Gossypium arboreum (tree cotton): 108489098
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Entry
108489098 CDS
T05776
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108489098
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gab01002
]
108489098
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108489098
Enzymes [BR:
gab01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108489098
Peptidases and inhibitors [BR:
gab01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108489098
Ubiquitin system [BR:
gab04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108489098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
108489098
NCBI-ProteinID:
XP_017648866
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All DBs
Position
9:551085..567943
Genome browser
AA seq
1112 aa
AA seq
DB search
MTLMTPPPLDQEDDEMLVPHNDFVDGPQPLEVAKEAASKVDAQAVDDPPSGRFTWTIENF
SRLNTKKLYSDIFFVGGYKWRILIFPKGNNVDHLSMYLDVADSATLPYGWSRYAQFSLAV
CNQIHNKYTIRKDTQHQFNVRESDWGFTSFMPLGELYDPSRGFLVNDTCVVEADVAVRKV
ADYWSHDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPTGSIPL
ALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEG
TIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVECLEGDNR
YHAEQFGLQDARKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDREDG
KYLSPAADRSVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWFKFDDERVTKEDVKRA
LEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRI
RLKKEQEEKEQKRKEKAEAHLYTVIKVARNEDLVEQIGRDIYFDLVDHEKVRSFRIQKQM
PFNVFKEEVAKEFGIPVQYQRFWLWAKRQNHTYRPNRPLTYQEEAQSVGQLREVSNKANN
AELKLFLEVELGPDLQPVPPPEKAKEDILLFFKLYDPFKEELRYIGRMFVKGAGKPTEIL
ARINKMAGFGPDEEIELYEEIKFEPNVMCEHIDKKLTFRTSQLEDGDIICLQKYSEVASE
QCRYPDVPSFLEYVHNRQVVRFRSLEKPKEDEFSLELSKLHNYDDVVERVAHHLGLDDPS
KIRLTSHNCYSQQPKPQPIKYRGVEHLSDMLIHYNQTSDILYYEVLDIPLPELQGLKTLK
VAFHHATKDEVVIHTIRLPKQSTVGDVLDDLKTKVELSHPGAELRLLEVFYHKIYKIFPL
SEKIENINDQYWTLRAEEIPEEEKELGPHDRLIHVYHFMKDATQNQQVQNFGEPFFLVIH
ETETLAEVKVRVQKRLQVPDEEFAKWKFAFLSLGRPEYLQDSDVVSTRFQRRDVYGAWDQ
YLGLEHSDNAPKRSYAANQNRHTFEKPVKIYN
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgactctgatgactcctccaccgttagatcaggaggacgatgagatgttggttccccac
aatgacttcgtcgacggtcctcagcctttagaagtggcgaaggaagctgcaagtaaagtt
gatgcacaagcagtggatgatccaccgtcaggaaggttcacatggacaattgagaatttc
tcgaggcttaatactaagaagctctactctgacatcttctttgttggaggctacaaatgg
cggatacttattttccccaagggtaacaatgttgatcatttgtcaatgtatcttgatgtt
gcggattcagcaactttaccttatggatggagtagatatgcacagttcagcttagctgtc
tgcaaccaaatacataataagtatactattagaaaagacactcagcatcagttcaatgta
cgtgaaagtgattggggctttacttcattcatgcctcttggtgaactatatgaccctagt
agaggctttcttgtgaatgacacatgtgttgtagaagctgatgttgctgtgcgtaaggtt
gctgattattggtcacatgactcaaaaaaggagactggttatgtcggactcaagaatcag
ggagccacctgctatatgaactctctcctccaaacactctatcatattccctacttcaga
aaggctgtgtatcatatgccaacaactgagaatgacatgcccacagggagcattccattg
gctttgcagagtctattttataagctccagtatagtgacactagtgtggcaaccaaggaa
ttgacgaaatcttttggatgggacacttatgattctttcatgcagcacgatgttcaggaa
cttaatagggttctttgtgaaaagcttgaagacaaaatgaagggaacagttgtggagggt
acaatacaacagttgtttgaagggcatcatatgaattatattgaatgcatcaatgtggac
tataagtcaacgagaaaggaatcgttttatgatcttcagcttgatgtgaaaggctgtaag
gatgtttatgcatcgtttgacaaatatgttgaagtggagtgtcttgaaggtgacaatagg
tatcatgctgaacaatttggtttacaggatgccaggaaaggagttcttttcattgacttt
cctcctgtccttcaacttcagctaaaacgttttgagtatgatttcatgcgagatactatg
gtgaagataaatgatcgctatgaattccccttgcaacttgatctagatagggaggatggc
aagtatttatcacctgcggctgacagaagtgttcgcaacctttatacacttcacagtgtt
ttggttcacagtggtggggtgcatggtgggcattactatgcttatatcaggccaaccctc
tcagatcagtggttcaagtttgatgatgaacgggtaacaaaagaagatgtcaagagggca
ttggaggagcagtatggtggtgaagaggagttaccgcagacaaatcctgggttcaacaac
actccatttaaatttactaaatattcaaatgcatatatgcttgtgtatatacgagaaagt
gacaaggataaaataatctgtaatgtggatgagaaggacattgctgaacacctgagaata
agattgaagaaagagcaagaagagaaggagcaaaagaggaaggaaaaagcagaggcacat
ctgtatactgttataaaggttgcacgtaatgaagacctagttgagcagattggaagggat
atatactttgatctggtggatcatgaaaaagttcgtagctttcgaattcagaagcagatg
ccttttaatgttttcaaggaagaagttgctaaagagtttggtattcctgtgcaatatcaa
cgtttttggttatgggcaaagcggcagaaccatacataccgtccaaatcgaccattaact
tatcaggaggaagcacaatctgtaggacaacttagagaggtttcaaataaggcaaataat
gcagagctgaagttgtttctggaagtggagcttggaccggatttgcagccagtacctcca
cctgagaaggctaaagaagatattcttcttttctttaaactctatgacccattcaaagaa
gagctccgttatattgggaggatgtttgtgaagggtgctggcaagccaacggaaattttg
gcaaggatcaacaaaatggcaggctttggtcctgatgaagagattgaactttatgaggaa
ataaaatttgaacccaatgtcatgtgtgaacacattgacaagaagctcacattccgtacc
agtcagcttgaagatggtgatattatatgccttcaaaaatattctgaagttgcaagtgaa
caatgccgttatcctgatgttccttcatttctggagtatgtgcataatcgtcaggttgta
cggtttagatctctagaaaagccaaaggaggatgaattttctcttgagttgtcaaagctt
cacaattatgatgatgttgttgaaagggtggctcaccatcttggcttggatgatccttcc
aaaattaggcttacatcccataactgttattcccagcaacctaaacctcaacctatcaag
tacagaggagttgaacatttgtctgacatgcttattcactacaatcagacatctgatatt
ctatattatgaagtgttggatatacctttgccagaactccaaggcctcaaaacattgaaa
gttgctttccatcatgctaccaaagacgaagtagttattcatactattagattgccaaaa
cagagcactgtaggggatgttcttgatgacctcaagacaaaggtggagttgtctcatcct
ggtgctgaacttagattacttgaggttttttatcacaagatttacaagatcttccctctc
agtgaaaagatagagaacataaatgatcaatattggacattacgtgcagaggagataccg
gaagaggagaaagagcttggtccccatgatcgcttgattcatgtttaccatttcatgaaa
gatgcaacacaaaaccagcaggtacagaattttggggagccatttttccttgttattcat
gaaactgaaacattagctgaagttaaagtgcgagttcagaaaagattacaggttccagat
gaggaatttgcaaagtggaagtttgcatttttatcactgggtcgtccagagtatcttcag
gactctgatgttgtgtctactcgttttcagagaagggatgtatatggtgcttgggatcag
tatcttggactggaacattctgacaatgcccctaagcggtcatatgcagcaaatcagaac
cggcatacatttgagaagccagtaaaaatctacaactag
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integrated database retrieval system