KEGG   Gossypium arboreum (tree cotton): 108483491
Entry
108483491         CDS       T05776                                 
Name
(RefSeq) histone deacetylase 19
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03082  ATP-dependent chromatin remodeling
gab03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    108483491
   03083 Polycomb repressive complex
    108483491
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gab03036]
    108483491
Enzymes [BR:gab01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     108483491
Chromosome and associated proteins [BR:gab03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     108483491
   HDAC complexes
    Sin3A-HDAC complex
     108483491
    BRAF-HDAC complex
     108483491
    REST complex
     108483491
    SHIP complex
     108483491
    MiDAC complex
     108483491
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     108483491
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    108483491
  Chromatin remodeling factors
   NuRD complex
    108483491
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 108483491
NCBI-ProteinID: XP_017642414
UniProt: A0A0B0MML6
LinkDB
Position
7:complement(38244472..38248763)
AA seq 499 aa
MDTGGNSLPSGPDGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQ
VYKPLPARERDLCRFHADDYVNFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQT
YAGGSVGGAVKLNHNICDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHQRVLY
VDIDIHHGDGVEEAFYTSDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKYYSLNVPLDDGI
DDESYHFLFKPIIGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGTEVDDQLPQHEYYEYFGPDYTLHVAPSNMEN
KNTRQLLEEIRNNLLDNLSKLQHAPSVQFQERPPDTELPEADEDQDDADERCDPDSDMEV
DEKRPIPSRVKREAIEPERKDSEAPKGTAEQARGFDNMATNETLSTKSVDVRPMAIDEPT
VKVEQETSNKASDPIYPKS
NT seq 1500 nt   +upstreamnt  +downstreamnt
atggataccggagggaattcattaccgtcgggacccgacggtgtgaagaggaaagtgtcg
tatttttacgatccggaggtcggcaattactattacggccaaggtcatcctatgaaacct
catagaatccgaatgacgcatgcccttttagcacactatggattgcttcaaaatatgcaa
gtttacaagccattacctgctcgagaaagagacctttgccgtttccatgccgatgattat
gtgaattttcttcgcagtataacgccggaaacacagcaagatcagctccggcagcttaag
cggtttaatgtcggtgaggattgtccggtttttgatggccttttctcgttttgtcaaacg
tatgcaggtggatctgttggtggtgctgttaaattaaaccataatatttgtgatattgcg
attaattgggctggtggcttgcatcatgcgaagaaatgtgaagcttctgggttttgttat
gttaatgatattgttcttgctatattggaacttcttaagcagcatcagcgtgttctatat
gttgatatcgatatccaccatggagatggtgtggaggaggcattttatacaagtgacagg
gtcatgactgtttcttttcataaatttggcgattatttccctggcacgggggatatacgt
gatattggatattcaaaagggaaatactattcccttaatgttcctttggatgatgggatc
gatgacgagagttaccatttcttgtttaagccaattattggtaaagttatggaagttttt
aagcctggtgcagttgtccttcaatgtggtgctgactccctatctggagatcggttgggg
tgtttcaatctttcaatcaagggtcatgctgaatgtgttaaatttatgagatctttcaat
gttccattgctactattaggtggtggtggttataccattcggaatgttgctcgttgttgg
tgctatgagacaggagttgcactcggaacggaagttgacgaccagctgcctcaacatgaa
tattatgaatatttcggtccggattatacacttcatgttgcccctagtaacatggaaaac
aagaacacacgccaattacttgaagaaatacgtaataatctacttgacaatctctcaaag
cttcagcatgcaccaagtgtccaatttcaagaaagaccacctgacactgagcttcccgag
gccgatgaagatcaagatgatgcagatgaaagatgtgacccggattcagacatggaggtt
gatgagaagcggccaatccctagcagagtaaagagagaagcaattgaacccgagagaaaa
gattcggaggctccgaaaggcactgcagagcaagctagaggattcgacaacatggcaaca
aatgagaccctaagtacaaagtctgtagatgtcaggcctatggctatcgatgaaccaact
gtgaaagtcgagcaagaaacatcgaacaaagcatctgatccaatatacccgaagtcttaa

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