Gambusia affinis (western mosquitofish): 122822136
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Entry
122822136 CDS
T07758
Symbol
tcf20
Name
(RefSeq) transcription factor 20 isoform X1
KO
K24769
transcription factor 20
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122822136 (tcf20)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
122822136 (tcf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
122822136
NCBI-ProteinID:
XP_043956509
LinkDB
All DBs
Position
LG19:complement(5641397..5658251)
Genome browser
AA seq
2408 aa
AA seq
DB search
MQNFSNSPAPPSIPPGFSGRSVGGPPYPPQPVEPQISPRMMEDYVGMQQQSIHRGHHHPS
QASHMLAYGVRNRGALEPPPTQGNVHAGNNNNPYRKEAMEFYFSMGGKDRHRRGGMGYGG
SFGYPGIDGHIPHQYRHPGSSSVTSSGLMSPYPVDYGSSASSGGAAGAFSPSHQYNMNQN
PVMQSVPGSQMQQRQHGQSFPPVHQAQQQRSYPHSGHRMTPQYHYSPQGGASTGSSGMYS
PPLQRYLDGAANSSFDPKVNSSPSVNTSSNSVSNTGTANNVGPVENVQQSYPASNYSGYL
PQSHSLHKQATLQHRNSQHSLGVGFDGSLKMPHQGPSAGGIFAKHHQTSNPSIAQPSSQE
IAKSPMHSNAQQTQMNQNFSPISNPSPAASAVHSPSCSSSPSPLMGVSEALGNASNHGPP
MSSTRSGHGHSRLLQTAPQLSPTPNSNSSVSSCGSSGSHKAHSLSAVGGSSLPPVGRNKM
SQGSREEGSSVYSTSSLDRMQDAGLNSLNALSSQVANLPNTVQHMLLTDTVFSHKKRDGG
QAPHAAHCVPPSQPRSRNLSAASSGSTVKDARAGDGAEEDSTLLPVGVPSGTKVEPEEQL
AEGDRGRARQVSGASTGSEVMSYNPTQTQPGQACNVKILVPESQSKEAAETKTKETNIPS
SAASPSSEGSLTVHSAPPVSSSPSSSSNIPPATTQNCVPETGLAYNDHRGGEIKKESEAT
AEKIQKVSSQMQQDGGVSAKNGQEKKSMLHSESKSQSKKEEEKQALEEQQNISSVGVIVS
SHTDKSKHPQDNCVEERMPLSYSKEATSHNGDEGVDLSLYSSHHQKSNSGRSPNPPQTAS
HKYSYPESTYGSDLSMKNRVRAGTGSVMETNPRLFGYQLSQVGYSHVHPKDGSSSGVEML
VKRGHGAGSKAQDENSQMQQFPSLLQEVLQGYNLDKRYGRPEQTFPARHQAPQQFPSRHP
LDIPEGLSYSAQIVKTTNQKHGSDPDFATDTQSLVKSEVSNAKILQNAEKPDMGVSQSHL
VQTVDSQQPPAKHINLSDYSMPQRKTLSNVQELLLQEPEPLTLTSQTEPQKSGSTLAPSE
RRSVICDVSPNRRSTPEREREGGKQKEREKSQSAASVIQQPFSSPAAPSDLSKKDVIEKQ
VKMEMVHKESGNSQNENNGSQSEAEYHSKPPHLSSGVSADPYRRGTVDITPMPSHPVSMT
ALTSPTRHHSYLHGVDLSSGSSATFPYQYGDSREDNVMSRSNLQFSSHHPFHHLPPQSQS
TSKLQMYPHARGPPHPPHDMSEWVKAINRPPKDMMMMQHGSSPGRHKVNQSEQRQRLIPP
TDIQVEHTSKTQSVHHQNPYYDMKIWESTHPRREGARMMEGDTYYRAQPPPPPLPGPPPL
ASHSHVPTQLTHSHNAVKSEVSRGATEEARHTCPPPPSISSKPPSDTNTAQPQRPTKTGG
SGDTNPLILRRRVRSFISPIPAKRLLQDAPQQRATTNSHHSPGAQSEPSHHNDDDSSTTE
VPCPRLSSPQPGENSFLQPLSPSGGNTKVLAARKGRGLKLEAIVQKITPNIKKPAAPTDD
ESNHYPGFLHSDIPVFNESQDQDLANFPRVAGGEDSYMDESHSLNNMIPFRGVDETGPLP
TSSFPCESHQSSQVKQQDFDFGLGATVASASGDKEDFALLGPLPPPPPLPRPVQGSPPPS
SSALSDIQHFTNTYQQLETRRGEQSAANLLRQKLQESGMGFEDYPGSDYYGTTPPHQGHM
LNRQHQMSSGRSSLSPTDSKPLENVVPKGYFPSGKKKGRPVGSVNKQKRAQTQVPVQAQA
QIQPQSTALSVPPVPTTPPPPTPAPASTPPATQTPSSTSTPTIPTLSENTNTPPTAPSVL
TQVVKADVESEDTQPETEAKQVRCRRRGVKVDGEALEARGRQRRRRRAPVPAAPPISKDE
PDAPLGAMGSFSTNRGCPDPNRKGLFIPHIHVEKKIPEIGAVCTIVNAEDDKMKGERSAA
GGKAGGVGIDSLLTSALSSQLSRRDRELEKRETDEVETTLQSGKALPSSGYVVTGSVITE
TNHSGRLLCCLCQKWANYKHLGDLYGPYYPAEYAAKLPKNQPQIRQCQPATGPNKTGPNL
DTNALSTPQVTPTQFAQFNRPSSENDNFCSNPAERTAFTAPTEEMMMMMYMPGKLSNKTP
LIWEKNPDLRPIPELKREPDLEDDQQQQQAQKQQPQQLTDDTQQRPQHRKLTSHPRFKRR
HKSSEDSPRMVPSNSKASLPFQPPPPALDSLGPLAQLAQLPQMPMDPEELWVHEGCIVWT
SGVYLVNGRLYGLQEALDGARETSCSFCEMVGSTLGCYSKGCTLRYHYLCAIEADCSLNE
DNFSLRCPKHKVKKESLPRASGQPSQCMWSSQREAEGNWEKEEPDLGSYFCMIYLKAQLS
PLRSMSAR
NT seq
7227 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatttctccaacagcccggctccaccctcaatccctcctggattcagcgggagg
agcgtgggcggaccgccatatccccctcagccagtggagccacagatctctccgaggatg
atggaagattacgtcgggatgcagcagcagagcattcacagaggccaccaccacccgagc
caagccagccacatgcttgcgtacggcgtgaggaacagaggagctttggagcctccacca
acacagggtaacgtccacgccggcaacaataacaacccctacaggaaggaggctatggag
ttttatttttcaatgggtggaaaagacagacataggaggggagggatgggctatggggga
agttttgggtatcccggtatcgatggacatatacctcaccagtatcgacatcctggatcc
agttctgttacatcgtctggcctgatgtcgccatacccagtggattatggctctagcgcc
agttcagggggcgctgctggagccttctctccttcccatcagtacaatatgaatcagaac
cctgtgatgcagtcagttccaggctctcaaatgcaacagcgccaacatgggcagagcttt
cctcctgtccaccaggcacagcagcaaagaagctacccacactccgggcacaggatgacc
ccacagtaccattactctccacaggggggagcatccacagggtcatctggaatgtacagc
ccacctctgcagagatatctggatggagctgcaaacagcagctttgatcctaaagtcaac
agttccccaagtgtcaacactagttccaattcagtctccaatacaggcactgctaataat
gtggggcctgtggagaatgttcagcagagctatccagcttcaaattattccggatatctc
ccacagtctcattcacttcacaagcaagccacactacagcacagaaactcgcagcacagt
ttaggggttggttttgacggttctctgaaaatgcctcaccagggtccgtctgcaggcggc
atttttgcaaaacatcatcaaacctccaacccaagtatagctcagccatcctcccaagaa
atagccaaatcccctatgcattctaatgcgcagcaaactcaaatgaaccaaaactttagc
ccgatatcaaacccctcccctgctgcctctgcagttcattcccccagctgtagctcttct
ccttcccctctaatgggggtctctgaggcacttgggaacgcctcaaatcacggccctccc
atgtcgagcacccgtagcggccatggccacagtcggctactgcagaccgcacctcagttg
agtcccacgcccaactcgaatagcagcgtcagtagttgcggcagcagcggcagccacaaa
gctcacagcctgagcgcagttggggggagcagcctacctccagtgggtcgaaataaaatg
agccagggatcccgagaggaaggctcctctgtttattccacttcctctcttgacagaatg
caggatgccggcctgaacagtctcaatgccttgagctcccaagtagccaatttaccgaac
acagttcagcacatgctcctcactgacacggtgttctcgcacaagaagagagacggcggg
caagcgccacacgcggcgcactgcgtgcccccatcgcaacccaggagccggaatttaagt
gcagcctcgagcggcagcacagtcaaagacgccagagctggtgacggggcagaggaagac
tcaactctgctgcctgttggagtgccgtctgggaccaaagtggagccagaggagcagctg
gccgagggggatcgggggagagcaaggcaggtgagtggtgcgagcactgggtctgaagtt
atgagctataatccaacccaaacgcaacctggacaggcatgtaatgttaaaatactcgtc
cccgaatcacagtcaaaagaagcagcagaaactaaaacaaaagaaactaacattccttca
tcagcagcatctccatcctctgaaggtagtctaactgtacattcagcaccaccagtttcc
tcatccccctcctcctcttccaatattcctcctgccacaacacagaattgtgtcccagaa
actggtttggcatataatgaccatagaggtggggaaattaaaaaggaaagtgaagcaaca
gctgagaaaatacagaaggtcagcagccaaatgcaacaagatggaggagtgagtgcaaaa
aatggccaggaaaagaaaagcatgttgcactcagagtccaagtcgcaaagtaaaaaggaa
gaagaaaagcaggccttagaggaacagcaaaacatcagtagcgttggtgtgattgtttca
agtcacactgacaaaagtaagcatccccaagacaactgtgtggaagagagaatgccactc
tcttattcaaaagaagcaaccagtcataatggggacgaaggtgtagatcttagtctgtat
tcgtcccatcatcaaaagtcaaacagtggtaggtctccgaatcctccccagactgcttcg
cataaatacagctacccagaatccacatatggctcagatttgtctatgaaaaacagagtg
agggccggcacaggctctgtaatggaaacaaaccccagattatttgggtaccagctctcg
caggtcggttacagtcatgtgcatccaaaagatgggtccagttccggggtcgagatgcta
gtgaagagaggtcatggggcggggtctaaagctcaggatgagaactcacagatgcagcaa
ttccccagtctcctgcaagaagttcttcagggttacaatttagacaaacgctatggtaga
ccggagcagacgttccctgcacgtcatcaagccccacaacagtttccatctagacatcca
cttgacatccctgagggtttgtcttactcggctcaaattgtaaagaccacaaatcagaaa
catggaagtgatccggattttgccacagatactcagtccttagtaaagtcagaggtctct
aatgctaagattcttcaaaatgctgaaaaacctgacatgggtgtgtcccagagccattta
gtacagactgtagattcccagcagcccccagctaaacacatcaacttatctgactactct
atgccgcagagaaaaacattatctaatgtacaagagctccttttgcaagagccagaaccg
ttaactctcacgtctcaaaccgagccccagaaatcaggatccacattagccccgtcggaa
cggcgatccgtcatctgcgacgtgtcgccgaaccgacgtagcacaccagagcgagaaagg
gagggggggaaacaaaaggaacgggagaaaagtcagagtgcagcctctgtaatccaacaa
ccattttcttctccagctgcaccaagtgatctcagtaaaaaggatgttatagaaaaacaa
gtgaaaatggaaatggtgcacaaagagtctggaaattcacaaaatgagaataatggcagt
caatctgaggcggagtatcattctaaacctcctcatttgtcaagtggggtaagtgctgac
ccctacaggcgtggcactgtcgatataacccccatgccctcacaccctgtgagcatgact
gctttgacctcaccaacaaggcatcactcatatcttcatggagtcgatctttcgtccggc
agcagtgctacatttccgtaccaatatggagactcaagagaagacaacgtgatgtcacgg
agtaatctgcagttttcctctcaccatccttttcaccacttacctcctcagtctcaatcc
accagtaaacttcaaatgtatccgcacgcacgtggccccccacaccctcctcacgacatg
agtgagtgggtaaaagccataaacaggcctccgaaggatatgatgatgatgcagcatgga
tcttctcctgggagacacaaggttaaccagtcagagcagagacagcgattaatcccaccg
actgacatccaagttgaacacacaagcaaaactcagtcagtgcatcatcaaaatccttac
tatgatatgaaaatatgggagtctacacatcctaggagagagggcgctcggatgatggag
ggagacacctactatagagcccaacctcctcctcctcctcttcctggccctcctcctcta
gcttcacacagtcacgttccgacacaactgactcacagccacaatgctgtcaaatccgaa
gtatccagaggagctacagaggaggccagacacacctgtccacctcccccatccatctcc
tctaagcctccttcagacacaaacaccgctcagccacagcgtccaacaaaaaccggaggt
tccggagacacaaatcccctgattttaagaagaagggttcgctctttcatatctcccatt
cctgcaaaaagactgctccaggacgcacctcagcagagagccactacaaactctcatcac
tcccctggagctcagtctgagcccagccatcacaacgacgatgattcatccaccacagag
gtgccatgtccgcggctctcctccccacagccaggtgagaacagcttcctacaaccgctg
tctccttcaggtggtaacaccaaggttttggctgccagaaaaggacggggcttgaaactg
gaggcaatagtgcagaaaattaccccaaatattaaaaagccagcagcacctaccgatgat
gagtcaaatcattaccctggtttcttgcactcagacatcccagtatttaatgagtcacag
gatcaagacttggcaaatttccccagggttgcaggaggggaggatagttacatggatgaa
agtcactcattaaacaacatgattccatttagaggagttgatgaaaccgggcctttaccc
acatcctccttcccatgtgaatcccatcaatcgtctcaagtcaagcagcaagactttgac
tttggtttaggggccaccgtggcatctgcatcaggtgataaggaagactttgctttgctc
ggcccattacctcctcccccacctcttccccgcccggtccagggttctccacctccgtct
tcatccgccctttcggacattcagcattttacaaacacataccagcagcttgagactcga
aggggagagcagtctgctgctaacctccttcgacagaaactccaagaatctggcatggga
tttgaggattaccctggcagcgactactacgggaccaccccgccccaccaaggccacatg
ctgaacagacaacatcagatgtcctctggaaggtccagtctgtcgccgacagactcaaag
ccgttggagaatgttgtgcccaagggctatttcccatctggcaagaagaagggcaggccc
gttggaagcgtgaataagcaaaaacgggctcaaacccaagtcccggtgcaggcccaggct
caaatccaaccacagagcacagctctaagtgttcctccagttccaaccactccaccccct
ccaaccccagcgcctgcctccaccccaccagcaacacaaactcccagcagcacatcaacc
cctaccatacccactctgtcagaaaacacaaacactcccccaacagccccctctgttctg
acccaagtggtgaaagctgacgtcgagagtgaggacacgcagccagaaactgaggcaaaa
caggtgcgatgcagacgcagaggtgtgaaagtcgacggcgaggcactggaggcgaggggg
cggcagaggaggaggagaagagcaccggtacctgcggcgccacccatatctaaagatgag
ccagatgcacctttgggggcaatggggagttttagcacaaacagaggttgcccagatcca
aatagaaaaggcctgtttattcctcacatccacgtggagaaaaaaatacctgagatcgga
gctgtgtgcactattgttaacgccgaggacgacaaaatgaaaggagagcgcagtgcagca
ggaggaaaagcaggaggtgttggaattgattcgctcctgacctcagcgctttcctcccag
ttatctcggagagacagagagttggagaagagggagacggatgaggtggaaaccacactt
cagtcgggcaaagcacttccttcatctggctatgtcgttacagggtctgtgatcacagaa
accaatcactccgggcgcctgctatgctgtctgtgccagaaatgggcaaactacaaacat
cttggagatctctacgggccatactatccggctgaatacgccgcaaagctccccaagaac
cagccccagatcagacagtgtcagcccgctacaggcccaaacaaaaccggaccaaattta
gacacgaacgctttgagtacacctcaggtcacaccaacacagttcgctcagttcaacaga
ccctcatctgagaacgacaatttctgctcaaacccagcagagagaactgccttcacagcc
ccaacagaagagatgatgatgatgatgtatatgcccggaaagctcagcaacaaaacgcct
ttaatctgggagaaaaaccccgatctgcgacctatccctgagcttaaaagagagccggac
ctggaagacgaccagcagcagcaacaggcacagaagcagcagccgcagcagctgacagac
gacactcagcagcgacctcagcacagaaagctgacctcacatccccgctttaaaaggcga
cacaaatccagcgaggactcccctcggatggttccatccaacagtaaggcttccctgcct
tttcagccccctccgcctgccttggactccctggggcccttggcacaactcgcacagctg
ccacagatgcccatggacccagaggagctgtgggtgcatgaaggatgtatagtgtggaca
agtggagtgtacctcgtcaatgggagactgtacggcctgcaggaggcactagatggagcc
agagaaactagctgctcgttctgcgagatggttggctcgacgctgggctgctacagtaaa
ggctgcactctccgctaccactacctgtgtgctattgaagcagactgttctctgaatgaa
gataacttctcgctgaggtgtccgaagcacaaggtaaagaaggagagtttacccagagca
tccggccagccaagccagtgtatgtggagcagtcagagagaggctgagggaaactgggag
aaggaagagccggatttggggagctatttttgcatgatttacttaaaggctcagcttagc
cctctaaggtcgatgtccgctcgctga
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integrated database retrieval system
