Candidatus Formimonas warabiya: DCMF_08875
Help
Entry
DCMF_08875 CDS
T07208
Name
(GenBank) RNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
fwa
Candidatus Formimonas warabiya
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fwa03009
]
DCMF_08875
Enzymes [BR:
fwa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
DCMF_08875
Ribosome biogenesis [BR:
fwa03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DCMF_08875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Ub-Mut7C
Motif
Other DBs
NCBI-ProteinID:
ATW24869
UniProt:
A0A3G1KQW6
LinkDB
All DBs
Position
complement(1887172..1888098)
Genome browser
AA seq
308 aa
AA seq
DB search
MTETIFQATGAELGIRIDLYLADKVSDLSRSRIQKLIKDGEVLVNGKTVKPNYAVAEGDE
ILIGIPQPEQLQLAAQEIPFEVLFEDQDLIVVNKPQGMVVHPAAGNYQGTLVNALLHHCT
DLSGINGVMRPGIVHRIDKDTSGLLMVAKNDFAHMNLAKQIKDHAITRVYNALVHGTVAE
PAGVIDAPIGRHPVHRKKMAVVLKNSKRAVTHYKVLERFSEYTLIEARLETGRTHQIRVH
MSYLGYPVVGDPLYGPRKGNLDLKGQALHARVLGFHHPRSGAYMEFEAPLPPYFQELLQD
LRNHQVKK
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
ttgactgagacaatttttcaggcaaccggtgcggagctggggatccgcatcgatctctat
ttggcagataaagtgagcgatctttcccgctcccggatccaaaagctgatcaaagacggg
gaagtgctggtaaacggaaaaaccgtgaaacccaattatgccgtggcagagggggatgaa
attctcatcggcatcccccaacctgaacaactgcagctggcggcccaagagattcccttt
gaggttctttttgaagatcaggacctgattgtggtcaataaaccccaagggatggtggtt
catccggcggcgggaaattatcagggcaccctggtgaacgccctcctgcatcactgtacg
gacttgtcgggaatcaacggggtgatgcggccgggaatcgttcaccgcatcgataaagat
acctccggacttttgatggtggcgaaaaatgattttgcccatatgaacctggcaaaacag
atcaaagaccatgcgattacccgagtttacaatgccctcgtacacggaaccgtggcggag
ccggcgggcgtgatcgatgcgcccatcggacggcacccggtgcaccgaaaaaaaatggcc
gttgtgctgaaaaattccaagcgggccgtcacccattacaaggtcctggaaagattctcc
gaatataccttgatcgaagccagattagaaacaggccggacccaccaaatcagggttcat
atgagttatttaggctacccggtcgtgggagaccccctgtacgggccgcgcaaagggaat
ttagacctgaaaggtcaggcgctgcacgcccgggtgttaggctttcatcatccccggtcc
ggagcctatatggagtttgaagctcctttgcccccatactttcaagaattgctccaggac
ttacgaaatcatcaggtaaaaaaataa
DBGET
integrated database retrieval system
