Candidatus Formimonas warabiya: DCMF_23555
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Entry
DCMF_23555 CDS
T07208
Name
(GenBank) glycine--tRNA ligase subunit beta
KO
K01879
glycyl-tRNA synthetase beta chain [EC:
6.1.1.14
]
Organism
fwa
Candidatus Formimonas warabiya
Pathway
fwa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fwa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DCMF_23555
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fwa01007
]
DCMF_23555
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fwa03016
]
DCMF_23555
Enzymes [BR:
fwa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
DCMF_23555
Amino acid related enzymes [BR:
fwa01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
DCMF_23555
Transfer RNA biogenesis [BR:
fwa03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DCMF_23555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
DALR_1
HD_5
DUF2552
Motif
Other DBs
NCBI-ProteinID:
ATW28853
UniProt:
A0A3G1L232
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All DBs
Position
5169867..5171945
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AA seq
692 aa
AA seq
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MAKDLLFEIGTEEIPARFMASALKQMKELGESSLKEARLAFSHIHVYGTPRRLALLVEGL
AEKQADVQEEVKGPSEKAAFDGEGNPTKAVLGFARGQGVEVKDLAIKETPAGKYVFATKK
AAGQGAETVLPGILLNLVHKLYFPKPMRWGDLEMRFARPIRWMVALFGNEVLPVEVEGLK
AGRESRSHRFLGQGIVELASPDQYIPKLKENYCIVDQNERKQLIWQQIQETAGKSGGQVL
PDDELLEEVTYLLEYPTALCGGFEEKYLALPKEVLITPMREHQRYFPVLKEDGSLLPKFI
TVRNGLAEHLDIVTAGNEKVLKARLADAEFFYTEDLKKNLADHVPKLESIVFHERLGSLY
AKVERVQKLAEYIGQQLGFSPEEIRDTRRAAYLSKADLVTNVVYEFPELQGIMGEYYARH
AGENTAVSTAIREHYQPRFAGDMVPQSRVGTAVALADKLDSIVGFFGMNIQPTGSQDPYA
LRRQALGMVHTILHHNLEISLPYLVRKAYQLLQEQVVFPQDEQKTLSDILAFFKQRMDNV
LTEAGIRYDVINAVLAADLDHLSEIRRKAVAISEFRESTEFHQLITGFTRAANLAKNAVK
NDVRPDSFTYEEETCLYQEFLKVKEKADAYIGRKDYQKALGAVADLREPIDHFFTAVMVM
VDDTDIKENRLALLKQIADYVTGIADLSQLVV
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggatctgttatttgaaataggcacggaagagatacctgctcgttttatggcg
tcggctttaaaacagatgaaagaattaggggagagcagcctcaaagaggcccgtctggct
ttttctcacatccatgtgtacgggacgccccggagacttgcccttctggttgagggtctg
gcggaaaaacaggccgatgtgcaggaagaggtgaaaggaccttcagaaaaggcagccttt
gatggggaaggcaacccgaccaaagcggtcctgggttttgcccggggacaaggggtagag
gtaaaagatctggctatcaaagaaaccccggcggggaaatatgtttttgcgacgaagaaa
gcggcaggacaaggggcggaaacggttcttcccggcatccttttaaaccttgtgcacaag
ctctatttccccaaacctatgcgctggggtgatttagagatgcgttttgcccgtcccatc
cggtggatggtggctttattcggcaacgaggtgcttcctgtggaagtggagggactgaaa
gcaggaagagaaagccgcagccatcgttttctcggccagggcatcgtagaattagcctct
cctgatcagtacatccccaaactaaaagaaaactattgtatcgtggaccaaaatgaaaga
aaacagctgatctggcagcagatccaggaaacggccgggaagagcggcggccaggtgctg
ccggatgacgaattattggaggaagtaacctatctgctggaatatcccaccgctttgtgc
ggcggttttgaagaaaagtatcttgccctgcccaaagaagtgttgattacaccgatgcgg
gagcaccaaagatattttccggtgttaaaagaagatggaagcctgctcccgaaatttatc
acggtgcgcaacggtttagcggaacatttggatattgtcacggccggcaatgaaaaggtt
ttgaaggcacggctggcggatgcggagttcttttatacggaagacttgaaaaagaatttg
gcggatcatgtaccgaaactggaaagcattgtcttccacgaaagattgggcagtttgtac
gccaaagtggaacgggtccagaagctggcggaatatatcggccagcaattaggcttctct
ccggaagaaattagggatacccggcgcgcggcatacctgtccaaggccgatctggtcacc
aatgtggtctacgaatttcctgagcttcaggggatcatgggcgaatactatgcccggcac
gccggagagaataccgcggtgagcacggcgatcagagagcattaccagcccaggtttgcg
ggagatatggtaccccagtctagagtgggaacagctgttgcccttgcggataaattggac
agtattgtgggcttcttcggtatgaatattcagcccaccgggtcccaagatccgtatgct
ttaagaagacaggctttgggtatggtgcacaccattctgcaccataacctggagatttcc
ctcccatatctggtgcgaaaagcctaccagctccttcaagagcaggttgttttcccccag
gatgagcaaaaaacattgtcggatatcctggccttttttaaacagcgcatggacaatgtg
ctgacagaggcaggaatacggtatgacgtgattaatgcggtcttggcggcggacctggat
catctttccgaaatccggagaaaagcggtggcgatcagtgaattcagagaaagcaccgag
ttccaccagttgattaccggctttaccagggcggctaatctggcgaaaaacgcggtcaag
aacgatgtgaggccggattcgtttacctacgaggaagaaacctgcctttaccaggaattt
ctcaaggtcaaggaaaaggccgatgcctatatcggcaggaaagattatcagaaggcctta
ggggctgtagcggatctccgggaacctattgatcatttttttaccgctgtgatggtgatg
gttgatgacaccgacattaaagagaaccggctggctttattaaagcagattgccgattac
gtcacgggcatagccgacctttcacagttggtagtttaa
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