Gallibacterium anatis: UMN179_00053
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Entry
UMN179_00053 CDS
T01482
Name
(GenBank) exonuclease V beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
gan
Gallibacterium anatis
Pathway
gan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
UMN179_00053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gan03400
]
UMN179_00053
Enzymes [BR:
gan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
UMN179_00053
DNA repair and recombination proteins [BR:
gan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
UMN179_00053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
ResIII
AAA_12
AAA_30
DEAD
SP24
Endotoxin_C
Motif
Other DBs
NCBI-ProteinID:
AEC16090
UniProt:
F4HA58
LinkDB
All DBs
Position
complement(60339..63938)
Genome browser
AA seq
1199 aa
AA seq
DB search
MNTPLNVITLPLAQNNIIEASAGTGKTYTMVTLYLRLLLQAGENNFPTPLDIEQILVVTF
TRDATRELRQRIRERTQSWLKLLESYQQNRDKSEIKDNELLALLPYLEDHLALAIQRLSF
ACEYIDKAAIFTIHGFCQRILRQYAFDSGLGFKFELSEQNQEQLRQVNYQLWRDKFYSIS
AEQAQIVRQVFVSPDKLFKQNERLLTGELPKIKQALPFTDISAGLDYYQQQLQQFQRLEQ
QYLAEFIDWFKQYEANLNQQRSKSKKFTDYFDAVISATTTIEQRIALAEKLLPIYFKKNK
EVELPTFVVEMEHFLQQFSQNDFCQKMHYLYVAELRQRIFEYQDNHNEKQFDDLLRMLRD
VLQKPSAHKLIALIRQQYPFAMIDEFQDTDPVQLAIFSKIYLQAVTNETTTGFTVIGDPK
QAIYRFRGADIFTYLSIKDSSEQHQAIEHIYTLQRNYRSSAKLIESINNLFLNAKNPFYL
DEIEFIPVEAAQQTSAFYVEGQAQKAWQLLQLAQDENKSVTMEIMAQAFASHLQQLLIAS
QQGNAYFCADGQEQQAVSAKDIAILVRNGKESDIIRRALTQKGIASVYLSERSNVFTSVA
AKDLYRILRACLTPFNERAVLAAVGCTLWGLTADQIYQLKQNETEWAALIERLLHYQTVW
QTQGVLPMLYQLFQAEQIPLRLQQFDFSERYLVDLLHLSELLQQAMNQQQNEEALLNWFE
LQLSGNSDNEENRLRLEREQNVVSIITIHKSKGLEYPLVCLPFILNSASNRKETFGFYHD
EQKQLVWDLHHQQTEKVEQEAKAEEMRLLYVALTRAKYQLIVGVPATFNAINNKSRKWDS
KKLTALDYLLLGGQQHAEQKEVSYTTLLTKTLVDNYEIQKVTEADDMRFQMKVVTPSHLS
ARQFHQNIEKNWRVTSFSALQAKLQALYGEHLSDNAQDYSDNAIEIDDEETAPSVMPLSI
YPPHFTPFDLPKGAGVGSVLHAFLEKLDFTQPLKTPSLQTLCQYLGLDEQWLEPLRIWFS
NILQQPLPEMGCLANVASTDKLTEMQFYLKLGNLFNQQQFNQILSQYHPLYDQQHPVQIE
EIQGVIRGFVDLVVRQNGKYYLIDYKSNFLGDGIEYYQPEKLAKAISSQRYDLQYLIYSL
ALHRYLKWRDPNYRYATDFGGVFYLFLRGMAVQNNAQTGVYFTKPSVELIEKLDQLWGE
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgccactgaatgtgattacattgcctttagcacaaaataatattattgaggct
tctgccggcaccggcaaaacgtatacgatggtgacgctctatttgcgtttattgctacag
gcgggcgagaataatttccctacgccgttggatattgagcagattttggtggttactttc
acacgggacgcgacacgggaattgcgtcaacgcatccgtgaaagaacccaatcgtggtta
aagttattggagagttatcagcaaaatcgtgataaaagtgaaattaaggataatgagctg
ctggcattattgccttatttggaagatcacttagcgcttgcgattcagcgtttatctttt
gcttgtgaatatattgataaagctgcgatttttactattcacggcttttgtcagcgtatt
ttgcgccaatatgcttttgattcaggtttaggttttaaatttgagttgtcggaacagaat
caggagcagttacgacaggtcaattatcagttgtggcgagataaattttattccatttcg
gcagaacaggcacaaattgtgcgtcaggtttttgtttcgccggacaaactatttaaacag
aatgaacgcctgttgacaggcgagctgcctaaaatcaagcaagcgttgccgtttactgat
atcagtgccggattggattattaccagcagcaactgcaacagtttcaacggcttgagcag
caatatttagcagaatttatcgattggtttaaacagtatgaagccaatttgaaccagcaa
cgctcaaaatcaaaaaaatttaccgattatttcgatgcggtgatctcggcaacgacaacg
attgaacagagaattgccctagcggaaaaattgttgccgatctattttaagaaaaataaa
gaggttgaactgccaacttttgtggttgagatggaacattttttgcaacagttttcgcaa
aatgatttttgccaaaaaatgcactatctttatgtggcggaattacggcaacgcattttt
gaatatcaagataaccataatgaaaagcaatttgatgatctgttgcggatgttgcgcgat
gttctgcaaaaaccgtcagcccacaaattaatcgctttgattcgccaacaatatccgttt
gctatgattgatgagtttcaggatactgatcctgtacagttagccattttttcaaaaatt
tatctacaagctgtaacaaatgaaaccaccaccggatttaccgtaatcggcgatcctaaa
caggcgatttatcgcttccgtggtgcggatattttcacctatttatcgatcaaagacagc
agtgaacagcaccaagcgattgaacatatttatacgttacaacgtaattatcgttcaagt
gccaaattgattgaaagcattaacaatttgtttttaaacgcaaaaaatccgttttatttg
gatgaaattgaatttattcctgttgaagcggcgcagcaaacgagtgctttttatgttgag
gggcaggcgcaaaaagcgtggcaactgttgcaattagcacaggatgaaaacaaaagtgtg
acaatggagataatggcacaggcgtttgcttcacatttgcagcagctattgatcgcttcg
caacaaggcaacgcttatttttgtgctgacggacaagagcagcaagcagttagtgcaaag
gatattgcaattttggtgcgtaatggtaaagagagcgacattatcagacgcgctttgaca
caaaaaggcattgcttcggtttatttatcggaacgttccaatgtatttaccagtgtggcg
gcaaaagatctttatcgtattttacgtgcctgtttaacaccgtttaacgaaagggcagtg
ttggcagctgtaggttgtaccttatgggggctgacagcggatcaaatttatcagttaaaa
cagaatgaaacagagtgggcagcgttgattgaacgtttgctgcattatcaaacagtgtgg
cagacacaaggcgtgttaccaatgctgtaccaacttttccaagcggaacagattccgtta
cggttgcaacaatttgatttcagtgagcgttatttggttgatttattgcatttaagcgaa
ttattgcaacaagcgatgaaccaacaacagaacgaagaggcgttgcttaactggtttgaa
ttacagttaagcggcaacagtgataacgaagagaaccgcttgcgtttggagcgagaacaa
aatgttgtcagcattattacgattcataaatcgaaaggtttggaatatccgcttgtttgt
ttgccgtttattctcaattcagcgtcaaaccgcaaagagactttcggtttttatcacgat
gaacagaaacaattagtttgggatttgcatcatcagcagacggaaaaggtggagcaggaa
gcgaaagcggaagagatgcgtctgctttatgtggcgttgacacgggcgaaatatcaatta
attgtaggcgtgccggcaacctttaatgcgatcaataataaatcgagaaaatgggatagc
aaaaagttaactgcgctggattatctgctattgggcggacaacagcacgctgagcaaaaa
gaggtgagttataccacattattaacaaaaacattggtagataattatgaaatacaaaag
gtgactgaagcagatgatatgagatttcaaatgaaggtggtaacaccaagtcacttatca
gcacggcaatttcatcaaaacattgaaaaaaattggcgagtaaccagtttttccgcttta
caagcgaaattgcaagcattgtatggtgaacatttaagcgataatgcgcaggattatagc
gataatgcgattgaaatagatgacgaagaaacagcgccttcggtaatgccgctttctatt
tatccgccacattttactccgtttgatctgccgaaaggggcgggtgtcggttcggtgttg
cacgcttttttagaaaaattggattttacacaaccgctaaaaacgccatcgttacaaacc
ttatgtcaatatctcggtttggatgaacagtggcttgagccattgcgtatttggtttagc
aatattttgcaacagccattgccggaaatgggctgtttggcaaatgttgcttcgacagat
aaattaacggaaatgcagttctatctcaagttaggcaacttgttcaatcagcagcaattt
aatcaaatattgagccaatatcatccgttgtatgaccaacaacatccagtacagattgaa
gagattcaaggtgttattcgagggttcgttgatctggttgtcagacagaatggaaaatat
tatctaattgattataaaagtaattttttaggagatggcattgaatattatcagccggag
aaattggcaaaagcgatctcatcgcaacgttacgatttgcaatatctgatctacagtttg
gcattacatcgttatctgaagtggcgtgatccgaattatcgctatgcaaccgatttcggt
ggcgtgttttatctgtttttacgcggaatggcggtgcagaataatgcgcaaacaggggtt
tattttacaaagccgtccgttgaattgattgaaaaattggatcaattatggggtgaatga
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