Granulosicoccus antarcticus: IMCC3135_22020
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Entry
IMCC3135_22020 CDS
T04938
Name
(GenBank) Long-chain-fatty-acid--CoA ligase FadD15
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
gai
Granulosicoccus antarcticus
Pathway
gai00061
Fatty acid biosynthesis
gai00071
Fatty acid degradation
gai01100
Metabolic pathways
gai01212
Fatty acid metabolism
gai02024
Quorum sensing
Module
gai_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gai00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
IMCC3135_22020
00071 Fatty acid degradation
IMCC3135_22020
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IMCC3135_22020
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gai01004
]
IMCC3135_22020
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gai04147
]
IMCC3135_22020
Enzymes [BR:
gai01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
IMCC3135_22020
Lipid biosynthesis proteins [BR:
gai01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
IMCC3135_22020
Exosome [BR:
gai04147
]
Exosomal proteins
Exosomal proteins of breast milk
IMCC3135_22020
Exosomal proteins of breast cancer cells
IMCC3135_22020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-ProteinID:
ASJ74476
UniProt:
A0A2Z2NSF0
LinkDB
All DBs
Position
complement(4991416..4993356)
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AA seq
646 aa
AA seq
DB search
MNQLSSKENPVLDTFPKLLAANAARFPDETALREKQYGIWKSQSWSQYNSNVRSIAQGLQ
VLGIKPGEIVGIIGDNRPDWVAAEIAVHACQGVSLGLYRDLMEQELAYLVNYAETRIVFV
EDEEQVDKFLNLEEECSCVEHIIYEDPRGVRKYDDPRLISLESLREQGEAQHKQEPASYE
SLVSAGNGETLAILCTTSGTTSHPKLVMLNARSVIEHCNDYLRVDPKDETDEYVSTLPLP
WIMEQVYAVGMSLISRMTVNFVEESATMLSDLREIGPTFVLFPPRLWEELVATVRARMMD
ASWVKRTLHDHFLSKGLSGFDSNQPSALAEWGLFKALKDRLGLTNVRSAATGGAALGPDT
FKFFLAMGVPLRQLYGQTELLGAYTIHSRDDVDFDTVGVPFCDAIKVRIEQPDAKGIGEI
VTRHDNMFLGYYKDEVASQEDMREGWMHTGDAGYYNSAGHLVVIDRISDLATMNSGLRYS
PQFIENKLKFCPYIGEAVVLGADRDYLTAMICIRYPILSKWAEKQRISFTTYTDLSSRPE
AYELISEEIKRINETLPEAQRLRRFVLLYKELDADDGELTRTRKVRRKVVNQKYEDIIDA
IYTDRQAIEVDTMITFQDGTQQRIQTSIVVHVLDDNKLADAREALS
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagctcagtagcaaagagaatccggtgctggataccttccccaaattactggca
gccaatgcggcccgttttcctgatgagacggcactgcgagaaaagcagtatggcatctgg
aaaagccagagctggtcgcagtacaacagcaatgttcgcagcattgcacaaggtctgcag
gttctgggtatcaagcccggtgaaatcgtgggaatcatcggtgacaatcgacccgattgg
gtagcagccgagattgccgtacacgcctgccagggggtgagcctgggcttgtatcgggat
ctgatggagcaggagttggcgtatctggtcaactatgcagaaaccagaatcgtctttgtc
gaagatgaagagcaggtggacaagttccttaacctggaggaagagtgcagttgtgttgaa
cacatcatctacgaagacccgcgcggtgttcgtaaatacgatgatccacgactaatctcg
ctggagagtctgcgtgaacaaggtgaggcgcaacataagcaagagccagcctcctatgaa
tctctggttagcgcgggtaatggggagacgctggccattttatgtaccacatcgggtacc
acctctcaccccaagctggtcatgctcaatgctcgcagtgtcattgagcactgcaatgat
tatctgcgtgtggatcccaaggatgagacggatgagtatgtgtccacactgccattgccc
tggatcatggagcaggtgtatgcggtaggtatgtcattgatctcaagaatgaccgtaaat
ttcgttgaagaaagcgcaaccatgttgtcagatctgcgtgagataggacccacctttgta
ttattcccacccaggctctgggaggagcttgtcgccacggtgcgcgccagaatgatggat
gccagctgggtcaaacgtacgttgcatgatcattttctgagcaagggtttgagcgggttt
gatagcaaccagccatcagcattggctgagtggggcttgttcaaggcactcaaggatcga
ctcggtttgacgaatgtacgctcggcagcaaccggcggtgccgctctggggcctgatacc
ttcaagttctttctggcgatgggagtgccactgcgacagttatatggccagaccgaatta
ttgggtgcgtacaccatacacagccgtgatgatgtggactttgatacggtgggtgtgcca
ttttgcgatgcaatcaaggtgcgcatcgagcagcctgatgcaaaaggcattggtgaaata
gtcacacgtcatgacaatatgttcttgggctactacaaggatgaggttgccagccaggag
gatatgcgcgaaggctggatgcacacaggggatgctggttattacaactcagcaggacat
ctggttgtcattgatcgcatatcggatctggcaacgatgaacagcggcttgcgttattca
ccgcagttcattgagaacaagctcaaattctgcccctatatcggtgaggcggtagtgctg
ggtgctgatcgtgactatctgactgccatgatctgcatccgctacccaattctgtccaag
tgggcggagaaacaacgaatctcgtttaccacctatacagatctgtcatcgcgccctgag
gcctatgagctgatatctgaggagatcaagcgtatcaacgagaccttacccgaggcccag
cgcctgcgacgatttgtcctgttgtacaaggagctggacgctgatgatggtgagctgacg
cgcacgcgcaaagtgcggcgaaaggtggtcaaccagaagtatgaagacatcatcgatgcc
atctataccgatagacaggctattgaggtggatacgatgatcacgttccaggacggtaca
cagcagagaatacaaacctcgatcgtggtgcacgtccttgatgataacaagcttgctgat
gcccgggaggcgctgtcatga
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