Granulosicoccus antarcticus: IMCC3135_19245
Help
Entry
IMCC3135_19245 CDS
T04938
Symbol
lcfB_5
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K18661
malonyl-CoA/methylmalonyl-CoA synthetase [EC:
6.2.1.76
6.2.1.-]
Organism
gai
Granulosicoccus antarcticus
Pathway
gai00280
Valine, leucine and isoleucine degradation
gai01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gai00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
IMCC3135_19245 (lcfB_5)
Enzymes [BR:
gai01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.76 malonate---CoA ligase
IMCC3135_19245 (lcfB_5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ASJ73928
UniProt:
A0A2Z2NW36
LinkDB
All DBs
Position
complement(4389596..4391110)
Genome browser
AA seq
504 aa
AA seq
DB search
MSKTIFDMFEASCQACADKALFERPGQSSISYQEAMVQARQLASVLKDLGVKPGDRVAAQ
VDKSVEAILLYLACLQTGGVFLPLNTAYTGTEIDYFLNDAEPRLFVCTLASFDEHSKRAT
SSMAVESLGSDADGTLMALAAKAQPLTEVMARSSEDAAAILYTSGTTGRSKGAILTHGNL
ASNCESLIDAWRFESTDRLIHALPIFHTHGLFVACNMALATGATMIFLTRFDVDELIDLM
GSSTVLMGVPTFYTRLLKSSRLTHEATQGMRLFTAGSAPLSAEEHATFQERTGHAILERY
GMTETCMITSNPYDGERRPGAVGMPLPGVEVRIADRESGAALPQGEIGAIEVRGPNVFLG
YWRMPEKTASEFRDDRFFITGDLGLIDADGYLRIVGRDKDLVISGGYNVYPKEVESLIDE
LPEVVESAVIGVAHPDLGEGVTAVVVVRPGMSLDATQIKEALSDKLARYKQPKQVFVVEE
LPRNVMGKVQKNELRVRYADIYKS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaccattttcgacatgtttgaagccagttgccaggcttgcgctgacaaggca
ctcttcgagcgacctggccaatcatccatcagctatcaggaggcgatggttcaagctcgt
caattggcaagcgtgctcaaggatctgggtgtaaagcctggcgatcgtgttgcagcccag
gtggacaagagcgtcgaggcgattctgctgtatctggcgtgtctgcaaacaggcggtgtc
ttcctgccgcttaatacggcttataccggcactgaaattgattattttctgaatgatgcc
gaaccacgactgtttgtctgcacacttgcatcctttgatgagcacagtaagcgggcgaca
agcagcatggcagtggaaagcctgggttctgatgctgatggtaccttgatggcgctggct
gccaaggcgcagcctctgactgaggttatggcgcgatcatccgaggatgcggccgccatt
ctctatacctctggtacaaccggacgctccaagggcgccattctgacgcatggcaatctg
gcctccaactgtgaatcactgattgatgcctggcgtttcgagtccacggatcgtctcatt
catgctttgccaattttccatacacatggcttgttcgtcgcctgcaatatggcactggca
accggtgcaacgatgatctttctgacacgctttgatgtcgatgaactcatcgatctgatg
ggtagctcgaccgtcctgatgggggttccgaccttctatacgcggcttctgaagtcctct
cgtctgactcatgaggccacccaggggatgcgtctgtttactgcaggttcggcacctttg
tcagcagaagaacacgcaacctttcaagaacgaaccggccacgccattcttgagcgttat
ggcatgactgaaacctgcatgattacctccaacccttacgatggcgagcgacgtcccggc
gcggtcggcatgccattgccaggtgtggaagtacgcattgccgacagagagagcggtgcg
gccttgccgcagggggagattggtgcgatcgaggtgcgtggtccgaatgtctttctgggt
tactggcgcatgccggagaagaccgcgtccgagttccgcgatgatcgattcttcatcacc
ggtgatctgggtctgatcgatgcggatggctatctgcgtatcgtcggccgcgacaaggat
ctggtgatatccggtggctacaacgtctaccccaaggaggttgagtcgctcatcgatgag
ttgcccgaagtggtggagtctgccgtgatcggtgtggcacatcctgatctgggggaaggg
gtgacagccgttgttgttgttcgcccgggtatgtctctggatgccacgcagatcaaggaa
gccctgagcgataagctggctcgctacaaacagcccaagcaggtctttgttgtagaagaa
ttgccacgcaacgtcatgggtaaagtgcagaaaaacgagttgcgtgtgcgttacgccgat
atctacaagagctga
DBGET
integrated database retrieval system
