Gossypium arboreum (tree cotton): 108460540
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Entry
108460540 CDS
T05776
Name
(RefSeq) transcription initiation factor TFIID subunit 12b
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108460540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gab03021
]
108460540
03036 Chromosome and associated proteins [BR:
gab03036
]
108460540
Transcription machinery [BR:
gab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108460540
Coactivators
SAGA/TFTC/STAGA complex
108460540
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
108460540
STAGA complex
108460540
TFTC complex
108460540
SAGA complex
108460540
SLIK complex
108460540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
Motif
Other DBs
NCBI-GeneID:
108460540
NCBI-ProteinID:
XP_017615547
LinkDB
All DBs
Position
12:48344295..48355524
Genome browser
AA seq
623 aa
AA seq
DB search
MAETTSSTSSPKHLQSPNPLLMDPSSSVPTPPPSSAAASNINPTQTATPLTAPSPTATPT
TNPSIDPSLQNLQQQQQQQISQISSPPLSNLAQQQQQQQILQQQTQQGVGGLSNFQVQQN
LQRSPSISRINQLQQQQQQSQQQQQQQSQYGNVLRQQAGLYGQMNFGGSASIQTNQQQNQ
QMGNPNLSRSALIGQSGHLPMLGGAAAAAAAQYNYQSQLLASPRQKAGLVQGSQFHAGNP
TGQSLHGMQAMGMMNLSSHLRANGALYAQQQMNQGQMRQQLSQQTQLTSPQVQSLQRTSS
QAFINPQLSGLAQNGQQGMMQNSLLQQQLLKQIPSISGPGSAPFRLQRQSQVLLQQQLPF
SSPQLQNSMGLNSQQLSQLVQQQSQMGHPQMQQPQQQLQQQLQQQPQQQLQPQQSPLHQQ
QQQSPRIPGPAGQKTLSLTGSQPNATASGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQV
DSQGKLEPEVEDLLLEIADDFIDSVTTFACSLAKHRKSSTLESKDILLHLEKNWRLTIPG
FSSEERNQTRPLSSDLHKKRLDMIRALMESSQPEINANNPKEMIRQGLGNPVGANNLMRP
SPSSEQLVSQAAGSQMLQQITRY
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaactacttcttcaacatcatcccccaagcatctccagtcgccaaatcccttg
ttgatggacccttcatcatcggttccgacaccgccaccgtcatcggcggcggcgtcaaat
attaacccgacgcagacggcgacgccgctaacagccccatctccgacagcgacaccaaca
acaaatccctcaattgatccctcactgcaaaatttgcagcagcagcagcagcagcaaatc
tcgcaaatttcgtctccgcctctttcaaatctcgcccaacaacaacaacaacagcaaatc
ttgcaacaacaaacgcaacaaggtgttgggggtttatcaaattttcaagtgcagcaaaac
cttcaaagatcgccgtcaatttcacgtattaatcaactccaacaacagcaacaacaaagc
cagcagcaacaacagcaacagtctcaatatggcaacgttttaagacaacaagctgggtta
tatgggcaaatgaattttggtgggtcagcttcaattcaaacaaaccaacaacaaaatcaa
cagatgggcaatcctaatttatcaaggtcagctttgattggacaaagtggtcatttgcct
atgctcggtggtgcagctgccgccgccgctgctcagtataattatcagtctcagctttta
gcttcgccgaggcagaaagctggcttggtacaagggtctcagtttcatgcaggaaatcca
accgggcaatctttgcatgggatgcaggcaatggggatgatgaatttgagctcacattta
agggctaatggagctctttatgctcaacagcagatgaatcagggacagatgagacagcag
ttatcgcaacaaacacaactcacatctcctcaggttcaaagcttacaaagaacatcatct
caggcatttataaacccccagttatcagggctggctcagaatggacaacagggtatgatg
cagaactctcttttgcagcaacagttgttgaagcaaataccatcaatatctggtccaggg
tcagctcccttccgccttcagaggcagtcacaagttctcttgcaacagcaactgcctttt
tcttctcctcagttgcaaaattctatgggcttgaattctcaacaattgtcccagcttgta
caacaacaatcacaaatgggccatcctcaaatgcagcagccacagcaacaactacagcag
cagctgcaacaacaacctcaacaacaattacaaccacaacaatcaccattgcatcagcaa
caacagcaatctccgaggattcccggacctgcaggccagaaaactctcagtttaactgga
tcacagcccaatgcaactgcatctggtacaaccacacctgggggaagttcaagccaagga
actgaagcgaccaatcaacttctcggaaaaagaaagatacaagatctagtttcacaggtt
gattcgcaaggaaagctggaaccagaagttgaagatctacttctggagattgctgatgat
ttcatagactctgtgactacatttgcatgcagtttggcgaagcatcggaaatcttcaaca
ttagagtccaaggatatcttgctacatttagagaaaaactggcgtttgactattccagga
ttttcaagcgaagagcggaaccaaacaagaccgttatcgagtgacctccacaagaagcgt
cttgatatgatacgggcactgatggaatcgtcacagcccgaaataaatgcaaataatcct
aaagaaatgataagacaaggacttggcaacccagttggtgcaaacaatttaatgagacct
tcaccgagttccgagcagttggtttcacaagcagctggttcacaaatgctgcagcaaata
acacggtattga
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