Gossypium arboreum (tree cotton): 108476497
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Entry
108476497 CDS
T05776
Name
(RefSeq) RNA-binding protein BRN1-like isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gab03041
]
108476497
Spliceosome [BR:
gab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108476497
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
MARF1_RRM1
GHMP_kinases_C
Motif
Other DBs
NCBI-GeneID:
108476497
NCBI-ProteinID:
XP_017634193
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Position
6:complement(32119897..32125347)
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AA seq
436 aa
AA seq
DB search
MAEGKKEKKATNEESVKLFVGQVPKHMTEAQVLAMFEEFALVDEVNIIKDKATRASRGCC
FVICPSREEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSEDEV
SALFSKYGTLKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVK
WADTEKERQARRAQKAQSQASNMPNADSPHPSLFGALPMGYVPPYNGYGYQAPGSYGLMQ
YRLPPMQNQPAFNNMIPPVNQGSSLRGITPELAPNIAPRNYAVPPTSYVGSAYPAVPGLQ
YPMAYPGGIMNHRLLTGSPGSVPQANINSNSSSSSPVGTNSGGQIEGPPGANLFIYHIPQ
EFGDQELANAFQGFGRVLSAKVFVDKATGVSKCFGFVSYDSPAAAQNAINMMNGCQLGGK
KLKVQLKRDNKQNKPY
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaggaaaaaaggagaagaaagcgacgaacgaagagagcgtgaagctgtttgtt
ggtcaagtgccgaagcacatgacggaagctcaagttctcgcaatgttcgaagagtttgct
ttggtagatgaagtcaacatcatcaaagacaaggctactcgtgcctctagagggtgttgc
tttgttatatgcccgtcaagagaagaggctgataaggcggtcaatgcttgtcataataag
aagacattacctggggcatctagtccattgcaagtgaagtatgcggatggcgagttggaa
agattagagcacaaactctttgttggcatgttgccaaagaatgtctctgaagatgaagtt
tctgctttattttctaaatatggaaccctaaaggacctacagattctaagaggttctcaa
caaacaagtaaaggctgtgcctttttgaagtatgagacaaaagaacaagcccttgctgcc
ctggaggccattaatggaaagcataaaatggagggttcaagtgtccctctcgttgtcaaa
tgggcagatacagaaaaggaaagacaagctcgaagggcccagaaagcccaatcccaagct
tcgaacatgccaaatgctgattcaccacatccttcattgtttggagccttgccaatgggt
tatgttcctccatataatggatatggatatcaggctccaggaagttatggacttatgcag
taccgcttgccaccaatgcagaaccaacctgcgttcaacaatatgattcctcctgtgaat
caaggaagttcgttgcgaggaatcacccctgagcttgctcccaatattgctcctagaaat
tatgctgtgcctcctacaagttatgtgggctcagcttacccagctgtaccaggtcttcag
taccccatggcatatcctgggggaatcatgaaccatcgtctgttgactggttcacctggt
tcagtgccacaagcaaacataaatagtaattcttcatcatcttcccctgtcggtacaaat
tcaggagggcagattgaaggtccacctggtgcaaatctatttatttatcacatacctcaa
gaattcggtgatcaagagttggctaatgcttttcaaggatttggcagggtcttaagcgca
aaggtttttgttgacaaagcaacaggagttagtaaatgcttcggatttgttagttacgac
tctccagcagcggctcaaaatgcaataaacatgatgaatggatgccaattaggtggtaag
aaactcaaggttcagcttaagagagacaacaaacaaaacaaaccttattga
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