Geoglobus ahangari: GAH_01512
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Entry
GAH_01512 CDS
T03939
Name
(GenBank) DNA ligase D, ligase domain
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
gah
Geoglobus ahangari
Pathway
gah03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
GAH_01512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gah03400
]
GAH_01512
Enzymes [BR:
gah01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
GAH_01512
DNA repair and recombination proteins [BR:
gah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
GAH_01512
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
AKG91197
UniProt:
A0A0F7IE38
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All DBs
Position
complement(1297789..1298772)
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AA seq
327 aa
AA seq
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MSWFDEKIRPMLAKRAEPFDSPDFIYELKLDGTRCIAFVDVERRRVRMQNRRLFEIAYRY
PEIDLLSAFDDSVVVDGEIVVLKNGVPDFSLLQKREHVDSESRVRILSKLYPAVYFVFDV
LYSSGRWTMKRPLSERKEILGEVLSETEHVLKVESFREKGVELFSKAVSMGFEGLVAKRI
DSPYRPGVRSDEWLKIKKRRTMDCVITGYLEGEGQREGLFGSLVLAVYDGETLIHVGQVG
TGFSSDFLREFTGKLREIEIQTPHFSESFARPVHWVKPVYVCEVEYLELTKDCKLRAPVF
RRLRYDKSPEDCTAEQIEECIKNRVVD
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagctggttcgacgagaagataaggccaatgctcgcgaagagggccgagccgtttgac
tctccagacttcatatacgagctcaagctcgatggcacgaggtgcatcgccttcgtggac
gtggagaggcgaagggtcaggatgcagaaccgaaggctgttcgagatagcctacaggtac
cccgaaatcgaccttctgagtgcgtttgacgacagcgtagttgttgacggggagatagtc
gtcctgaaaaacggagttccggacttctccctcctgcagaagagggagcatgtggactct
gaaagcagggtaaggattctctcgaagctgtatccagcagtttacttcgtcttcgacgtc
ctttactcctcgggaaggtggacgatgaagcgtccgctctctgagagaaaggagattctc
ggagaagtgctctccgagaccgaacacgttctcaaggttgagtcgttcagggagaagggg
gtggagctgttcagcaaagcggtttcaatgggcttcgaggggcttgtagcaaagaggatc
gactcaccctacaggccgggagtcaggagtgacgagtggctcaagatcaagaagaggaga
accatggactgcgtcataaccggctacctcgagggggaagggcagagggaggggctcttc
ggatccctcgtgcttgccgtttatgatggggaaacgctcatccacgtgggtcaagttggc
acaggattctcatcagactttctgagggagttcacgggaaagctgagagaaattgagatc
cagacaccccacttcagcgagagctttgccagacccgttcactgggtcaagcctgtatac
gtgtgcgaggtggagtacctcgagctcacgaaggactgcaagctgagagctccggtattc
aggcggctcagatacgacaagagcccggaggactgcacagccgaacagatcgaagagtgt
ataaaaaatagggttgttgattga
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