Flammeovirga yaeyamensis: KMW28_03320
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Entry
KMW28_03320 CDS
T07356
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
fya
Flammeovirga yaeyamensis
Pathway
fya02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
fya00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KMW28_03320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fya03021
]
KMW28_03320
Transcription machinery [BR:
fya03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KMW28_03320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
HTH_20
HTH_23
HTH_24
GerE
Xre-like-HTH
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QWG02619
LinkDB
All DBs
Position
1:862380..863030
Genome browser
AA seq
216 aa
AA seq
DB search
MNFDQIEEAELIDLVKNGDRHAWEYITKEYYQAILNFINNMVHDWETAEELVQDIFVNFW
TKRENLNINLSLKAYLYRASRNHTLNFIKRRNFERDYQKGVAERMEISKNDTEDAYHFNE
LEKKLYASIEELPEKMREIFKMSRFEDLTYKEIAEALDIPVRTVHYQIGLALKQLREKLK
GHADPSLMSYSGWVAAGLVTQILMDAEIFSEIFVNT
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgatcagattgaagaagcagagttgattgatttagttaaaaacggcgatcga
catgcttgggaatatattacaaaagagtactatcaggcgattcttaatttcatcaataat
atggtgcatgattgggaaactgctgaggaattggtacaagatatttttgtcaatttttgg
acaaagagagaaaatcttaacatcaacttatctttaaaagcttatttatatagagcatct
agaaaccatacattaaactttatcaaaagacgtaatttcgaaagggattatcagaaaggg
gtggcagaacgtatggaaatctcgaaaaatgatactgaagatgcttatcattttaatgag
ttggagaaaaagttatatgcttcaatagaagaacttcctgaaaaaatgagagaaatcttt
aaaatgagtcgttttgaagatcttacttataaagaaattgctgaagcattggatattcct
gtgagaacagtgcattatcaaatcggtttagcgttaaaacaattaagagaaaaattaaaa
ggacatgccgatccaagcttaatgtcttattcaggatgggtagcagcaggattggtgaca
caaattttaatggatgcagaaattttttcagaaatttttgtcaacacttag
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