Gymnodraco acuticeps: 117555262
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Entry
117555262 CDS
T09661
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117555262 (taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gacu03021
]
117555262 (taf5l)
03036 Chromosome and associated proteins [BR:
gacu03036
]
117555262 (taf5l)
Transcription machinery [BR:
gacu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117555262 (taf5l)
Coactivators
SAGA/TFTC/STAGA complex
117555262 (taf5l)
Chromosome and associated proteins [BR:
gacu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
117555262 (taf5l)
STAGA complex
117555262 (taf5l)
TFTC complex
117555262 (taf5l)
SAGA complex
117555262 (taf5l)
SLIK complex
117555262 (taf5l)
BRITE hierarchy
Motif
Pfam:
WD40
TFIID_NTD2
NBCH_WD40
ANAPC4_WD40
RMC1_N
WD40_like
PROPPIN
Nbas_N
Motif
Other DBs
NCBI-GeneID:
117555262
NCBI-ProteinID:
XP_034086000
EnsemblRapid:
ENSGAUG00000014888
UniProt:
A0A6P8VHX3
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MKRVRTEQIQCAVTQYLKRRQYVETDGSLKGAKLFQSAEEMAASLSVQTESGCANIVSAA
PCQSEPQQYEAQFSRLRSFLSGIKSKNPPNHTSGKYETEISWAKEVSGLLYPLFVYLHLD
LVHCGLKGAVDGFYSRFHTLFLQDSEQRATIEQLRHVLTSQDVAANPKLSAFLEHKYVVH
LTEPAYSYLLRYLQSEDNSAICRALNTHLQVEVTASVRTDYQLYGAASGATAAPNPSSSW
AGVDGVEGGDGVEVPAGIPQSEVALEALQDCIKKVCEGPPTLTTVCFYAFHNTEQMLNTA
EVSADNRLLSAGFDSSTVKLWSLRARKLKAKPHQVDVSHIHLACDVLEEEEEEEDGSGSE
VKTLRGHSGPVFRTAFLTDSSGLLSCSEDTTVRYWDLGSFTNTALYRGHAYPVWDVDLSP
CSLYFASGSQDRTARLWTFSRTYPLRIYAGHLADVDCVKFHPNSSYLATGSTDKTVRLWS
TQQGASVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRVKLWDLASGSLFKDLRGHTDSVT
SLSFSPDSSLVASSSIDNSVRVWDIRNSHGVAPADGSSNEMVGLYTGNTSNVLNVQFMAC
NLLLVSGTAQEKTEQ
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgggttcgcactgagcagatccagtgtgccgtgactcagtacctgaagcggcgg
cagtatgtggaaactgacgggtctctgaaaggagccaagctcttccagtcagcggaggag
atggctgccagcctctcagtgcagacggagtcgggttgtgccaacatcgtctctgcggcg
ccgtgccagtccgagccgcagcagtacgaggctcagttctccaggctgcgctccttcctc
tcaggtatcaaatccaaaaatccaccaaatcacacgtctggaaaatatgaaacagaaata
tcctgggcgaaggaggtgagcggcctcctctacccgctgttcgtctacctccacctggac
ttggtgcactgcggcctgaagggggcagtggatggtttttacagccgtttccacaccctc
ttcctgcaggacagcgagcagcgcgccaccatagagcagctccgtcatgttctcacctct
caggacgtcgcagccaaccccaaactgagcgctttcctggagcacaagtacgtggtgcac
ctgacggagccggcgtacagctacctgctgcgatacctgcagagtgaggacaacagcgcc
atctgcagggcgctgaacacacacctgcaggtggaggtcaccgcgtccgtgcgcacagac
taccagctttatggagctgccagtggggcgactgctgccccaaacccctcctcctcctgg
gcaggagtagacggagtggagggtggggacggggtggaggttcctgcagggatccctcag
agcgaagtggccctcgaggctcttcaggactgcatcaagaaagtctgtgagggcccgccc
acgctcaccaccgtgtgtttctacgccttccacaacacggagcagatgctgaacacagcg
gaggtttctgccgacaaccggctgctctccgccggattcgacagctccaccgtgaagctg
tggagcctgagagccaggaaactgaaagccaaaccgcatcaggtcgacgtgtcgcacatt
cacctggcctgtgacgtactggaggaggaggaggaggaggaggacggctccggcagcgag
gtcaagacgctgcgaggtcacagcggcccggtgtttcgcacggccttcctgacggacagc
tccggcctgctctcctgctccgaggacaccacggtgcgctactgggacctgggcagcttc
accaacacggcgctgtaccgcggacacgcctaccccgtgtgggacgtggacctcagcccc
tgcagcctttacttcgccagcgggtcccaagaccgcaccgcacgcctctggacgttctcc
cgcacgtatccgctgcggatctacgccgggcacctggcggacgtcgactgcgtcaaattc
cacccgaactcaagctacctggccaccggatccacggataaaacggtgcgtctgtggagc
acccagcagggggcgtctgtccgcctgttcaccggacacagaggccccgtgctgtctctc
gccttctcccccaacgggaagtacttagcgtccgccggagaggaccagagggtgaagctg
tgggacttagcttcagggtcgttgtttaaagacctgaggggacacacggacagcgtcacc
agcctgtccttcagccccgacagcagcctggtggcctcgtcctctatagacaactcggtg
cgggtgtgggacatcagaaactctcacggcgtggcgccagccgatgggtcgtctaatgaa
atggtgggactttacacggggaacaccagcaacgtgctgaacgtccagtttatggcctgc
aacctgctgctggtgagcggaacagctcaggagaaaacagaacagtag
DBGET
integrated database retrieval system
