Gymnodraco acuticeps: 117536853
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Entry
117536853 CDS
T09661
Name
(RefSeq) collagen alpha-1(XIX) chain
KO
K24340
collagen type XIX alpha
Organism
gacu
Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gacu00536
]
117536853
Glycosaminoglycan binding proteins [BR:
gacu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117536853
BRITE hierarchy
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
117536853
NCBI-ProteinID:
XP_034057826
UniProt:
A0A6P8T312
LinkDB
All DBs
Position
Unknown
AA seq
1068 aa
AA seq
DB search
MGCLLRWTALIWTVNVIPCTFGMAVSERTDGSCPPLSVEEHRFTDVLDRPLDITGFDLTE
KFLLRKGTITEDLPSYRLGSSPLIKPTKEIFPNGLSSEYSLVSIFRVRRTTKKDRWYLWQ
IFDQSGDSQVSVVVDGGKKAVEFFSRGELKNALRYTFKSRDLHALFDRQWHKLGVSVQSN
IVSIYLDCKLIERRLTDEKDSVDFRGRTLITTRVEDGRPIDIELRQILIYCDPYMAEMEN
CCELQEPKSEANQTFNGTDPPPVAAKLPQMLSLPAAKSIDRCHCPAEKADTGEAGLSGDP
GHEGELGSEGQKGIDGEKALKGDPGPVGPKGDKADKDCFKGDQGLPGDKGEQGVAGVPGE
PGKEGKRGRRGKSGEPGVRGLPVEGAESAVPGGKGEKGDPGQIDAQGAGEMKGQKGEVGL
PGPPGPVMTAHGLRLLSATDEMKKVKTQGEKGDQGERGAQGPQGFKGNVGPPGLKGDQGP
EGKQGLSGLPGLPGEAGSSGESGVSGKDGLKGEKGDSGAVTGLPGPKGEPGGGYMGDGLS
LSRGSRGPKGERGVPGLSGEHGDKGEPGETIIGSPGRMGSSGKPGIEGLRGLQGLSSPPG
VPGREGSPGRPGPPGPAGPPGEPTALPIVGDMGALLKNACSVCQTRVPGLPGQKGEKGSN
GAHGVEGLVGEKGDPGVRGPMGNPGKEGPKGVKGERGFAGPTGDKGDEGLSGAPGLPGVT
GRTGSQGLMGRPGPLGPHGGKGERGNDGAQGMPGLPGPPGVPYVEGNGMSSLYKLQSGGA
MLGPPGAPGALGPKGDDGVAGEPGAMGLPGLEGLPGAKGDIGLPGSSGMIGPTGKPGTDG
ERGIPGDSGERGPLGETGFPGPEGPQGVPGRPGKDGTHGEKGVTGTSGDRGSKGERGDPG
IPGERGVQGERGRLGDPGPLGPSGQKGDSGAPGTFENANLLGDPGFIQELKMLIRNEVLK
VFEEKLSSSAVPQKTHAGILASQIHGPPGAPGKDGLPGTPGEPGPPGTHGYRGQKGERGQ
LGLGLPGDPGATGPPGPPVTTPQGPPGSPGPRGPPGNCDPGDCLLPSL
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgggttgcttgttaagatggactgctttgatttggactgtaaatgtaattccttgcact
tttggaatggcagtgagtgaacgaacagatggctcatgcccccctctgagcgtagaggag
cacaggttcactgatgtcttagatcgtcctctggacatcacaggatttgatctcacggaa
aagtttcttctccgaaagggaacgatcacagaggaccttccgtcatatcgtttaggaagc
agtcctctcataaagccaacaaaagaaatatttccaaatgggctttcaagtgaatactcc
cttgtctccatcttccgtgtaagaagaaccacaaaaaaagatcgctggtatctatggcag
atattcgaccaatcaggagacagtcaggtatctgtggtggtcgatggtggcaagaaggcg
gtggagtttttttcccggggcgagctaaagaacgctctccgctacacgtttaagagccgt
gacctacatgccctttttgatcgccagtggcacaagctgggcgtttctgtccagagcaac
atagtctccatttatttggactgcaagctaatagaaaggaggctgacggatgagaaagac
agtgttgacttccgtgggcgcactctcatcaccacccgagtggaggatggacgacctata
gacattgaactgagacaaattctcatctactgtgacccttatatggccgagatggaaaat
tgctgtgagctacaggagccaaagagtgaagccaaccagacctttaatgggacggaccct
cccccggttgcagccaagctcccccagatgctgtctctgcccgccgcaaagtcaattgac
agatgtcactgtccagctgaaaaggcggacacaggggaggccgggctttcaggagatcca
ggacatgagggggaacttggatcagaagggcaaaagggaatcgatggggagaaggctctg
aaaggtgacccagggccggttggtccaaaaggagacaaagctgacaaagactgtttcaaa
ggagatcagggcctcccaggtgacaaaggagaacagggtgtggcgggggtcccaggggag
ccaggaaaagagggcaaaaggggacggagaggaaagagtggggaacctggagtcagaggc
ctgcctgtggagggggctgagtctgcagtcccgggggggaaaggggagaaaggagaccct
ggtcagatagatgctcagggggccggagagatgaaaggacaaaagggtgaagttggcctt
cctggtccgcctggtcctgtgatgacagctcacggattaagactgctctctgcaactgat
gaaatgaagaaggtgaagacccaaggagaaaagggagatcagggggagagaggagctcaa
gggccgcaaggcttcaagggaaacgtcggtccaccgggactaaaaggagatcaggggcca
gagggcaagcaaggcctgtctggactcccaggactcccgggcgaggcaggctcgtcaggg
gagtccggggtgtctggtaaagatggcctgaaaggagaaaagggggactctggtgcagtg
acggggcttccaggccctaagggggagcctggaggaggatatatgggcgatgggttgtct
ctaagcagagggtctcgcgggcccaagggtgagagaggtgtcccaggattgtccggagaa
catggagacaaaggcgaacctggagagactatcataggctcacctggccgcatgggatct
tctggaaaaccgggaattgagggccttcgtggactccaaggtttatctagccctcctgga
gttccaggtagagagggctcccctggtaggccaggcccccccggccctgctggaccccca
ggtgaaccaactgccctgccaattgttggagacatgggagcattactcaagaatgcctgc
agtgtgtgccagacgagagtcccagggcttcctgggcagaagggagagaaggggtccaat
ggagcgcatggagtagaaggcttggtgggagaaaagggggatcctggtgtaagaggtccc
atgggtaaccctgggaaagaaggcccaaagggagtgaaaggagagagagggttcgcaggc
cccaccggagataaaggtgatgaggggctttcaggagctccaggacttcctggagtgacc
ggtcgaacagggtctcaggggcttatgggtagacctgggccattggggccacacggtgga
aaaggggaaagaggaaatgacggagcccagggcatgccagggcttccagggccaccgggt
gtaccttatgtggagggcaatgggatgagcagtctgtacaagctgcagagcggtggagct
atgctgggaccccctggagctcctggtgctctgggtcctaaaggagatgacggagttgca
ggggaaccaggggccatgggattaccggggcttgaagggctacccggtgccaagggcgat
attggtttgcctggttcgtctggaatgataggtcctacagggaagcccggcactgatgga
gagcgagggatcccaggagactcgggtgagagggggccgctcggagagacaggattccca
gggcccgagggaccccaaggtgttcctgggagacctggaaaagatggaactcatggagaa
aagggagttacaggtacatcaggagacaggggatccaaaggagagcgtggggatcccggt
attcctggagaaagaggggttcaaggcgagagggggcgcttaggagatcctggcccgctt
ggaccatccggacagaaaggagattctggcgctccagggacatttgagaatgctaacctc
ttgggtgatcccggcttcattcaagaactcaaaatgctcatcagaaacgaagtattaaag
gtctttgaagagaagctatcgagctctgccgtgccacagaagacacatgcagggatcctg
gcttcacaaatccacgggcctcctggagctcctgggaaggacggattacccggaacacca
ggagagcccggacctcctggtactcatgggtacagggggcagaaaggagagcggggtcag
cttggtctggggttaccaggagatccaggagccacggggccaccaggcccccctgtgacc
actcctcagggccctcctggctctccggggccccgtggaccccctgggaactgtgaccca
ggtgactgcctacttccatccctgtga
DBGET
integrated database retrieval system