KEGG   Gambusia affinis (western mosquitofish): 122819413
Entry
122819413         CDS       T07758                                 
Symbol
ythdc1
Name
(RefSeq) YTH domain-containing protein 1
  KO
K20100  YTH domain-containing protein 1
Organism
gaf  Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gaf03041]
    122819413 (ythdc1)
Spliceosome [BR:gaf03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    122819413 (ythdc1)
SSDB
Motif
Pfam: YTH
Other DBs
NCBI-GeneID: 122819413
NCBI-ProteinID: XP_043952070
LinkDB
Position
LG17:complement(26018372..26026385)
AA seq 660 aa
MAADRREDKDGELNVLEDLLTEAPDQDDELYNPETEREVSDKKGVKRKSERSDNQDVKRL
RPSSGHAPSRSSGKRALSSKKASSPRRHTAAYHHEYYEERKGRHGAQEGTRSRGVEDGRR
RESQRSVEALSRKLRRDERQVSPSPHGEDNQSEEEAEYSSEPASGSSSPAASHDEEEEEE
EDNQEEEGEEGMEEEEEEEEGEKEDEDEEEDEYDERHGDGNDYDTRSEAGDSRSASSVSF
SDGDSGRSGSASEASGSEKKREKLSSSVRAVRKGIENPTSKLRYILREARFFLIKSNNHE
NVSLAKAKGVWSTLPVNEKKLNAAFQSARSVILVFSVRESGKFQGFARLSSESHHDGSPI
HWVLPAGMNAKMLGGVFKIDWLCRRELPFIKTAHLFNPWNDNKPVKIGRDGQEIQPKVGA
QLCALFPLDESVDVHHVARRVRQKGQTPSELRPRGRPPQREPGRRRPEEYDLHGRKRPRA
DGPPDFNQRPGFIPDLRSQPVDRRFSSVRRDVFLNGSYDYMRDYHHNVGPPAPWQTLAAY
PGVEQQPPHHPPYYHHSHPPPPPHQAFHHHHPSLPPHEAPPPRFRDKQRVPQHRAFASSP
HDYDMRVDDFLRRTQAVVSSRRERERQRERERGGPRRDRERERARDRERERDKERGRYRR
NT seq 1983 nt   +upstreamnt  +downstreamnt
atggcggccgaccggcgcgaggacaaagacggggaactgaacgttctggaggatcttctg
accgaagcgccggatcaggatgacgagctctacaatccggagacggaacgcgaagtcagc
gacaagaaaggagtgaagaggaagagcgagcgatcggacaaccaggacgtgaagaggctc
cgcccctcgtcagggcacgccccctccaggtcctctgggaagcgggcgctgagctccaag
aaggcgtccagcccacgccgccacaccgccgcctaccatcacgagtactacgaggagcga
aaggggaggcacggcgcccaagagggcacacggagccgcggcgtggaggacggccggcgc
cgagagtcgcagcgcagcgtggaggctttgagccggaagctgcgccgcgacgagaggcaa
gtgagcccctcccctcacggtgaagacaaccaatcggaggaggaggcggagtacagctca
gagccggcgtcgggaagctcctcgcccgccgcctcgcacgacgaggaggaggaagaggag
gaagacaatcaggaggaggagggggaggagggtatggaagaggaagaggaggaggaggag
ggagagaaggaggatgaagatgaggaggaggatgaatacgatgagcgtcatggcgacggg
aatgactatgacacgcgcagcgaggctggcgactctcgctccgcctcctctgtcagtttc
tcagacggggattcgggacgctcaggctccgcctctgaagcatcagggtcagagaagaag
cgagagaagctgtcgtcgtcggttcgagcagttcggaaaggaatagagaatcccaccagc
aagctgcgctacatcctgcgggaagcccgcttcttcctcatcaagagcaacaaccacgag
aacgtttctctggccaaggcgaagggcgtctggtccacgctgccggtcaacgagaagaaa
ctgaatgccgccttccagtcggcgcgcagcgtcatcctcgtcttctccgtaagggagagc
ggcaagttccaaggtttcgctcgcctgtcgtcagagtcgcatcatgacggttctccgatc
cactgggtccttcctgctgggatgaacgccaagatgctgggtggagtcttcaagatcgac
tggctctgcaggagggagctgcccttcatcaagacggctcacctgttcaacccctggaac
gacaacaaacccgtgaagatcggacgggacggccaggagatccagccgaaggtgggcgcc
cagctgtgcgccctgttcccattggacgagagcgtggatgtgcaccatgtggcgcggcgc
gtgcgtcagaagggccagacgccgtcagagctgcggccacgcggccgcccgccacagcgt
gagccgggaaggcgtcgacctgaagagtatgaccttcatggcaggaagcgaccgcgagct
gatggcccgcccgacttcaaccagcggccagggttcatcccagacctacggagccagccc
gtggacaggagattctccagtgtcagacgagacgtcttcctgaatgggtcctacgactac
atgagggactaccaccacaacgtggggcccccggctccctggcagactctggcggcgtac
cccggcgtggagcagcagcccccccaccacccgccctactaccaccacagccaccccccg
ccacccccccaccaggccttccaccaccaccacccctccctgccgccacacgaggctccg
ccccctcgcttcagagacaagcagcgcgtgccgcagcaccgcgccttcgcgtccagccca
cacgactacgacatgcgagttgacgactttctgcggcgcacgcaggcagtggtgagcagc
cggcgtgagcgcgagcggcagcgagagcgagagcgcggcgggccgcggcgcgaccgcgag
cgagagcgggcgagggacagggagagagagagggacaaggagagggggcggtaccgcagg
tga

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