Gossypium arboreum (tree cotton): 108479526
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Entry
108479526 CDS
T05776
Name
(RefSeq) alpha-amylase 3, chloroplastic
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00500
Starch and sucrose metabolism
gab01100
Metabolic pathways
gab01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
108479526
Enzymes [BR:
gab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
108479526
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
KATNA1_MIT
Glyco_hydro_70
Motif
Other DBs
NCBI-GeneID:
108479526
NCBI-ProteinID:
XP_017637678
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Position
6:67791537..67799975
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AA seq
892 aa
AA seq
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MAAVTIDSLLQNPTLLFRPKAKVMLKPPRSLDCSRNRKLPLSRGSCFCSFNPRRTIHVVR
ASSSETALIGNFDTSSSDDIFYKDIFPVKRIEKVEGKFFIRLDRSKDQHDWQLTVGCSLP
GKWILHWGVSYLGDSGSEWDQPPKGMRPPGSIPIKDYAIETPLKKLSEGDIFHEVEIDFN
PSSEIAAIHFVLKDEETGAWYQHRGMDFKVPLVDYLEDDGNTVGAKRGFGVWSGALQQFS
NVLLKSEASHADSQNNSIESKDSKNKNRCLEGFYEEQSIVKEVSVGNLVSVAVRKSPETG
KVIVCLETDIPGDVVVHWGVCRDDAKIWEIPAAPYPPETTVFKNKALRTLLQPKATGNRS
GALFTLDEEHFGFLFVLKLDDNTWLKFKENDFYVPLLGTSSVPGQYGQSDITTEEISSKS
YTDGIINEIRNLVSGLSSEKSQKTKTKEVQESILQEIEQLAAEAYSIFRSSITTVPEEVV
SETETTKPAVKISSGTGTGFEILCQGFNWESHKSGRWYMELKEKASEISSLGFTVIWLPP
PTESVSPEGYMPKDLYNLNSRYGTIAELKELVKSLHEVGIKVLGDVVLNHRCAHFKNQNG
VWNIFGGRLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQEFVRKDLKEWLGWLR
EEIGYDGWRLDFVRGFWGGYVKDYLEASEPYFAVGEYWDSLSYTYGEMDHNQDSHRQRIV
DWINATNGTAGAFDVTTKGILHSALERCEYWRLSDKKGKPPGVVGWWPSRAVTFIENHDT
GSTQGHWRFPGGKEMQGYAYILTHPGTPAVFYDHIFSHHRSEIANLISVRNRNGIHCRSL
VKIVKAERDVYAAIIDEKVAMKIGPGYYEPPSGSQGWSLALEGRDYKVWETS
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggttaccatagattctcttctccagaaccctaccctgttatttcgccccaaa
gctaaggtgatgctgaaaccgcctcgctcgttggattgttctcgaaatcgaaagcttccc
ctctctcggggctcttgcttttgtagcttcaatcctcgtcggacgattcatgtcgtcaga
gccagctcctctgaaacagctcttattggcaacttcgacacctcttcttccgatgacatc
ttttacaaagatatttttcccgtcaagcgaattgaaaaggtggagggaaaatttttcatc
aggttggatcgatcaaaggatcagcatgattggcaacttacggtaggatgtagtcttcca
ggaaagtggattcttcattggggagtttcttaccttggagatagtggcagtgaatgggat
caacctcctaaaggcatgagacctcctggttcaattcccattaaagactatgctattgaa
actccgttgaagaaactgtctgaaggagatatttttcatgaagtagagattgattttaat
cccagcagtgaaattgctgctatacattttgtcctgaaggatgaagaaactggagcatgg
tatcagcacagaggtatggattttaaggtgcctcttgtggattaccttgaggatgatggc
aatacagttggagcgaaaagagggtttggcgtatggtcaggtgctctgcagcagttctct
aatgtgctacttaagtcagaagcatcacatgctgatagtcaaaacaacagcatagagtcc
aaggactccaaaaataagaataggtgccttgaagggttctatgaggagcagtccattgta
aaagaagtttctgttggtaacttagtgagtgttgctgttaggaagtcccctgaaacagga
aaagttattgtgtgtttggaaactgatatacctggagatgttgtagttcactggggtgtt
tgcagagatgatgctaaaatatgggaaattcctgctgccccgtacccgccagaaacaact
gtattcaagaacaaggctttacgcactttattgcagccaaaagctacggggaacagatca
ggagcattattcactttagatgaggaacattttggatttctttttgtactcaagctggat
gataatacttggttgaaatttaaagaaaatgacttctatgttcccctcttgggtacaagt
agtgttccaggtcaatatggtcaatctgacattacaactgaagaaatttctagtaaatca
tatactgatggtatcatcaatgagatacgaaacttggttagtggccttagctctgagaag
agtcagaagaccaaaacaaaggaagtacaagaaagcattcttcaagaaatcgaacagcta
gctgctgaagcgtatagcatcttccggagctccattacaactgttccagaggaagttgtt
tcagaaactgagacaacaaagcctgctgttaaaatatcctctggaacaggcacagggttt
gaaatattgtgccaaggtttcaattgggagtctcataaatccggacgatggtatatggaa
ctcaaagaaaaagcttcagaaatatcttcacttgggtttactgtgatttggttaccacca
ccaacagagtctgtgtcacctgaaggatacatgccgaaggacttgtataatctaaactcc
agatatggaactattgctgagctgaaggaacttgtaaaaagcctccatgaagttggtatt
aaagttctcggtgatgttgtattgaatcatcgttgtgcacactttaaaaatcagaatggt
gtatggaatatatttggtggtcgcttaaattgggatgatcgtgcagtggttgcagatgat
cctcattttcagggacggggcaacaaaagtagtggagataacttccatgctgctccaaac
attgatcattcccaagagtttgtgaggaaggatctgaaagaatggcttggctggctgagg
gaagagattggttatgatggatggaggctggattttgtcagaggattttggggtggttac
gtcaaggattacttggaagcaagtgaaccttactttgctgtgggtgaatattgggattct
ctcagttacacttatggtgaaatggaccacaatcaagattcccaccgacagagaattgtt
gactggatcaatgctactaatggaactgctggtgcatttgatgtcacaaccaagggaatt
cttcattcagctctggaaagatgtgagtattggagattatcggataagaaggggaagcct
cctggggttgttggatggtggccatctcgtgctgttacctttatagagaatcatgacact
ggttctacccagggtcattggaggttcccaggtggaaaggaaatgcaaggatatgcttat
atcttgactcacccaggaacgccggctgtgttctacgatcatattttctctcatcatcga
tctgagattgccaatcttatctctgtcagaaacagaaacggaatccattgtcggagttta
gttaaaatcgtcaaggcagagagggatgtgtatgcagccattattgatgaaaaggttgcg
atgaagatcggaccaggttattatgagcctcctagtggttcccaaggatggtccttggcc
cttgaagggagggattacaaggtatgggaaacatcttaa
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