KEGG   Gambusia affinis (western mosquitofish): 122827819
Entry
122827819         CDS       T07758                                 
Symbol
sf3a1
Name
(RefSeq) splicing factor 3A subunit 1 isoform X1
  KO
K12825  splicing factor 3A subunit 1
Organism
gaf  Gambusia affinis (western mosquitofish)
Pathway
gaf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122827819 (sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gaf03041]
    122827819 (sf3a1)
Spliceosome [BR:gaf03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    122827819 (sf3a1)
 Complex B
    122827819 (sf3a1)
 Complex C
   U2 SnRNP specific factors
    122827819 (sf3a1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 122827819
NCBI-ProteinID: XP_043966796
LinkDB
Position
LG03:complement(9972184..9978528)
AA seq 784 aa
MPPGPVQIVQPETNNKQNDGPTEETPATKPIVGIIYPPPEVRNIVDKTASFVARNGPEFE
ARIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKAQEPSAAVPKVMQQQAMQQSQQL
PQKVQVIQETVVPKEPPPDFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQ
RNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLIKLKKEAENPKEVMDQVRYRVEWA
KYQERERRKEEEEREKERVAYAQIDWHDFVVVETVDFQPNEQGHFPPPTTPEELGARILI
QERYEKYGESEEVEMEVESEDEEDEREKRADGQPSQPDQDTQVQDMDEGSDDEDEGVKAP
LPPDNPMPPPLPPAPEHVIIRKDYDPKASKPQPSVAAPDEYLISPITGEKVPASKMQEHM
RIGLLDPRWLEQRDRSIRDRQTEDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIG
EEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVGEDETKEKIGPSK
PSEIHQPPPMPSSAPSLPKPSPPVTAVPRPPVSVAPPVRTTLLSAVPVIPRPPVTPVVRL
APGQVITQMPPMIPAPRVNVVPMPPAPHLMAPRPPPMVVPTAFVPAPPMPQPPSAAPAPP
VHPPPPHDDEPMSKKMKTEDNLIPEEEFLRRNKGPVAIKVQVPNMQDKTEWKLNGQVLNF
TVPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMTNGSIIHLALKERG
GRKK
NT seq 2355 nt   +upstreamnt  +downstreamnt
atgccgcctgggcccgttcagatagttcagccggagaccaacaacaagcagaatgatgga
cctacagaagagactccagccactaagcccattgttggcatcatataccctcctccagaa
gtccgaaacattgttgacaagacggccagttttgttgccaggaatggaccagagtttgaa
gccagaatccgtcagaatgagatcaacaaccccaaatttaatttcctcaaccccaacgat
ccctaccatgcttactaccgccacaaggtcaatgaatttaaggagggcaaggcacaagaa
ccatctgcagcagtgcctaaggttatgcagcagcaagccatgcagcagtctcagcagctt
cctcaaaaggtgcaggtgattcaggagaccgtggtccccaaagagccaccccccgacttt
gagttcattgcggacccgccatcgatctctgcgtttgatcttgatgttgtgaagctcact
gcccagtttgtggctcgcaatggccgacagtttctcacccagctgatgcagaaggagcag
aggaactaccagtttgactttctgcgcccacagcacagcctcttcaactatttcaccaaa
ctggtggagcagtacacgaagatcctgatccctcccaaaggcctgctaatcaaacttaaa
aaagaagctgagaacccaaaggaagttatggaccaggtgaggtaccgtgtcgaatgggca
aaataccaggagcgtgagagaaggaaggaggaagaggagagggagaaggagcgggtcgct
tacgcccaaatagactggcatgattttgtggtggtggagacggtggatttccagcccaat
gagcaaggtcacttccctccacccacgacaccagaggagcttggcgctcgcatcctgatc
caggagcgctacgagaaatatggtgaaagcgaggaggtggagatggaggtggagagtgag
gatgaagaggatgaacgagaaaagcgggctgacggccagccttctcagcctgatcaagac
acgcaagtccaggacatggatgagggatctgatgacgaagatgaaggtgtgaaggctcca
ttgccaccagacaacccgatgccaccccccctgcctccagctccagaacatgttattatt
cgcaaggactacgaccccaaagcctccaagccgcagccctcggttgcagctccagacgaa
taccttatttcaccaatcaccggtgagaaagtccccgccagtaagatgcaggagcacatg
cgcatcggcctgctggatccgcgctggcttgaacagagagaccgaagcattagagacagg
cagacggaggatgaagtctacgctcccggtttggatattgagagcagcttgaagcagctc
gctgagaggcgtactgatatctttggtgtggaagagacggccatcggaaagaagatcggc
gaggaggaaattcaaaagccagaagaaaaggtcacctgggacggccactcggggagcatg
gctcgtacgcagcaggcagcacaggccaacatcactctgcaggagcagatcgaagccatt
cacaaggccaaaggactggtgggagaggatgaaacgaaggaaaaaattggtcccagcaag
ccgagtgaaattcatcagcctcctcccatgccctcatcggcaccaagtctgcctaaaccc
agtcctcctgtcacagccgtgccacgcccacctgtctcagtggctcctccagtccgtacc
actctgttgtctgccgtacctgtgattccacggcccccggtgacccccgtggtgcgtttg
gcgccaggtcaagtcatcacacagatgccgcccatgattcctgctcctcgtgtcaacgtg
gttcccatgccaccagcgccccacctgatggcccccaggcctccccctatggttgttcca
actgcgtttgtccccgctcctcccatgccacaaccacccagtgctgccccagcaccgccc
gtccacccaccccctcctcatgacgacgaaccaatgagcaagaaaatgaagacggaggac
aacctcatcccagaggaagagtttcttcgtcgaaacaagggtcctgtggcaatcaaagta
caggttcccaacatgcaggacaagaccgaatggaagctaaatggccaagtgttgaatttc
actgtcccacttacagaccaggtgtctgtcattaaagtcaaaatccatgaggcaacaggc
atgccggctggaaaacagaagttgcagtatgagggcatcttcatcaaggattcgaactct
ctggcttattacaacatgaccaatggttccatcattcatttggctctgaaggagagaggt
ggaagaaagaagtga

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