Fusarium verticillioides: FVEG_09212
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Entry
FVEG_09212 CDS
T04869
Name
(RefSeq) pre-mRNA-splicing factor spp42
KO
K12856
pre-mRNA-processing factor 8
Organism
fvr
Fusarium verticillioides
Pathway
fvr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fvr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FVEG_09212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fvr03041
]
FVEG_09212
Spliceosome [BR:
fvr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
FVEG_09212
Complex C
U5 SnRNP specific factors
FVEG_09212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
RRM_4
PROCT
Motif
Other DBs
NCBI-GeneID:
30066887
NCBI-ProteinID:
XP_018756025
UniProt:
W7MPY9
LinkDB
All DBs
Position
5:3572183..3579735
Genome browser
AA seq
2369 aa
AA seq
DB search
MSQLPPPPPPGWGPPPPPPPPSSSLPPPPSTPAPPPPGFRPPTDPMMAKFAQKKNEWVRS
RRNRFGEKRKGGFVQTQKADMPPEHLRKIVKDIGDVSQKKYTNDKRSYLGALKFMPHAVL
KLLENMPMPWESAREVKVLYHVNGCLTLVNEIPRVIEPVFFAQWAMMWTFMRKEKADRRL
FKRMRFPPFDDEEPPLSWAENLEDVEPLEPIQMELDEEDDEAVYEWFYDHRPLLDTPHVN
GPSYKAWNLTLPQMATLFRLSRPLVSDVVDKNYFYLFDLKSLLTAKALNVALPGGPRFEP
LYKDIDPNDEDFGEFNAIDRIIFRNPIRTEFRVAYPYLYNSLPRSVHLSWHSHPQVVFNR
ADDPDLPTFHFDRRINPISSRTVAPKNVEVSHEDEIFGAGNIEESEDDAFELPAGVEPFL
ADEDIENENTSSAVELWWAPYPFDRRSGRMVRAQDVPLVKQWYLEHPPSDRPPVKVRVSY
QKLLKNFVLNELHKKKPKAQNKQNLMRSLKQTKFFQQTTIDWVEAGLQVCRQGFNMLNLL
IHRKNLTYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLMREILRLTKLIVDAQVQYRLG
NIDAFQLADGILYAFNHVGQLTGMYRYKYKLMHQIRTCKDLKHLIYYRFNSGPVGKGPGC
GFWAPAWRVWLFFMRGIIPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRA
SVMADLMDMMPEGIKQNKVNTVLQHLSEAWRCWKSNIPWKVPGLPAPIENIILRYVKSKA
DWWISVAHYNRERIRRGATVDKTVAKKNVGRLTRLWLKAEQERQHNHMKDGPYVSSEEAI
AIYTTTVHWLESRKFSPIPFPSVSYKHDTKILILALERLREAYSVKGRLNQSQREELALI
EQAYDSPGTTLERIKRFLLTQRAFKEVNIDMNDNYSTINPVYDIEPIEKISDAYLDQYLW
YQADQRHLFPAWIKPSDSEVPPLLVYKWAQGINNLDRVWQTENGECNVMIETELSKVYEK
MELTLLNSLLRLIMDHNLADYITAKNNVQLTYKDMNHVNSYGMIRGLQFSAFVFQFYGLV
LDLLLLGPQRASEIAGPPQSPNDFLQFRDRETESSHPIRLYTRYIDKVWIFLRFTAEESR
DLIQRFLTEQPDPNFENVIGYKSKKCWPRDSRMRLMRHDVNLGRAVFWDMKNRLPRSVTT
IEWDESFVSVYSRDNPNLLFSMCGFEVRILPKIRNQNEEFPVKDSVWSLVDNTTKERTAH
AFLQVTEEDIQKFNNRIRQILMSSGSTTFTKIANKWNTALIALFTYYREAAVSTVDLLDT
IVKCETKIQTRVKIGLNSKMPSRFPPAVFYTPKELGGLGMISGSHILIPASDKRWSKQTD
TGVTHYRAGMTHDEETLIPNIFRYIIPWEAEFIDSQRVWTEYSQKRLEANQQNRRLTLED
LEDSWDRGLPRINTLFQKDRSTLSFDKGFRARAEFKIYQLMKNNPFWWTSQRHDGKLWNL
NAYRTDVIQALGGVETILEHTLFKATGFPSWEGLFWEKASGFEESMKFKKLTNAQRSGLN
QIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFLHGKIPTLKISLIQIFRAHLWQKIHE
SVVMDLCQVFDQELESLGIETVQKETIHPRKSYKMNSSCADILLFSNHKWNVTRPSLLYD
TKDVIEQTTTNKFWIDVQLRYGDYDSHDIERYTRAKYLDYTTDSASIYPSATGLMIGIDL
AYNLYSAYGMYFPGLKVLVQQAMAKIMKANPALYVLRERIRKGLQLYASESNQEFLNSQN
YSELFSNQTQLFIDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVW
AGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQLIVTRKGLLDPLEVHLLDFPNISIRAS
ELQLPFQAAMKVEKLGDMILRATEPQMVLFNLYDEWLKSISSYTAFSRLVLILRALHVNP
DKTKLILRPDKTVITHEHHIWPSLSDEDWIKVETQLRDLILNDYGKKNNVNVSSLTTSEV
RDIILGMEISAPSMQRQQAAEIEKQQQEQAQLTAVTTKTQNVHGEEIIVTTTSQFEQQTF
ASKTEWRTRAIATSNLRTRAKNIYVSSVDNDLDDITYVMPNNILKRFITIADLRVQVAGY
LYGSSAPDNDQVKEIKCIVMIPQIGGLRNVQLPQQLPQSEFLEGMEPLGVIHTVSGSELP
YMSAMDVTEHSKLLDAHNEWDKTNTVTVSVAFTPGSVSLSAWGLTPAGYKWGAENKDTQS
DQPQGFTTTMGEKRKLLLSPRFRGFFLVPDDGKWNYSFMGNAFAGMEKRPVHVKLDTPLP
FYSDQHRPVHFVNFAELEDIWVDRSDNFA
NT seq
7110 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaacttcctccgcctcctcccccaggatggggacctcctcctccacctcctccg
ccttcctcttctctgccgcctcctccttcaactccagctcctcctcctccaggctttcgt
cctcccaccgatccgatgatggccaaatttgcccagaagaagaacgagtgggtgagatca
cgacgaaaccgcttcggagagaagcgcaagggcggtttcgttcagacgcagaaggctgac
atgccccccgaacatttacggaagattgtcaaggacataggcgatgtgtcccagaagaaa
tacacaaacgacaaaagaagctatctaggggccctgaagttcatgccacacgcagttctg
aagcttctcgagaacatgccgatgccatgggaatcggcgcgagaagtcaaggtgctctat
catgtaaacggatgcttgactttggtcaacgagatcccgcgtgttatcgagcctgtcttc
tttgcgcagtgggctatgatgtggacatttatgcgcaaagaaaaggccgacagacgacta
ttcaagcgcatgcgattcccgcctttcgacgacgaagagcctcccctgtcgtgggctgaa
aacttagaggatgttgagccacttgagccgattcagatggagttggacgaggaagatgac
gaggccgtatatgaatggttctacgatcacagacccctcctggacacaccgcacgtcaac
ggcccaagctacaaggcctggaacctcacactccctcagatggcaacacttttccgtctg
agtcgaccacttgtttctgatgtcgtcgacaagaactacttctatctcttcgaccttaag
agcttattaacagccaaggctctcaacgtcgctcttcccggcggtcctcgtttcgaacct
ctgtacaaggatatcgaccccaacgacgaagacttcggcgagtttaatgcgattgatcgt
atcattttccgaaatcccattcgaaccgagttcagggtcgcctacccgtacctctataat
tcgctaccaagaagtgttcatttatcgtggcactcacacccccaggtcgtatttaatcgt
gcggatgatcctgatctcccgacattccacttcgatcgtcgcatcaaccccatctcgtcg
cgaaccgtcgcacccaagaatgtcgaggtttcccacgaggacgagatatttggcgctggt
aacattgaggagtccgaagacgatgcctttgagctgcctgctggagtggagccgttcctt
gccgacgaggatatcgagaatgagaacacatcatccgctgtcgaactttggtgggcgcct
tacccatttgaccgacgatccggacgcatggttcgagcacaagatgtgcctctcgtcaag
cagtggtacctcgagcatcctccctcggatcgacctccagtcaaggtccgagtctcgtac
cagaaactcctcaaaaacttcgtattgaatgaattgcacaagaagaagcccaaggcgcaa
aacaagcagaacttgatgcgatcactcaagcaaaccaagttcttccagcagacaaccatc
gattgggtcgaggctggtctgcaggtttgtcgccagggtttcaacatgctcaacctcctt
atccaccgcaagaacttgacgtatcttcacctcgattacaactttaatttgaagcctgtc
aagaccttgaccaccaaggagcgaaagaagtcacgtttcggaaacgctttccatctcatg
cgagagatcttgagacttacaaagcttatcgttgatgcccaggttcagtacagacttgga
aacattgacgccttccagcttgcagatggtatcttatacgccttcaaccacgttggtcag
ctgacgggcatgtaccgatacaaatacaagctgatgcaccagattcgaacttgcaaggat
ctgaagcatctcatttactaccggtttaattctggacctgtcggtaagggtcctggatgt
ggtttctgggctcctgcttggagggtttggcttttcttcatgcgaggaattattcctttg
ctcgagagatggttaggaaatcttttgtctcgtcaatttgagggtcgacacagcaagggt
gttgcaaagacagtcaccaagcaacgtgtggagtcccatttcgatttggagctccgcgca
tccgttatggctgatcttatggacatgatgcccgagggtatcaagcagaacaaggtcaac
accgtgcttcagcatttatctgaggcctggagatgttggaagagtaacatcccctggaag
gttccaggcttgcctgcacctattgagaacatcattcttcgatacgtcaaatctaaggcc
gattggtggatctcagtcgcccactacaaccgtgagcgtattcgacgaggagctaccgtt
gataagactgtcgccaagaagaacgtcggtcgtttgactcgactttggctcaaggctgag
caagaacgccagcacaaccacatgaaggatggcccttacgtgtcctccgaagaagccatt
gccatctacacaactaccgtgcattggcttgagtctcgcaagttctcgcctattcccttc
ccgagtgtttcttataagcacgacaccaagatcctcattcttgcgcttgagcgccttagg
gaggcatattcagtgaagggccgtctcaaccagagtcaacgagaggaattagctctgatt
gagcaagcatatgatagccctggaaccacactggagcgaatcaaacgatttttgcttacc
cagcgagctttcaaggaagttaacattgacatgaacgacaactacagcaccatcaaccct
gtctacgatattgaacctatcgagaagattagcgatgcttacctggatcaatatttgtgg
tatcaagcagatcagcgacatcttttccctgcctggatcaagccatcggattccgaggtc
ccgcctttgcttgtttacaagtgggcacaaggtatcaacaacctcgaccgtgtgtggcag
actgagaatggcgaatgcaatgtcatgattgagacggaactatccaaggtttacgaaaag
atggagctcacgcttctgaactctcttctcaggctgattatggaccacaatttggcagat
tatattacagccaagaacaacgtccagctcacctacaaggacatgaaccatgtcaacagt
tatggcatgatccgtggcttacagttctctgcatttgtgttccaattctacggtcttgtg
ttggatcttctgcttctgggccctcagcgagccagcgagattgctggaccacctcaaagc
cccaacgacttcttgcaattccgtgaccgcgagactgagtccagtcatcctatccgactg
tacactcgatacatcgacaaggtttggatcttcctccgatttactgctgaggagtctcga
gatctcatccaaagattcctcacggaacaacccgaccctaactttgagaacgttattgga
tacaagagcaagaagtgctggccaagagattctcgcatgcgtctgatgcgccatgatgta
aacctcggacgagcggtcttctgggatatgaagaaccgtctgcctcgatctgttacaacg
attgagtgggatgaaagctttgtcagcgtttacagccgtgataacccgaacttgctcttc
tctatgtgtggtttcgaagtccgcattctccccaaaattcgcaaccagaatgaagaattc
cctgtcaaggacagtgtgtggtctctcgttgacaacaccacaaaggagaggacggcgcac
gctttcctacaagtcaccgaggaggatattcagaagttcaacaaccgtattcgacagatt
ctcatgtcttcaggttctacaactttcaccaagatcgccaacaagtggaacacagcattg
atcgccctcttcacttattatcgtgaggcagctgtatcgaccgtcgacctgcttgataca
attgtcaagtgcgagaccaagattcagacccgagtcaagattggtcttaactccaaaatg
ccttctcgtttccctcctgccgtcttctacacccccaaggagcttggtggtcttggtatg
atttcgggctcacatatccttattcctgctagtgataagcgttggtcaaagcaaaccgac
actggcgttactcattacagggcaggaatgacccacgatgaggagaccctcatcccgaat
attttccgatacatcattccttgggaggccgagttcatcgactctcaacgagtctggaca
gaatattctcagaaacgtcttgaagccaatcaacagaaccgtcgtcttactctcgaggat
ctcgaggatagttgggaccgcggtcttcctcgaatcaacaccctgttccaaaaggatcga
agcactctgagcttcgataagggtttccgagctcgagctgagtttaagatctatcaattg
atgaagaataatcctttctggtggactagtcaacgtcatgatggaaaattgtggaacctg
aacgcttatcgtaccgatgtgatccaggcgttgggtggtgttgagaccatcctcgaacat
acccttttcaaggcaacaggtttcccttcatgggaaggcctcttttgggaaaaggcctcg
ggttttgaagaatctatgaagttcaagaagttaactaatgctcaaagaagtggtttgaat
caaattcctaaccgtcgcttcactttgtggtggtcacccaccatcaaccgagccaacgtc
tacgtgggtttccaggtccagcttgacttgacaggcattttcttgcacggaaagattcct
actctgaagatctcgcttatccagatcttccgagctcatttgtggcagaagattcatgag
tctgttgttatggatctttgtcaggtatttgaccaggaactggaatctctcggcattgag
accgttcagaaagagactatccatcctcgaaagtcttacaagatgaacagttcttgtgcc
gatattcttctcttctctaaccacaagtggaatgtgaccagaccttcacttctttacgat
accaaggacgttattgagcagacaactaccaacaaattctggattgatgttcagctccga
tatggcgattacgactcacacgacattgaacggtacacacgtgccaagtatctcgactat
acgactgacagtgccagtatctacccctcagctactggtctcatgattggcattgatctt
gcctacaacctctactctgcttatggcatgtatttccctggtctcaaggttcttgtgcag
caggctatggccaagatcatgaaggccaatcccgctctgtacgttttgcgcgagcgtatc
cgaaaaggtctacagctctacgcttctgagagtaaccaggagttcttgaactcccagaac
tactcggaattgtttagcaaccagacgcagttgtttatcgatgacaccaacgtctaccgt
gtcaccattcacaagacctttgagggtaatttgacaaccaagcctatcaacggtgctatc
ttcatcttcaacccaagaaccggacagctcttcctcaagatcattcacactagtgtctgg
gctggacagaagcgtcttggtcagctcgccaagtggaagacggccgaagaagtcgctgct
ctgatccgatcattgcccgtggaagaacaacccaagcagctgattgtgacaagaaagggt
cttttggatcctctcgaagtccacttgctcgacttccccaatatttctattcgggcctca
gagcttcagcttcccttccaggcagcgatgaaagtggagaaacttggtgacatgattctt
cgtgccactgaacctcagatggtgcttttcaacctgtacgatgagtggctgaagagtatt
tcatcttacaccgccttctctcgtcttgttcttatcctacgcgcgctccacgtcaaccct
gataagaccaagctcatcctccggcctgacaagactgtcatcacacatgagcaccatatt
tggccatcgctgtcagatgaagattggatcaaggttgaaacgcagcttcgagatcttatc
ctgaacgattacggcaagaagaacaatgtcaatgtctccagcttgacgaccagtgaagtg
cgagacattatcctgggtatggaaatttcggccccatcaatgcaacgacaacaagccgcc
gagattgagaagcaacaacaagagcaggcacagttgacggctgtgactacgaagacccag
aacgtccatggcgaagagatcattgttaccacaacttcgcagttcgagcagcaaacattt
gcctccaagactgagtggcgaacacgagccattgctacatccaacttgcgcacacgagca
aagaacatttacgtctcgtcggttgacaatgatcttgacgatattacctacgtcatgcca
aacaacattctgaagcgcttcatcactattgctgaccttagagttcaagtggccggttac
ctgtatggttcttctgcccccgacaacgaccaggtcaaggagatcaagtgtatcgtcatg
atcccccagattggcggcctccgcaatgtgcaattgccccagcaacttcctcagagcgag
ttccttgaaggaatggagcctctgggtgtgatccacacggtctctggcagcgaactacct
tacatgtctgccatggatgtgacagaacactcaaagctcctcgatgcgcataatgagtgg
gacaagaccaacacggtcacggtatcggttgcattcacacctggcagtgtatctctatcg
gcgtggggccttacaccagcaggctacaagtggggagctgagaacaaggacacacagagt
gatcaacctcaaggatttactacaacaatgggtgagaagcgaaagctgttgctgagccca
cggttcaggggattcttcttggtaccggatgatggcaagtggaactacagctttatgggc
aacgcgtttgctggaatggagaagaggcctgtccacgtcaagctggatacgccactgccg
ttctatagcgaccagcacagaccagtgcatttcgttaactttgcggaactggaggatatt
tgggtggaccgatcggataactttgcttaa
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integrated database retrieval system
