Gottfriedia acidiceleris: MY490_04605
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Entry
MY490_04605 CDS
T08082
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
gaj
Gottfriedia acidiceleris
Pathway
gaj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MY490_04605 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaj03400
]
MY490_04605 (mutM)
Enzymes [BR:
gaj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MY490_04605 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MY490_04605 (mutM)
DNA repair and recombination proteins [BR:
gaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MY490_04605 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DACNH
zinc-ribbons_6
eIF-5_eIF-2B
RNHCP
Zn-ribbon_8
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
UPM55128
LinkDB
All DBs
Position
977083..977916
Genome browser
AA seq
277 aa
AA seq
DB search
MPELPEVETVRRTLLDLIVGKTISTVIVSWGKIIKKPNEVDEFQILLKGQTIENINRRGK
FLLFQLSDFTLVSHLRMEGKFRVFPADEPVASHTHVRFLFEDGTELRYQDVRKFGTMHLF
NKGEENEGPPLAKLGPEPFSDEFTADYLRKKLESTNRKIKIVLLDQELVVGLGNIYVDEV
LFKAKIHPETPASSLKPKQIKILAESITATLQEAVDLGGSTIRSYVNSQGQIGTFQDIIK
VYGRKGLECHNCGQPIEKIKVGGRGTSFCPVCQPKKN
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaagttgaaacggtcagacgaactttactggatttaatagttggg
aaaacaatctcaacagtaatcgtttcgtggggaaaaataataaagaaacctaatgaagta
gatgagtttcaaattttactaaaaggtcaaacaatagaaaatataaatcgtcgaggtaag
tttctactttttcaactaagtgattttacacttgtttcgcatttaagaatggaagggaaa
tttcgtgtgttcccagcggatgaacccgtagcatctcatactcatgttcgattcctattt
gaagatggaacagaacttcggtatcaagatgttcgtaaatttggcacaatgcatttattt
aataaaggtgaggagaatgagggaccaccacttgctaaattgggtccagagccattttcc
gatgaatttaccgcggattatttaagaaaaaagctagaaagtacaaaccgaaaaattaaa
atcgttttattagatcaggagttagtagtcggtttaggcaatatttatgtcgatgaggtt
ttgtttaaggctaagattcatccggaaacacctgcatcatcattaaagcctaaacaaata
aaaatacttgccgaatccattacagcaactttacaagaagctgtggatttaggtggaagc
acaattcgttcttatgtaaattcacaaggtcaaataggaacttttcaagatatcataaaa
gtatatggcagaaagggtttagagtgtcataattgcggccaaccaatagaaaaaataaaa
gttggcggcagaggtacttctttttgcccagtctgtcagcctaaaaaaaattaa
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