Gambusia affinis (western mosquitofish): 122830994
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Entry
122830994 CDS
T07758
Symbol
atn1
Name
(RefSeq) atrophin-1 isoform X1
Organism
gaf
Gambusia affinis (western mosquitofish)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
122830994
NCBI-ProteinID:
XP_043972795
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All DBs
Position
LG05:complement(18503208..18518303)
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AA seq
1710 aa
AA seq
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MKTRTHKESMPMRSGRRRGASEERRGRRPHTSPTRPERTDRQTQRGGAEELAGNRFSCRS
QGHDSSESEGEELVSPPKRQKVQDSAPNPNPPTSTHLTESSTTSTVPPPTSAASHSRESD
NEDGQSQGSRSSAVGSLANSSSSLSSGRDIDQDNRSSSPSLSASPLGSLDSDSDGPDSPK
QGEREKGKEVGAGKVTGEDRRTLREGRGEESCGDGEKRDIETIEDSSSLKPPSTPCSSSS
LTPSIRGGDSSNDSNSGRKSYFSLDSKLMCKVEYGSPAGVETNRMTSKASTQCINKTTIS
GGEFSHNSPNIPHSLPPPLPPPPALKPLELGGQNLPAEVKTERDKTEKTEKLMDKAQSTP
PSLLPQCGPQPLSQSQSQTQPSSHPHHYSSSWQGGATTGCQGSWGYSRYPGSHHPQHQPP
VQQQQLPSVYNPPSSRHPSYLPHPHPHPHREYLPRYAGGGGDRERGPTGERERGVRGECG
GREITREFSTPVGNSSNSNGGGSSNNSCGAMSVPNNIPAREFGGMPVGQNREYQGSGRDG
PNLGPDRRDFGSAFRDREREREREGGREFNLPNQNQNRDFGPTGPAGGHPRDKDGNRWSE
FGSQTREVVSNSNPNNNSIPQGNPPSSTSGLPVAPMLNRDPPASPQNNLNHPSHSSLPQH
PHSHPPNSSNRDFPPPMDQTQMPSTGADHFHRDYPPNGGKDFPAGAPPSAGTNREYLSSP
GVTPNLGREYPGTGGTQHAHPPHPHFQPGPKDRERDSNLRESALYQSRGGPNQPPALSPS
SSSSLHGQYPHPPPQPPVHPPQSSHSQAPQSTMGPSTRPPHYQSSAQTPPIPLSPLPSPS
TNQMGAFSSFPSSSSSAPTSQLPVPGVSSSCSPGCRPSSFHGTLNNHPQFSGTYHSNGSN
GSTMANSSSNSSAVSSSSHTNSQAPSPQNVSKAPPPLSNSTNNNSNVSTPALTSSLPGVE
GPSDSGLPPTAVIKEEPPEDREETESPPPVLRSPSPEPKHVDIPIHASQSARFHKVLDRG
SGNSCARSDVLFVPLDGSKLWKKRNEMIERARREVEQRARDLREKERERERERERELDRH
LQHQKDVSAAGGGRQGSSLFFPPSSSIILDPSSSSASSSANVVAHPPVHPQHHPSHPHAH
LPPTHHLHPSLSHAIPHSLLLPTMGGASAVVGGPQGALGIGLGGPYLGPDTPALRTLSEY
ARPHAMSPLGAASRAQAHHPQVHHGHSHVHPSFFLPQLQNHALSHPHHLPTDAATAAAIL
GFLYGGSLEGGPGVPGHPGMAGGPVPGGIGGAGLGGMGFPHAMAAHRDRLKPGFEFKSDE
RVYPAGSIPDPAAIALAHSHAHAHSNAHAHAHSLLLAGGAAANEVSLYGTPPPPAPPGPP
HLQNPTLAQVTRPPQPPAPQSLPNPPPSSLLPPSLPSHPSSAPLAAPSAPAPPSAPSSAP
PQPAPPTSNSSSLHHPVPHSSFPNSLSSHVPPPPAPAAPPETYPTPTRSPASYERDRSGA
RERERERDRAALPAFGDRERERERERERGGSGGGGGAGGGNGGGTGGGGGGENLGRLQML
NVTPHHHQHSHIHSHLHLHQQDTAAGGVHPLMDPLASGSPLARLPYPGAALGTPILAHPL
TDSEVLRQQLFGEEKAPRPCAPFRDLPQPSSLTGPMSAAHQLQAMQQAQSAELQIQRLAL
EQQWIHHHHHHSLTQDEYYSHLKKESDKTL
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaaggacgcacaaagaatcgatgcccatgcgcagtgggcgaaggaggggggca
agtgaggagagaaggggcaggcgcccacacaccagtccaactcgccctgaacgcaccgac
cggcagacgcaaagaggtggtgctgaggaactggctggaaatcgcttcagttgcagatca
caaggacatgattcatcagagagtgagggggaggaacttgtatcacctccaaagagacag
aaagttcaggattcagcaccaaacccaaatcctccaacatcaacacacttgactgaaagc
tcaacaacttccactgttccacctccaacctcagctgcaagccattctcgggagagtgac
aatgaagatggccaatcccagggcagtaggagttcagccgtagggagcctggccaatagc
agtagcagcctgagtagcgggcgggatatagaccaggacaatcgatcttcatctccgagt
ctttccgcttcccctttgggtagcctggactctgattctgatggacccgattcaccaaag
caaggagaacgtgagaaaggtaaagaggttggtgcagggaaggtgaccggggaggatagg
agaacgttacgagaggggagaggagaagaatcgtgtggcgatggagaaaaacgagatata
gagacaattgaagattcttcatctctgaagcccccttctactccctgctcttcctctagt
ctaactccttctattcgaggaggagattcatcaaatgacagcaatagtgggaggaaatcg
tatttctccctggactccaaattgatgtgtaaagttgagtatggctcaccagcgggtgtt
gaaaccaacagaatgacttccaaagccagcacacagtgcataaacaaaacaacgatctct
ggaggagaattttcacataacagccccaacattccccattcgttgccccctccgcttcct
cctccacctgccctgaagcctttggagcttgggggacaaaacctgccggctgaggttaag
acagaaagagacaaaactgaaaaaacagagaaactcatggacaaggctcagtccacgcct
ccttctctgctgccacagtgcggcccacagcccctgtcccagtcccagtctcagacccag
ccctctagccatcctcaccactacagctccagttggcagggcggggcaacaactggttgc
caggggagctggggctactcccgctatcctggcagccaccacccacagcaccagccccct
gtgcagcagcagcaacttccctccgtctacaacccgccatcctctcgtcacccctcttac
cttccccatcctcacccccatcctcacagagagtatcttcccaggtacgctggagggggg
ggggacagagagaggggccccacaggagagagagagcggggagtaagaggagagtgtggt
gggagagagatcacgagagagttttctactccagttggcaacagcagcaacagtaatgga
ggggggagtagtaataatagctgtggtgcaatgagtgtccccaacaacattccagctagg
gaatttggggggatgcccgtagggcagaacagggagtaccaaggctcaggaagagatgga
cccaacttaggtccagatcgaagagactttggttcagcattcagggacagggagcgcgaa
agggagcgggaaggaggaagggagtttaatctgccaaatcaaaatcagaatagagacttt
gggcccacaggacctgcaggggggcacccaagagacaaagatggcaacagatggagtgag
tttgggagccagacaagagaggttgtgagcaacagcaaccctaataacaactccatacca
caggggaaccccccaagttcaaccagtggtctaccagtcgcccccatgctgaaccgtgac
ccacctgcgtcaccccaaaacaacctcaatcacccttctcattcctctcttccccagcat
ccccattctcatcccccaaattcatccaacagggatttccctccacccatggaccagaca
caaatgccttcaacaggagcagatcacttccacagagactatcctccaaatggaggaaaa
gactttccagctggggcacctccttctgctggcacaaatcgagagtacctaagctcccct
ggagtgactccaaacctgggacgagagtacccagggacaggaggaacgcaacatgcccac
ccacctcacccccacttccagcctgggcccaaagacagagagagggattcaaacctgcga
gagtctgctctctaccaaagccgtggaggccctaatcagcctcctgcactctctccttcc
tcctcttccagccttcacggacaatacccacatccgcctcctcagccacctgtacacccc
cctcaaagctcccattcccaggcaccccaatcaactatgggacctagtacacgtcctcca
cactatcagtcctctgctcaaactcctccaatacctctgtctcccttacctagcccatct
accaatcagatgggagccttctcatcctttccctctagttcttcctctgcacccacctca
caacttcccgttccaggtgtgtcatccagctgttcacctggatgccgcccttcgtctttc
catgggactttgaacaatcatcctcagttcagtggcacctatcactccaacggaagcaat
ggcagcaccatggcaaacagcagtagcaacagtagcgcagtcagcagtagcagccacaca
aactcacaggcaccctcacctcagaatgtctcgaaggcaccaccacctctcagtaactcc
accaacaacaacagcaacgtctcaacacctgccttgacctcatcacttcctggtgtggag
ggaccttcagactcaggtctacctccaacagccgtcatcaaggaggaaccaccagaggac
cgggaagaaactgaaagccctcccccagtgttaagaagtccctcacctgaaccaaaacat
gtggatattcctattcacgccagccaatcagcacggtttcacaaggtccttgacagaggc
agtggcaactcttgtgcccgcagcgatgtcctctttgtcccattggatggctccaaactg
tggaaaaagaggaacgagatgattgaaagagctcgcagggaagttgagcagagggccaga
gacctgagagagaaagaaagggaacgggaacgagagcgtgagagagaattggatcggcat
cttcagcaccagaaggatgttagtgctgccggagggggacgccagggttcctcgctcttc
ttccccccctcgtcctccatcattcttgacccttcctcttcctccgcctcttcctccgcc
aacgtagtcgcccaccctcccgttcacccccagcatcacccctcacatccacacgctcat
cttccaccgacacatcatctccacccctctctgtcccacgctattccccactccctcctc
ttacccaccatgggtggggcatcggcagtggttggtgggcctcagggggccctggggatt
gggttaggaggtccatatttaggacctgacacaccagccctgagaaccctgagcgaatac
gctcgcccacatgctatgtctcctcttggtgcagcgagtcgtgctcaggcacaccaccct
caagttcaccatggtcactcccatgtccacccctcattcttcctccctcaattacaaaac
catgctttgagccacccacaccacctacccaccgatgcagcaacagcggcagccatcttg
ggctttttgtacggtggcagccttgaaggtggtccaggtgtgccagggcaccctgggatg
gccggggggcccgtaccaggaggaattggcggtgcaggtttgggaggcatgggtttccct
cacgcaatggcagctcatcgagatcggctaaagcctggatttgagtttaagagtgatgag
cgggtttatcctgcgggatctatacctgaccctgcagctattgcgcttgctcattcgcat
gcgcatgcccacagcaacgcccatgcacatgctcactccctgctgcttgcaggaggggca
gcagctaatgaagtatcactctacggcactcctcctcctccagctccacctggacctcca
caccttcaaaacccaaccctggcacaagtaacccgacctccacaacctcctgctccacag
tcactgcctaatccgcctccttcatccctccttccaccttccctcccctctcacccttca
tctgccccactggccgccccctctgccccggcaccaccttctgcaccttcatccgctcct
cctcaacctgctccacctacctccaactcttcctcacttcatcacccagtgccccactct
tctttccctaactccctgtcctctcatgtgcctccgcctcctgccccagctgctccgccc
gagacttatccgactcccacgcgctcccctgcctcgtacgagcgtgacaggagcggagcg
agggaacgggagagggagcgggacagagcagctttgccggcctttggggacagagagcga
gaaagagagagggagcgagaaaggggaggaagtgggggaggcggaggagcaggagggggg
aatggaggcggaacagggggaggaggtggaggagagaacctggggcgtcttcagatgttg
aatgtgacgcctcatcatcaccagcattcacacatccactcacatcttcacctgcaccag
caagacacagcggcgggcggggttcaccccctgatggacccgttggcgtcggggtctcct
ttggctcgccttccttacccaggagcagcgctcggcacgcccatcctggctcaccccctc
actgacagcgaggtgcttcgccaacagctgttcggtgaggagaaggctcctcgtccatgt
gctcctttccgtgacttgccccagccttcctccctcactggtcccatgtcagcggcccat
cagctccaggccatgcagcaggcccagagcgcggagctgcagatccagagactggccctg
gaacagcagtggatccaccaccatcaccaccactccctcacacaggacgagtattacagt
cacctgaagaaagagagtgacaagaccctgtga
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integrated database retrieval system
