Gambusia affinis (western mosquitofish): 122819413
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Entry
122819413 CDS
T07758
Symbol
ythdc1
Name
(RefSeq) YTH domain-containing protein 1
KO
K20100
YTH domain-containing protein 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gaf03041
]
122819413 (ythdc1)
Spliceosome [BR:
gaf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122819413 (ythdc1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
122819413
NCBI-ProteinID:
XP_043952070
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Position
LG17:complement(26018372..26026385)
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AA seq
660 aa
AA seq
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MAADRREDKDGELNVLEDLLTEAPDQDDELYNPETEREVSDKKGVKRKSERSDNQDVKRL
RPSSGHAPSRSSGKRALSSKKASSPRRHTAAYHHEYYEERKGRHGAQEGTRSRGVEDGRR
RESQRSVEALSRKLRRDERQVSPSPHGEDNQSEEEAEYSSEPASGSSSPAASHDEEEEEE
EDNQEEEGEEGMEEEEEEEEGEKEDEDEEEDEYDERHGDGNDYDTRSEAGDSRSASSVSF
SDGDSGRSGSASEASGSEKKREKLSSSVRAVRKGIENPTSKLRYILREARFFLIKSNNHE
NVSLAKAKGVWSTLPVNEKKLNAAFQSARSVILVFSVRESGKFQGFARLSSESHHDGSPI
HWVLPAGMNAKMLGGVFKIDWLCRRELPFIKTAHLFNPWNDNKPVKIGRDGQEIQPKVGA
QLCALFPLDESVDVHHVARRVRQKGQTPSELRPRGRPPQREPGRRRPEEYDLHGRKRPRA
DGPPDFNQRPGFIPDLRSQPVDRRFSSVRRDVFLNGSYDYMRDYHHNVGPPAPWQTLAAY
PGVEQQPPHHPPYYHHSHPPPPPHQAFHHHHPSLPPHEAPPPRFRDKQRVPQHRAFASSP
HDYDMRVDDFLRRTQAVVSSRRERERQRERERGGPRRDRERERARDRERERDKERGRYRR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaccggcgcgaggacaaagacggggaactgaacgttctggaggatcttctg
accgaagcgccggatcaggatgacgagctctacaatccggagacggaacgcgaagtcagc
gacaagaaaggagtgaagaggaagagcgagcgatcggacaaccaggacgtgaagaggctc
cgcccctcgtcagggcacgccccctccaggtcctctgggaagcgggcgctgagctccaag
aaggcgtccagcccacgccgccacaccgccgcctaccatcacgagtactacgaggagcga
aaggggaggcacggcgcccaagagggcacacggagccgcggcgtggaggacggccggcgc
cgagagtcgcagcgcagcgtggaggctttgagccggaagctgcgccgcgacgagaggcaa
gtgagcccctcccctcacggtgaagacaaccaatcggaggaggaggcggagtacagctca
gagccggcgtcgggaagctcctcgcccgccgcctcgcacgacgaggaggaggaagaggag
gaagacaatcaggaggaggagggggaggagggtatggaagaggaagaggaggaggaggag
ggagagaaggaggatgaagatgaggaggaggatgaatacgatgagcgtcatggcgacggg
aatgactatgacacgcgcagcgaggctggcgactctcgctccgcctcctctgtcagtttc
tcagacggggattcgggacgctcaggctccgcctctgaagcatcagggtcagagaagaag
cgagagaagctgtcgtcgtcggttcgagcagttcggaaaggaatagagaatcccaccagc
aagctgcgctacatcctgcgggaagcccgcttcttcctcatcaagagcaacaaccacgag
aacgtttctctggccaaggcgaagggcgtctggtccacgctgccggtcaacgagaagaaa
ctgaatgccgccttccagtcggcgcgcagcgtcatcctcgtcttctccgtaagggagagc
ggcaagttccaaggtttcgctcgcctgtcgtcagagtcgcatcatgacggttctccgatc
cactgggtccttcctgctgggatgaacgccaagatgctgggtggagtcttcaagatcgac
tggctctgcaggagggagctgcccttcatcaagacggctcacctgttcaacccctggaac
gacaacaaacccgtgaagatcggacgggacggccaggagatccagccgaaggtgggcgcc
cagctgtgcgccctgttcccattggacgagagcgtggatgtgcaccatgtggcgcggcgc
gtgcgtcagaagggccagacgccgtcagagctgcggccacgcggccgcccgccacagcgt
gagccgggaaggcgtcgacctgaagagtatgaccttcatggcaggaagcgaccgcgagct
gatggcccgcccgacttcaaccagcggccagggttcatcccagacctacggagccagccc
gtggacaggagattctccagtgtcagacgagacgtcttcctgaatgggtcctacgactac
atgagggactaccaccacaacgtggggcccccggctccctggcagactctggcggcgtac
cccggcgtggagcagcagcccccccaccacccgccctactaccaccacagccaccccccg
ccacccccccaccaggccttccaccaccaccacccctccctgccgccacacgaggctccg
ccccctcgcttcagagacaagcagcgcgtgccgcagcaccgcgccttcgcgtccagccca
cacgactacgacatgcgagttgacgactttctgcggcgcacgcaggcagtggtgagcagc
cggcgtgagcgcgagcggcagcgagagcgagagcgcggcgggccgcggcgcgaccgcgag
cgagagcgggcgagggacagggagagagagagggacaaggagagggggcggtaccgcagg
tga
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