Gossypium arboreum (tree cotton): 108460959
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Entry
108460959 CDS
T05776
Name
(RefSeq) probable E3 ubiquitin-protein ligase LOG2
KO
K27504
E3 ubiquitin-protein ligase LOG2 [EC:
2.3.2.27
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108460959
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108460959
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108460959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-P11
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
108460959
NCBI-ProteinID:
XP_017616172
LinkDB
All DBs
Position
12:120528968..120531928
Genome browser
AA seq
363 aa
AA seq
DB search
MGNIGSSGVSGRRRHGSRRNHPPPPHPPPPVQPQPEISANRYVFAAATPYPPQYPNTNPP
QYYQYPGYYPHQPPVPLPLPAPYDHHHHHRGGPHIEPANWSRYACGPMMPPPPPYIEHQK
AVTIKNDVNLKKETLKFEADELNPGKFLVSFTFDATVAGRITVIFFAKEGEDCNLTAMKE
SILPPVIVPFEQGLGQKFRLPSGTGIDFSMFEESELLKVDEVDIYHLAVKAEALPLNQNV
SDGNQESGAMNSQITQAVFEKEKGEYQTRVVKQILWVNGKRYELQEIYGIGNSVDNDVDP
NDSGKECVICLSEPRDTTVLPCRHMCMCSSCAKVLRCQTNRCPICRQPVERLLEIKVNNG
PDE
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggggaacatcggaagtagcggagtaagtggcaggagaaggcacggaagcaggcgaaat
catcctccgccaccacatccacctcctccagttcagcctcaacctgaaatctccgccaac
cgttacgtctttgccgccgcaacgccttacccgccacaatacccgaataccaacccgccc
cagtactaccagtacccagggtactacccccaccagccgcctgtgcctttgccgcttccg
gcgccttacgatcatcatcaccatcatcgaggtggaccccacatagagcccgccaattgg
agtagatatgcttgtggaccgatgatgcctccaccgccgccgtatatagagcatcaaaag
gcggttactataaaaaatgatgtaaatttgaagaaggaaactttgaaattcgaagctgat
gagctgaatcctgggaagttcttggtttctttcacatttgatgctactgttgctggaagg
attaccgttattttctttgcaaaagaaggtgaagactgcaatctgacagcaatgaaggaa
agtattctacccccagtaattgtgcctttcgaacaaggtctaggacagaagtttagactg
ccgtctggaacagggatcgatttctctatgtttgaggagtcggaattactgaaagtagat
gaagtggatatctatcatctggctgtgaaagcagaggcattgcctctcaaccaaaatgtg
tcagatggaaaccaggagtcaggagccatgaattctcagataactcaggcggtgtttgag
aaggagaagggtgaataccagaccagagtagtgaaacagattctgtgggtgaatgggaag
aggtatgagctgcaagaaatatatgggatcggaaattcagttgacaatgatgttgatcca
aatgatagtggaaaagaatgcgttatttgcctttcagaacctcgggacactactgttctt
ccctgcaggcacatgtgcatgtgcagctcttgtgcaaaggttttgagatgccagacaaat
cggtgcccaatctgtaggcaaccggttgagaggcttttggagataaaggtcaacaatggc
cctgatgaatga
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integrated database retrieval system
