
accctaaacagtgaagatgatgtagtcattatgggggcttttaatgactggcgctggaaa
tcttttaccattcggttgatcagaacaaatctcaaaggggattggtggtcttgtcaattt
catgttcctgccgaagcatataagatagattttgtgttcttcaatggaaaagatgtttat
gacaataatgacaagaaggatttctgcatagaaatagaaagtggaatggacgcctatgca
tttgaagatttcttactcgaggagaagcgtaaagaacttgagaaacttgcagaggagcaa
gctgagagggaaaggcaagcagaagagcagaggcgaatcgaagcagagaaggcagcaaga
gaatttgacagagcagaggcaaaggcagagactgaaaggagacggaaattggtgcaagag
ttggccaaaaaggctgtaaggtcagttccagatgtttggtacatagaacctcgggagttt
aaaggtgaggacgtggtgaggttgtattataaccgaagctcaggtcctcttgctaatgct
aaggaactgtggattcatggaggacataatggttggagtgctggcttatcaattattgaa
agtcttgttaggtctgaggaaaaggacggtgactggtggtatgccaaagttgttgtacct
gaacaagctgttgtattggattgggtttttgccgatggaccacctcagaatgccacagta
tatgataacaaccatcgtcatgatttccatgcaatagttccgaagtctattcctgaggaa
caatattgggttgaggaagaacaccagatctataggaagctccaggaggagaggagatta
agggaggaggccatacgtgccaaggccaagaaaacagcacttatgaaagcagaaatgaag
gaacaaactctgagaaggtacctgctgtctcagaagcatgtagtctacactgagcccctt
gatgtccaagctggaagcatggtcacaattttctacaatcctgccaatactgttcttaac
ggaaagcctgagatttggttcagatgctcctttaaccattgggcccaccgccgtggtcct
ttgccaccacagaaaatggtacctgcagaaaatggtacccatgtcaaagccactgttatg
gttccactcgatgcatacgtgatggactttgtcttttctgagagtgaagaaggcggactt
tttgataacaaaaatgaaatggattatcacattccagtgtttggaggagtttcaaaggag
tcaccaatgcacattgtgcatatcactgttgaaatggcacccattgccaaggttggaggc
cttggtgatgtggttaccagtctatcccgagctgtacaagacttaaatcaccatgtcgac
gtcattcttcccaagtatgactgtttgaaccttagcaatgttaaggaattccagtataac
agaacctattcttggggtggtactgaaatcaaagtttggtttgggaaagtggaaggggtt
ccagtctactttctggaacctcaaaatggactgttttataagggttgtatatatggttgt
aagaatgattcggagagatttggtttcttttgccatgctgctctagaatatctactccaa
agtggatcccatcctgatatcattcattgccatgattggtctagtgcacctgttgcctgg
ttatataaagatcattactcgcattatggtcttagcaaagctcgcattgtcttcacaatt
cacaatcttgaatttggagcgcactatattggaaaagctgtggcgtactcagacaagtct
actactgtatctgagacttattctaaggagattgctagaaatcctgcagtagctccgcac
ctctacaagttccatggcataataaacggaattgatcaagatatatgggacccatacaat
gatggtttcctacctatatcatatacttctgaaaatgttattgaaggcaaaaaagctgct
aaggaagccttgcaacaaaggcttggtctgaaaacagcagatctccctttagtaggtatt
attactcgcttaactcagcagaaaggaatccatcttatcaagcatgccatttggcgtacc
ttggaacgcaatggacaggttgtattgcttggttcagctccagatcctcgtatccaaaat
gactttgtaaatttggcgaatcaattacattcttctcacggtgatcgtgctcgtctttgt
ttgacttatgatgagccactctcacatttgatatacgctggttctgatttcatccttgtt
ccttcaatatttgagccatgtggactgacccaacttgtagcaatgagatacggttccata
cctgttgttcgaaaaaccggagggctctatgacactgtgtttgatgttgaccatgataaa
gagagagcagaggcgcagggtcttgaaccaaatgggttcagtttcgatggagctgatgct
gctggtgttgattatgctctaaatagggctatctctgcctggtatgacggtcaagattgg
ttcaactcgttgtgcaagacagtgatggagcaagattggtcttggaatcggccagctctt
gaatatatggagttgtatcacgcagcacggaagtga
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