Gossypium arboreum (tree cotton): 108483491
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Entry
108483491 CDS
T05776
Name
(RefSeq) histone deacetylase 19
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03082
ATP-dependent chromatin remodeling
gab03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108483491
03083 Polycomb repressive complex
108483491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gab03036
]
108483491
Enzymes [BR:
gab01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
108483491
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
108483491
HDAC complexes
Sin3A-HDAC complex
108483491
BRAF-HDAC complex
108483491
REST complex
108483491
SHIP complex
108483491
MiDAC complex
108483491
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
108483491
Heterochromatin formation proteins
Other heterochromatin formation proteins
108483491
Chromatin remodeling factors
NuRD complex
108483491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
108483491
NCBI-ProteinID:
XP_017642414
UniProt:
A0A0B0MML6
LinkDB
All DBs
Position
7:complement(38244472..38248763)
Genome browser
AA seq
499 aa
AA seq
DB search
MDTGGNSLPSGPDGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQ
VYKPLPARERDLCRFHADDYVNFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQT
YAGGSVGGAVKLNHNICDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHQRVLY
VDIDIHHGDGVEEAFYTSDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKYYSLNVPLDDGI
DDESYHFLFKPIIGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGTEVDDQLPQHEYYEYFGPDYTLHVAPSNMEN
KNTRQLLEEIRNNLLDNLSKLQHAPSVQFQERPPDTELPEADEDQDDADERCDPDSDMEV
DEKRPIPSRVKREAIEPERKDSEAPKGTAEQARGFDNMATNETLSTKSVDVRPMAIDEPT
VKVEQETSNKASDPIYPKS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggataccggagggaattcattaccgtcgggacccgacggtgtgaagaggaaagtgtcg
tatttttacgatccggaggtcggcaattactattacggccaaggtcatcctatgaaacct
catagaatccgaatgacgcatgcccttttagcacactatggattgcttcaaaatatgcaa
gtttacaagccattacctgctcgagaaagagacctttgccgtttccatgccgatgattat
gtgaattttcttcgcagtataacgccggaaacacagcaagatcagctccggcagcttaag
cggtttaatgtcggtgaggattgtccggtttttgatggccttttctcgttttgtcaaacg
tatgcaggtggatctgttggtggtgctgttaaattaaaccataatatttgtgatattgcg
attaattgggctggtggcttgcatcatgcgaagaaatgtgaagcttctgggttttgttat
gttaatgatattgttcttgctatattggaacttcttaagcagcatcagcgtgttctatat
gttgatatcgatatccaccatggagatggtgtggaggaggcattttatacaagtgacagg
gtcatgactgtttcttttcataaatttggcgattatttccctggcacgggggatatacgt
gatattggatattcaaaagggaaatactattcccttaatgttcctttggatgatgggatc
gatgacgagagttaccatttcttgtttaagccaattattggtaaagttatggaagttttt
aagcctggtgcagttgtccttcaatgtggtgctgactccctatctggagatcggttgggg
tgtttcaatctttcaatcaagggtcatgctgaatgtgttaaatttatgagatctttcaat
gttccattgctactattaggtggtggtggttataccattcggaatgttgctcgttgttgg
tgctatgagacaggagttgcactcggaacggaagttgacgaccagctgcctcaacatgaa
tattatgaatatttcggtccggattatacacttcatgttgcccctagtaacatggaaaac
aagaacacacgccaattacttgaagaaatacgtaataatctacttgacaatctctcaaag
cttcagcatgcaccaagtgtccaatttcaagaaagaccacctgacactgagcttcccgag
gccgatgaagatcaagatgatgcagatgaaagatgtgacccggattcagacatggaggtt
gatgagaagcggccaatccctagcagagtaaagagagaagcaattgaacccgagagaaaa
gattcggaggctccgaaaggcactgcagagcaagctagaggattcgacaacatggcaaca
aatgagaccctaagtacaaagtctgtagatgtcaggcctatggctatcgatgaaccaact
gtgaaagtcgagcaagaaacatcgaacaaagcatctgatccaatatacccgaagtcttaa
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