Fusarium venenatum: FVRRES_08433
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Entry
FVRRES_08433 CDS
T09539
Name
(RefSeq) uncharacterized protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
fvn
Fusarium venenatum
Pathway
fvn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fvn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FVRRES_08433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fvn03041
]
FVRRES_08433
Enzymes [BR:
fvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FVRRES_08433
Spliceosome [BR:
fvn03041
]
Complex C
Other components
Step II factors
FVRRES_08433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
AAA_30
T2SSE
nSTAND3
ABC_tran
SRP54
AAA_16
PhoH
TsaE
Motif
Other DBs
NCBI-GeneID:
37260072
NCBI-ProteinID:
XP_025592071
LinkDB
All DBs
Position
III:1185154..1188747
Genome browser
AA seq
1197 aa
AA seq
DB search
MDDLLNLELLSLVSKVTSEVQNHLGVGEKTVAEFLIAKRTECNSFDEFRDNLETTTPGLP
PSLVESIDRLVLALHPKFKGKAKGEPKEHSSRTLQEKEKVFSGLALPDKEPARDDGADAI
DDTLALLEGLEPKAKKEKPTRKRSRSPENDQKESRRRRRDRSRSRERRKRDKYRSRSRSQ
ERGDEDWRDGHRDSRKDRRGRRRHDDDDRFRNAPAPEIDDAPQLHKVYQGHVTGLKDFGA
FVNLHNVKGRIDGLVHVSRMSAGERVNHPSDLVTQGQEVWVKVTSLDKDQNGRDRVGLSM
KDVDQQSGQDLEPQVRMSTGANMEALGGALGGARDGFAEPSGPRNDMGPPRRQKKRMTSP
ERWEIRQLIASGVAKASDYPDLEEDYNATLRGDGEMELEEDVDIEVREEEPPFLAGQTKQ
SLELSPIRVVKAPDGSMNRAAMSGTNLAKERKELKQQEADAAAKDEPKENLSQQWQDPMA
DPDKRKFASDLRNARKNQTAEDVPEWKKAVIPKGQSLGKRTNMSIKDQRESLPVFAFRTQ
LIKAVHENQILIVVGETGSGKTTQLTQYLAEAGFANDGMIGCTQPRRVAAMSVAKRVAEE
VGCKLGEEVGYTIRFEDCTSPSTKIKYMTDGMLQREILVDPDMSRYSCIMLDEAHERTIA
TDVLFALLKKTLKRRPDMKVIVTSATLDADKFSAYFNECPIFTIPGRTFPVEVLYSREPE
SDYLDTALVTVMQIHLTEPKGDILLFLTGQEEIDTACEVLFERMKALGPNVPDLIILPVY
ASLPTEMQSRIFDPAPAGSRKVVIATNIAETSITIDEIYYVVDPGFVKQNAYDPKLGMDS
LVVTPISQAQANQRAGRAGRTGPGKCFRLYTEAAYQSEMLPTTIPEIQRQNLSTTILMLK
AMGINDLLHFDFMDPPPINTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPSLAKVL
IAAVDLDCAEEVLSIVSMLNIPTVFYRPKEKQSQADQKKAKFHDPHGDHLTFLNVYNSWK
TSGYSAPWCFENFIQARSMRRAKDVRDQIVKIMDRYKHPIKSCGRATEKVRRALCAGFFR
NAARKDPQEGYKTLIEGTPVYLHPSSALFGKQAEWVIYHELVLTSKEYMHCTTSIEPKWL
VEAAPTFFKVAPTDRLSKRKKAERIQPLYNKFATEDDWRLSAQRKGGRGGGGGGTWG
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggatgacttgctgaatctcgagcttttgtcccttgtttcaaaggtgacatcagaagtt
cagaatcatttgggtgttggcgaaaaaactgtagctgagttcctgattgccaaacgtaca
gaatgcaatagcttcgacgaattccgcgacaacctcgagacgaccactcccggtttgcct
cccagtcttgttgaaagtatagaccgactggtacttgctttgcaccccaagtttaaaggt
aaagcgaaaggtgaacccaaggaacactcatcccgaacccttcaagaaaaggaaaaggtc
tttagcggtcttgcgctacccgacaaggaacctgcccgcgacgatggagccgatgcaatt
gacgataccctcgcgctcctggagggcctagaaccaaaggcgaaaaaggaaaaacccacg
agaaaacgaagccgaagccctgagaacgatcaaaaagagtctaggagaaggagaagagat
agatcccgctcgagggaacgacgaaagcgagacaagtatcgatcaaggtcacgatcgcaa
gaacgaggcgacgaagattggcgcgacggacaccgcgattcgcgcaaagatcgacgaggt
cgtagacgacacgatgatgacgatcgattccgcaatgccccggcgcccgaaatagacgat
gcaccgcagcttcacaaggtctatcaaggccatgtcacagggttgaaagattttggtgcc
tttgtcaatttacacaacgtcaaaggaagaattgatggcctggttcacgtgtctcgaatg
tctgcaggggagcgcgtcaaccatccctccgatttggttacgcaaggacaggaagtttgg
gtcaaagttacaagtcttgacaaggaccaaaacggccgcgatcgagtgggattatcgatg
aaggatgttgatcaacagagcggacaggacttggagccacaagttcgtatgtcgacaggc
gccaacatggaagccctgggaggcgcacttggaggcgcaagagacggatttgcagagcca
agcgggcctcgaaatgatatgggtcccccacgacgacaaaagaagcgaatgacttctcct
gaaagatgggaaatccgacaattgattgcatctggagtggccaaggcttctgactatccc
gacctggaggaagactacaacgcaactctccgtggtgatggcgagatggagctagaagag
gatgtcgatattgaagttcgagaggaagaaccacctttcttggccggacaaaccaagcag
tctcttgagctgtcacctattcgcgtcgtcaaggcacctgatggctctatgaaccgagcg
gcaatgtcaggcaccaacttagcaaaagaacgcaaggagctcaaacaacaagaggccgat
gctgctgccaaggacgaacctaaagagaatctctctcagcaatggcaagaccccatggct
gatcccgacaagagaaagtttgctagcgatttgcgaaatgccagaaagaaccagactgcc
gaggatgtccctgagtggaagaaggctgtcattcccaagggtcagtctctgggcaagcgt
acgaatatgagcatcaaagatcagagagagtctctgcctgtatttgccttccgcactcaa
ttgatcaaggctgtccacgagaaccagattcttattgttgtcggagagacaggatctgga
aagactacacagttgacacaatatcttgctgaagctggtttcgccaacgatggcatgatc
ggttgtacgcaaccccgtcgtgttgccgccatgtccgtcgccaagcgtgtagctgaggaa
gtcggctgcaagctcggcgaagaggtcggatacacgattcgattcgaggactgtaccagc
ccttccacaaagatcaagtacatgaccgacggtatgcttcaaagagaaattctggttgac
cccgacatgtctcgatactcatgtatcatgcttgacgaggctcacgaacgtactatcgcc
actgatgtactgttcgctctccttaaaaagaccctaaagcgtcgtcctgacatgaaggtt
attgtcacctcagcgacacttgacgcggacaaattctctgcatactttaacgaatgtccc
atttttactatccccggtcgaacctttcccgtcgaagtactttactctagggaacccgaa
tctgattacctggatactgcgcttgtcacagtcatgcaaattcatcttaccgaacccaag
ggcgatattcttctcttcttaacaggtcaagaagaaattgacacagcttgtgaggtcttg
tttgagagaatgaaagctttgggacccaacgtaccagatttgatcattctacctgtctat
gcgtcgcttccaaccgaaatgcagagtcgaatttttgatcccgcccctgctggtagtcgc
aaggttgtcattgccaccaatatcgcagagacctccattactattgacgagatttactac
gtcgtcgatccaggtttcgtcaagcaaaacgcctacgatcccaagcttggtatggactca
cttgtcgtcacgcctatttcccaagctcaagcaaaccagagagctggccgtgctggccga
acaggtcctggaaagtgtttccgcctgtataccgaagcagcgtaccagtctgaaatgctt
ccgaccactatccctgaaatccaacggcagaacctgtccaccacgattcttatgctcaaa
gccatgggtattaatgacctccttcactttgactttatggacccgcccccaattaatacc
atgcttaccgcgttggaggagctatatgccctgagtgctctcgacgacgaaggtctgctc
actcgtttgggacgaaaaatggccgactttcctatggaaccttctctcgccaaggttctc
atcgctgctgtcgatcttgactgcgccgaagaagtgcttagcattgtgtccatgctgaac
atccccaccgtcttctaccgacccaaagaaaagcagtcccaggcagaccaaaagaaggcc
aagttccacgaccctcacggtgatcacttgactttcctcaatgtgtacaactcttggaag
acgagtggctactcagcaccatggtgttttgagaacttcattcaggcgcgatcaatgcgt
cgagccaaggatgtccgcgatcaaatcgtcaagattatggaccgatacaagcaccccatc
aaatcatgtggtcgcgctacagaaaaggtccgccgggctctctgcgcaggtttcttccgt
aacgccgcccgcaaggatccccaagagggatacaagacccttattgagggtactcccgtc
tatttgcatcctagctccgcactcttcggcaagcaagccgagtgggtcatctaccacgaa
cttgtcctcacaagcaaggagtacatgcactgcacgactagcattgaaccgaaatggctc
gttgaggctgcgccaacattcttcaaggtcgcacctactgataggttgagtaagaggaag
aaggcggagagaatccagccgctgtataataaattcgctacagaggatgattggcgattg
agtgcgcagaggaagggtggtagaggtggtggtggtggaggtacttggggttag
DBGET
integrated database retrieval system
