Gambusia affinis (western mosquitofish): 122841515
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Entry
122841515 CDS
T07758
Symbol
ubtfl
Name
(RefSeq) upstream binding transcription factor, like isoform X1
KO
K09273
upstream-binding transcription factor
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122841515 (ubtfl)
03021 Transcription machinery [BR:
gaf03021
]
122841515 (ubtfl)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
122841515 (ubtfl)
Transcription machinery [BR:
gaf03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
122841515 (ubtfl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
DUF4473
Poxvirus_B22R_N
Motif
Other DBs
NCBI-GeneID:
122841515
NCBI-ProteinID:
XP_043990796
LinkDB
All DBs
Position
LG12:28297759..28304611
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AA seq
703 aa
AA seq
DB search
MNGSSSSISAAQRIKAEADAWSQEDCLTLLERIRVLLPDGDAMKYKTTESHFDWDKIGFG
RFTGDMCRQKWQKVSSEVRKYRTMTELIVDAIEFVKNPYKGKKLKTHPDFPKKPLTPYFR
FFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPDKKKQKYITEFQREKEEFEKNMARFRE
EHPDLMEERKKSDLPEKPKTPQQLWYNHEKKAYLKLHPEVSQKELKEALRRQWSQLSDKR
RLKWISKALELQKDYEDSMRAYHEAHPDSNSEEHVRSVLTKAERQLKDKFDGRPTKPPPN
GYSLYCAELMVNMKDVPSTERMVLCSKQWKMLTQKEKDMFQKRCEQKKKQYDVDLQRFLE
SLPDEERDRVLTEEKMGGARLNVGVAPSPLRAKSPSVKERVREAEPEAWPAAGGGATAPR
ERRDTRKATKLPETPKTAEETWQHSVTGDYLAKYRSDRRKAQAAMEAAWRSMEKKEKIPW
IKKAAEDQKRYERELLEMRAPTVGQRKPKFDGEPKKPPVSGYQMFSQELLTNGELNHFSL
KERMVEIGKRWQKLSQAQKDKYKKQVEEQQVEYKAHLESWVKSLSPQDRAVYKEFSSSKR
RSSSSKATTSPVAKVRVTAKGKVSGARAVTPGVTVGKRPMAYRAKQDMSDSEEEEEKSGS
SDSDEDDETSGSSDSEDEDENDDDEEEDDDQSSSEESSELDSD
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcagcagcagcagcatctctgcggctcagaggatcaaggctgaagcagacgcg
tggagccaggaggactgcctgacgctgctggagcggatccgcgttctgctgcccgacgga
gacgccatgaagtacaaaaccaccgagtcgcacttcgactgggacaaaatcggcttcggc
cgcttcaccggggacatgtgccgccagaagtggcagaaggtctcctccgaggtccggaag
taccggaccatgacggagctcatcgtggacgccattgagtttgtcaagaacccgtacaag
ggcaagaagctgaagacccacccagacttccccaagaagccactgactccctacttccgc
ttcttcatggagaaacgggccaaatacgccaagatccatccggagatgagcaacctggac
ctcaccaagatcctgtccaagaagtacaaggagctgccagacaagaagaagcaaaagtac
atcacagagttccagcgggagaaggaggagtttgagaagaacatggcccggttcagggag
gagcatccggacctgatggaggagcggaagaagtcggacctgccggagaaacccaagacg
ccccagcagctgtggtacaaccacgagaagaaggcctacctgaagctgcacccagaggtg
agtcagaaggagctgaaggaggcgctgaggaggcagtggtcccagctgtctgacaagcgc
agactgaagtggatcagcaaggcgctggagctgcagaaggactatgaggacagcatgagg
gcgtaccacgaggcccacccagactccaactcagaggaacacgtccgctctgtcctcacc
aaggctgagagacagctgaaggacaagttcgatggacggcccaccaagccgccgccgaac
ggctactccctgtactgcgccgagctgatggtcaacatgaaggacgtgccgagcaccgag
cgcatggtgctgtgcagcaagcagtggaagatgctgacccagaaggagaaggacatgttc
cagaagcgctgcgagcagaaaaagaagcagtatgacgtggacctgcagcgcttcctggag
agccttcctgacgaggagcgggaccgagtcctgacggaggagaaaatgggcggagccagg
ttgaatgtgggcgtggctcccagccctctcagagccaagtctccatcggtcaaggagcgc
gtccgggaggcggagccagaggcgtggccagcagctggaggtggagccacagcgcccaga
gagcggagggacaccaggaaggcaacgaagcttccagagacgccaaaaaccgccgaggag
acgtggcagcatagcgtgacaggagattacctggccaagtaccggagcgaccgcaggaag
gcgcaggcggcgatggaggcggcttggcgctccatggagaaaaaggagaaaattccctgg
atcaagaaagcagcagaggaccagaaacgttacgagagggagctgttggagatgagagcg
cccactgttggccagaggaagcccaagtttgatggggagccgaagaagcctccagtgagc
ggctaccagatgttctcccaggagctgctgacgaacggagagctgaaccacttcagcctg
aaggagcgcatggtggagatcggcaagcgctggcagaagctcagccaggcgcagaaggac
aagtacaagaagcaggtggaggagcagcaggtggagtacaaggcccacctggagtcctgg
gtcaagtcgctgtccccgcaggaccgcgccgtctacaaggagttctcctcctcgaaacgt
cgcagcagctcctccaaagccaccaccagtcccgtggccaaggtccgggtgacggcgaag
gggaaggtgagcggagccagggccgtgaccccaggggtcaccgtggggaagaggcccatg
gcatatcgcgccaagcaggacatgtctgactccgaggaggaggaggagaaaagtggttcc
tcagactctgatgaagacgatgagacatcaggaagttcagacagcgaggatgaagatgag
aacgatgacgatgaagaggaggatgacgaccaatcttcctcagaggaatccagtgagttg
gactcagattag
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integrated database retrieval system
