Gymnodraco acuticeps: 117552808
Help
Entry
117552808 CDS
T09661
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XXII) chain-like
KO
K16630
collagen type XXII alpha
Organism
gacu
Gymnodraco acuticeps
Motif
Pfam:
Collagen
VWA
VWA_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
117552808
NCBI-ProteinID:
XP_034082344
UniProt:
A0A6P8UWS5
LinkDB
All DBs
Position
Unknown
AA seq
1594 aa
AA seq
DB search
MELRLGCRITLVLVILALTLSGEMVEAQRAGCKNVHYDLAFILDTSSSVGRENFEKIRQW
VSNIVDSFDVAPDKTRVAVVRYSDTPTTEFTLNKHRSLEDVKRAASEIVYRGGNTMTGDA
ISYTTNNIFTERNGARPKARGIQRVAILLTDGLSQDYVLEPSKAAAAAGIRMFAVGIGEA
LKVELEEIAAEPKNAHVFYVTDFNAIDKIRGRLRRRLCENVLCPNMKVQPDRFKPNSSSY
GLEEVPGFDLMKFFNVRDILGTRIDEGQSAYVRLGTMPIVQQTEDVFPQGLPDEYAFVTT
FKFRKTSRREDWYLWQVFDKYGIPQVSIRLDGENKAVEYNAVGLIKDAVRAVFKNPEVDK
LFDRNWHKIAMSVEAKSVSLYLDCKLIQTLPIGDREDIDIQGKTVIGKRLYDSVPIDFDL
QRMMIYCDSKHAELETCCDIPDGPCPKKVVTEAPPLEIPTPTPTAVEQKRGPEANCSCPE
GEKGDIGVPGVAGPKGDKGVSGPKGAVGTSGVKGAKGETGKVNSVKGDRGEKGDSGRIGL
TGAPGHKGEKGLGGVPGIDGLSGDKGTAGLAGDAGPEGPAGTKGIQGDEGTPGSSGPKGV
SGESGSRGDKEVQGNKGEAGFDGFPGKPGVPGKDGVKGLSGASGLSGVKGVKGERGLPGL
PGDVVQREGLRGDKGDAGPPGPQGPEGPQGPQGSPGITGQTGTPGEFGLRGKKGESGLPG
VDGLPGISGIHGPAGTAGSKGQTGPPGLPGEIGFSGKHGEPGKSGLSGKDGLDGLPGNDG
ATGPRGERGADGFAGEAGSKGEDGPPGPRGPPGERGVSGSPGLSGVAGGRGDRGVPGERG
VAGTFRTKRRQRRQGDAWREERRGIKGPGPMGQGGLPGEQGFKGPAGLAGPQGETGLTGE
TGRVGDPGPPGIAGPSGLRGLPGNVGIPGIIGPPGPSGQRGDKGEAGKPGQAGPAGRGGD
PGLTGLTGPPGKGKEGQNGDPGPQGIQGPPGPKGQTGSRGEPGSPGDRGSEGGKSNPPPP
PGKDGQPGPAGLRGLTGVAGQMGPAGHNGLPGRPGDKGSQGEPGKAADLSDLDLKDVCSD
CPAGPAGAPGLPGVPGEKGHIGPPGKDGQDGYQGSPGTAGLQGPPGADGAKAIKGDRGPP
GALETKGDNGSPGPPGHPGAAGIMGTAVKVNDGQPGPLGPPGPTGRKGQRGLKGIQGPPG
LLGLIGQDGIMGKDGQPGETGECGTQGEPGPQGNQGLRGLPGFKGHRGEPGPAGTKGEDG
KSGSAGHDGKPGKEGSMGTPGREGLIGPRGEQGKPGEPGPSGKSGLPGTPGTRGDKGEPG
NPGLPGFSGPKGPSGPSGPVGPEGKQGMPGRVGDHGTKGEKGDGGTKGDKGHSGESGMPG
NPGSPGRKGHTGMMGMSGPPGELGAPGSQGPSGNPGIPGQRGESVSLEQMRRLIQEELSK
QLDAKMAYLMAQLQPAHVKSTAGRPGPPGPLGKEGSSGRPGPPGESGMPGQNGGEGSRGP
LGPRGEKGGRGEKGEAGVGDRGEQGPVGPIGPAGLPGYGKDGSPGQAGTQGEPGNPGPHG
QTGPSGPTGQCDPTQCAYYASLAQRPHTKNVKGT
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atggaattacgactgggatgtaggatcaccctggtcttggtcatcctcgccttgactctt
tccggagagatggtggaagcacagagggcaggatgtaagaatgtccactatgacttagcg
ttcatccttgatacctcgtccagtgttggaagagagaactttgagaagatccgacaatgg
gtgtccaacattgtggactctttcgatgtggcaccagacaagaccagagtagccgtggtt
cgctacagcgacacgcccaccactgagttcactttgaacaaacacaggtccctggaggat
gtgaagcgagctgccagtgaaatagtttaccgggggggaaatacaatgaccggggacgct
atcagctacaccaccaacaacatcttcacggagcgaaacggagccagacccaaagccaga
ggcatccagagagtggccatccttctcacagatggtctgagccaggattacgttttggag
ccctccaaagccgctgccgctgccggcatcaggatgttcgccgtggggatcggagaggcg
ttgaaggtggagctggaggagatcgcggccgagccaaagaacgcccacgtcttctatgtg
acggacttcaatgccatcgacaagatcagaggcaggctgaggaggaggctgtgtgagaat
gtcctgtgtccaaacatgaaggttcaacctgatcggttcaagcccaacagctccagttat
ggtcttgaagaggttccagggttcgacctgatgaagttctttaacgtgagagacatcctg
gggaccagaatcgatgaaggccagagtgcttacgttcgcctcggcaccatgcccattgta
cagcaaacagaggatgtgtttcctcagggtttgccagatgaatacgcctttgtgaccacg
ttcaaattcaggaagacctcaagacgggaagactggtacctctggcaggtcttcgacaaa
tatggaatcccacaggtgtccattcgtctggacggagagaacaaagcggtggaatataac
gccgtcggcctgatcaaagacgcggtccgagccgtgttcaagaaccctgaagtcgacaag
ctgttcgaccgcaactggcacaagatcgccatgagcgtggaggccaagtccgtgtctctg
tatctggactgcaaactgatccagactctgcccatcggggaccgcgaggacatcgacatc
caggggaagactgtgatcgggaagaggctatacgacagcgtgcccatcgattttgacctc
cagaggatgatgatctactgtgactccaagcatgcagagctggaaacctgctgtgatatt
cccgatggaccttgccctaagaaagtggttacagaagccccccccctggagatccccacc
cccacaccgactgcagtggagcagaaaagaggacctgaagcgaactgctcgtgcccagag
ggagaaaagggagatatcggtgtgcccggtgtggcaggacctaagggtgataagggtgtc
tctggccctaagggcgccgtcggaacgtctggagtcaaaggagcaaaaggagaaactggc
aaagtaaactctgttaaaggtgacagaggagagaagggtgattcaggcaggatagggttg
acaggtgctcctggacataaaggagagaaggggctcggtggtgtgccaggtatcgacgga
ttatctggagacaagggcacagcaggactggctggtgatgcagggcctgaaggtccagct
ggaacaaagggaattcaaggagatgaaggaactcctggctcatcgggaccaaagggtgtc
tctggtgaatccggttcaaggggtgacaaagaagtacaaggaaacaagggcgaggcaggt
ttcgatggattccccggcaaacctggtgttcctgggaaagatggtgtgaaaggactgtct
ggtgcttctgggctctctggagttaaaggcgtcaagggggagagaggccttcccggatta
cctggggatgtggttcagagagaaggcttacggggtgacaagggagatgctggtcctcct
ggtcctcaagggcccgagggtccccaggggcctcagggttctcccgggataacggggcaa
accgggacccccggagagttcggtctgaggggcaagaaaggtgaaagtggattgcctgga
gtggacgggcttcctggaatctctggtattcatggtccagctgggacagcaggaagcaaa
gggcagactggacctcctggtctacctggtgaaataggattttcaggcaaacacggggag
ccagggaagtctggtctttctggtaaagacggactggacggtcttcctggaaacgacggt
gccacgggtcccaggggagagcgcggagcagatggttttgcaggagaggccggatccaag
ggtgaagacgggcctccggggcccagaggacctccaggggagagaggagtgtctggttcc
cctggtctgtccggtgtggctggagggagaggagacagaggcgtccccggagaaagagga
gtggctggaacctttcggaccaaaaggagacagaggagacaaggggatgcctggagagag
gagagaagggggatcaagggacccggacccatgggtcagggagggcttcctggagaacaa
ggctttaagggaccagctgggttggcgggtcctcagggagagactggactgacgggagag
accggacgagttggagaccctggtccacctggcatagctggtccttcgggtcttcgtgga
ttaccagggaatgtgggcatccccgggatcatcgggcctccgggtccatccggacagaga
ggagacaagggtgaagcaggtaaacccggacaggccggacctgcaggccgaggcggagac
cccggactgaccggactgaccggacccccagggaaagggaaagagggacaaaacggggat
ccaggaccacagggaatccaaggacctccaggaccaaagggacaaaccgggtcacgagga
gaaccggggtcaccgggggacagaggatcagagggagggaaaagtaaccccccccccccc
ccgggaaaagatggacaacctggacctgcgggcttgaggggtctaacaggagtcgccgga
caaatgggtcctgcaggacataatggtttaccaggacggccgggagacaaggggtcacaa
ggagagcctggaaaggcagctgacctctctgacctggatctgaaggatgtttgctcagac
tgccctgcaggcccagctggagcacccggtctcccaggagtccccggagagaaaggacac
atcggacctccagggaaagatggtcaagacggttatcaaggctctccgggaacagctgga
cttcaagggccccctggagctgatggagcaaaggcaataaagggtgaccgaggaccccct
ggggcgctggagaccaaaggagacaatgggtcacccggacctccaggtcacccaggtgct
gctggaataatgggaacagctgttaaggtaaacgatggtcagccgggtcctctcggcccc
ccggggcccactgggagaaaagggcaaaggggtctcaaaggaatccagggaccacccggt
ctcctcggattaatcggtcaggatggaataatgggcaaagatgggcaaccaggagaaact
ggagaatgtggcacgcaaggtgaacctggacctcaaggaaaccaggggctcagggggcta
ccgggctttaagggccacagaggagaacctggacctgcaggaactaagggagaggatggg
aagtctgggtctgctgggcatgatggaaaacctggaaaggagggctctatgggaactcca
ggcagagaaggacttattggaccaagaggagaacagggcaagccaggtgaaccgggtcca
tcggggaaatcaggactccctggaactcctggaacccggggagacaagggagagcccgga
aaccccggattgccaggctttagtggccctaaaggcccctcgggtccatctggtccagtc
ggcccagagggaaaacagggtatgccaggcagagttggtgatcatggtaccaagggagaa
aagggtgacggtggtacgaagggagataaaggacattcaggagagtcaggtatgcccgga
aaccccggatcccccggcaggaagggccacacggggatgatgggcatgtcggggcccccg
ggagaattgggcgctcctgggtcacagggaccttcaggaaacccagggatccccggacag
aggggagagtcggtatcactggagcagatgagacgcctcatccaggaggagctgtccaaa
cagttagatgccaaaatggcctacctaatggctcagttgcagccggcccatgtgaagagt
actgccggccgcccaggaccccctggtcctttaggaaaggaaggatcttctggacgcccg
ggaccccctggagagtctggtatgcccggacagaacggaggagaaggatccaggggaccc
ttgggccctagaggtgagaaaggaggaagaggagaaaagggcgaagctggagtcggcgac
agaggagaacaaggacccgtcggccccataggtccagccggtctgcctggttacggtaaa
gatggaagcccaggacaggcagggacccagggagagccagggaaccccggacctcatggt
caaactggtccttcaggtcctactggccaatgtgacccgacccagtgtgcctactacgcc
agcctggcacaaagaccccacaccaaaaatgtcaaggggacttaa
DBGET
integrated database retrieval system
