Fusarium verticillioides: FVEG_00894
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Entry
FVEG_00894 CDS
T04869
Name
(RefSeq) hypothetical protein
KO
K12609
CCR4-NOT transcriptional complex subunit CAF120
Organism
fvr
Fusarium verticillioides
Pathway
fvr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fvr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FVEG_00894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fvr03019
]
FVEG_00894
Messenger RNA biogenesis [BR:
fvr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
FVEG_00894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
PH_9
Motif
Other DBs
NCBI-GeneID:
30059228
NCBI-ProteinID:
XP_018743342
UniProt:
W7LCA1
LinkDB
All DBs
Position
1:3549963..3556859
Genome browser
AA seq
1386 aa
AA seq
DB search
MGRNRVLSFMSQFSAGTKTPPPSTSPPSNSPHRPGHRKTNSGTEPFPDHRVSTDISRPNT
PPSRPDYGTPINGGSPIEPSARRRRSSSAASSRPPSMVLAHQPPIMDITEDTIPELQPIF
SFLNSHSNKLYQEGYFLKLDDQNTQGKPNPDRTWTECFAQLVGTVLSLWDAAELDAAGED
GEVLPKFINLTDASIKMIESLPTRSSDEQPLQNILSISTAGRNRYLLHFNSRHSLLQWTA
GIRLAIFEHSSLQEAYTGALIAGKGKSLNNIGVIMERARFPTEEWVRVRFGAGVPWRRCW
CVITPPDEKQYAKLQKELKKRSPYDRSPVPTLKGDIKFYDQRKDGKKQKKMQPIATITDA
YSAYAIYPQSKSLIDASTLLKVEGNIAIHTDPPSSTEGFVFIMPETHPAVSGFEMLMRFL
FPTWDTFGLYGRPGRLVASTLDSRSLMFAMPKSRRYGYLENLDVSNLILEDGSSGWGERD
WRKKLKECTGTRMNAVDDAPTTRSRSNSRKSVRLSFGDGPPKPKAGFSDEQVPTRSSRSF
SLTERTRTDSAPADPARVAFGGHGRNSSDPNQLGGPPFRPGTNENSPYSGSPRRGQTPVG
APHHNQTSRDESPAYQNERAPSGSPPLKDLDGMRQMHTPEPVSQPPAFSHGSQARPVSRA
YHSPELRRANSRLSVTTLAQLATAGGLGGPNDSNPSPRGDEVDAARSGPSVLPPHANSVG
ISANDNRSREALSPLNQDPSSNSLPPPANLSQQRSRSPLAQPPLGPPNAYGRGPNSRPGT
SEGRRSPMPPGMPPQQRPPHPQNTNRRPDMGPDGRRPSDPRGPGFDGRRPSDPRGRGNGP
PPGHMPPPHGPHGNFRPGPGRSGPPGPPPGYRPNGPPHGPPNGPPGLKGYRKPVPGGPPP
PAPFENSKGNTMSGSSGITTNEIIDHYAFDQGRQTPRQGTPNSERRPGPPGRQESHTSNQ
SSHYEDNSPTSSLKNFVDTYQYSEPKPRAGVLKTVGGAEEPDPRDPGFDIPDINFGPTIN
YAAIKDRSKTPGALTPGGSSQRPHTPGGQGPTPPPHKSSGSQGSLGRKESPDPKRTMAWQ
PGASTPPSNAHGLSPEEFVQQRAAHARSASSNTLGGSPSPGMKRTSSSDMLQAIQNGRHS
RSSSADLLARPGSRGASSTLNFASSGETSSHLSAREQEHVARLTGQPLISMPGHQRQGSQ
GSFMPGHQRQASSGSGLVGAIEAREREKQQMKQGVNSQAVQHAISQRQQQQAAMAYQQQM
AQQQMAQQQMMQQQVAQQQQIAYQQQAHQQQNYQQGYQQPMMGAGTIPPYSPMGQPAGQY
TPGGSPYGPAPQQMGGHGQPNSFSRPLRAAQQVDPRFVPPQGQYGPSPGAQQTARNVHPQ
YQGQAF
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgaaatcgagtcctctcttttatgtcccagttctctgcgggcacaaagacaccg
ccgccctcaacttctcctccgtcaaactcacctcacagaccggggcatcgcaagacgaac
tctggtacagaaccctttcccgaccaccgagtcagtaccgacatttctcggccaaataca
ccgccttcgcggccagattatggcactcccataaacggcggctccccgatcgaaccttct
gctcgccgaagacgcagctcatctgctgcatcatcacgacccccgtccatggtcctggct
catcaaccacccatcatggatatcacggaggatacaatccccgaactgcagcccatcttt
tcattccttaacagccattccaacaagctgtaccaagagggttatttcctcaaactcgat
gaccagaatacacagggtaaacccaaccctgatagaacttggacagagtgttttgcccag
ctagtgggaaccgtcttgtcactatgggatgccgcggaactagatgcggctggagaagac
ggcgaagtcttacccaagtttatcaacttgacggatgcctcgatcaaaatgattgagtcg
ctgcctacaagatcttcagatgagcaaccgctacagaacatcctgagcatctcaacggct
ggaagaaacagatatctcctccatttcaactcgcggcactcgctgctgcaatggactgct
ggcattcgactagctattttcgagcactcttctctgcaggaggcttatactggcgctctg
attgccggcaagggcaaatcgctcaacaatattggtgtcatcatggagagggcacgattc
cccaccgaagaatgggttagagtccgattcggcgctggtgtaccttggagaagatgctgg
tgtgttatcaccccccctgacgaaaagcagtatgcaaaactccagaaggagctcaagaag
aggtctccttacgatcgatcgcctgtgcccacactcaagggagatatcaaattttacgac
cagcggaaggatggtaagaagcagaagaagatgcagccaattgctaccatcaccgacgcc
tactctgcctatgccatctatcctcagtccaagtcattgattgatgcgtcgaccttactc
aaggttgagggtaacattgctattcatactgatcctccctcgtctaccgaagggttcgtc
ttcatcatgcctgagacacaccctgctgtgagcggattcgagatgctgatgcgtttcctc
tttccaacctgggatacatttggtctttacggccgacctggtagacttgttgccagcaca
cttgactccaggtctctcatgtttgctatgcctaagagccgccgctatggttatcttgag
aatttggatgtttccaacctcattcttgaggatggtagctctggatggggcgagagagat
tggagaaagaagctcaaggaatgcactggtactcgcatgaatgctgtagatgatgcaccc
acgacacgttctcgaagcaacagtcgaaagagtgttcgactaagctttggtgatggacct
ccaaagcccaaggccggattttcagatgaacaagttccaaccagatcctcgcgatcattc
tctcttactgagcgcactcgaacagactcagctcccgcagatcctgcgagggttgccttt
ggaggacatggccgtaactcatccgaccccaaccaattgggaggccctcctttccgtcct
ggtaccaatgaaaatagcccttactcaggctcgccacgacgtggacaaactcccgttggc
gctccacaccataaccaaacttcccgtgacgagagtcccgcttaccagaatgaacgagct
ccctctggctctcctcccctgaaagacttggatggcatgcgtcagatgcatactcctgaa
ccagtctcacaacccccagccttcagtcacgggtctcaggctcgccccgtcagcagagct
taccattcccctgagcttaggcgggctaatagtaggctttccgtcacaactctggcccag
cttgccacagctggcgggttaggtggcccgaacgattcgaatccttctccacgaggagat
gaggtggacgctgcaagatctggaccatcggtactgccaccacacgccaactccgtaggg
atatctgctaacgacaaccgctcgcgtgaagctttaagcccactgaatcaggatccctct
tccaacagtcttcctcctccggcaaacttatcccaacaacgatcacgatcgccactggcc
cagcccccgcttgggcctcctaatgcctatggccgcgggcctaactcacgtcctggaact
tcagaaggacggcgatctccgatgcctcccggcatgccacctcaacaacgacctccccat
cctcaaaataccaaccgtcggcctgacatgggccctgatggccgccgaccgtctgatcct
cggggtcctggatttgacgggcgtagaccttcagaccctcgaggtcgtggcaatggtcct
cctcctggccatatgcctccgccacatggtccccatggtaattttcgtcccggaccgggg
cgctccggacctcctggaccacctccgggttatcgccctaacggacctcctcatggaccg
ccaaatggaccaccggggctcaagggttatcggaagcctgtgccaggcggacctccacca
cctgctccttttgaaaattctaagggtaacaccatgtcgggtagcagtgggatcaccacg
aatgagataatcgaccattatgcgttcgaccaaggtcgtcaaacacctcggcaaggcacc
cctaactcagagaggcgaccaggacccccaggcaggcaagaaagccacacgagcaaccaa
agcagtcattatgaggataattctcctaccagcagcctcaagaactttgtagatacatac
caatacagtgaaccaaagccccgagctggtgtcctgaagactgtcggtggcgctgaggag
cctgatcctcgagatcctggctttgatataccagatatcaatttcggtccgactattaat
tacgcagcaatcaaggaccgcagtaaaactcccggcgctctgactcccggtggctcatca
cagagaccgcatacacctgggggtcaaggaccaacgcccccgcctcataaatcttcgggt
tctcagggatctcttgggcgtaaggaatctccagacccaaagcggactatggcatggcaa
cccggcgcatcaactcccccgagcaacgcacacgggttaagccccgaagaatttgtgcag
caaagggcggcccatgctcggagtgcttccagcaacacgttgggcggctcacccagccca
ggcatgaaacgaactagttcctctgacatgctacaagctatccagaacggtcgccactct
cgcagcagctctgctgatctgcttgcacgacctggatcgcggggtgctagttcgaccttg
aactttgcaagctctggggagacatctagccacctcagtgctcgggagcaggagcatgtt
gctcgccttacaggccaaccgttgatcagcatgccaggacatcagagacagggttcacag
ggtagttttatgcctggccaccagaggcaagcttcctctggatcagggttggttggtgct
atcgaggcccgggaacgggaaaagcaacagatgaagcaaggagtgaatagccaggcagtc
cagcatgcgatcagccagcgtcagcagcaacaggctgccatggcgtaccagcagcaaatg
gcacagcaacaaatggctcagcagcaaatgatgcaacaacaagtggctcagcagcaacag
attgcgtaccagcagcaggctcatcaacaacaaaactaccagcaaggatatcaacagcca
atgatgggtgctggaactattcccccatacagccccatgggccagccagctggtcagtac
actcctggtggatctccgtacgggccggcacctcagcagatgggagggcatggacagccg
aacagtttctcgcgaccgcttcgggctgcgcagcaggtcgaccctcgctttgtaccacct
cagggtcaatacggcccatcgcctggagctcagcagaccgctcgaaacgttcatccccag
tatcaaggacaagcgttttag
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