Gracilinanus agilis (agile gracile opossum): 123241010
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Entry
123241010 CDS
T07702
Symbol
KDM1A
Name
(RefSeq) lysine-specific histone demethylase 1A
KO
K11450
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase [EC:
1.14.99.66
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04714
Thermogenesis
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
123241010 (KDM1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gas03036
]
123241010 (KDM1A)
Enzymes [BR:
gas01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.99 Miscellaneous
1.14.99.66 [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase
123241010 (KDM1A)
Chromosome and associated proteins [BR:
gas03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
123241010 (KDM1A)
REST complex
123241010 (KDM1A)
Histone demethylases
123241010 (KDM1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
SWIRM
NAD_binding_8
DAO
Pyr_redox_2
AlaDh_PNT_C
Pyr_redox
FAD_binding_2
FAD_oxidored
HI0933_like
FAD_binding_3
Thi4
GIDA
MRPL52
2-Hacid_dh_C
Pyr_redox_3
Lycopene_cycl
MutS_IV
Motif
Other DBs
NCBI-GeneID:
123241010
NCBI-ProteinID:
XP_044524654
LinkDB
All DBs
Position
3:59959291..60063626
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AA seq
738 aa
AA seq
DB search
MLFGPKALWLPISTYRFFTPFNQSPLNKAMFIEQNGYAGQAGGLQDDNSGGYGDGQASGV
EGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLFIRNRTLQLWLDNPKIQLTFEAT
LQQLEAPYNSDTVLVHRVHSYLERHGLINFGIYKRIKPLPAKKTGKVIIIGSGVSGLAAA
RQLQSFGMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMELA
KIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQALEV
VIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDI
TAEFLVKSKHRDLTALCKEYDELAETQVKLEEKLQELEANPPSDVYLSSRDRQILDWHFA
NLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVR
YTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRM
GFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGI
MENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYD
LMAQPITPGPAIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMY
TLPRQATPGVPTPQPPSM
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgctcttcgggcccaaggctctgtggctgcccatctccacctaccggttcttcactccc
ttcaaccagtctcccctcaacaaagcaatgtttatagagcaaaacgggtatgctgggcaa
gcaggaggacttcaagacgacaattctggagggtatggagacggccaagcatcaggtgtg
gagggtgcagctttccagagcagactccctcatgatcggatgacatcacaagaagctgcc
tgtttccctgatattattagtgggccacagcaaacccagaaggtttttcttttcatcagg
aaccgcacattgcagttgtggttggacaatccaaaaattcaattgacgtttgaggcaact
ctgcagcagttggaagcaccttataacagtgatactgttcttgttcacagagttcacagt
tacttagaacgtcatggtcttatcaactttggcatctataagagaataaagcccctacca
gctaaaaaaacaggaaaagtcatcattattggttcaggggtttcaggcttggcagcagct
cgacagttgcagagttttggaatggatgttacccttctggaagcccgggatcgtgtgggt
ggaagagtagctacctttcgcaaaggaaattatgtagctgacctcggcgccatggtggta
acaggtcttggagggaatccaatggctgtggtcagcaaacaagtaaatatggaactggcc
aagatcaagcaaaaatgcccactttatgaagccaatggacaagctgttccaaaagaaaaa
gatgaaatggtggaacaagagtttaatcgacttttggaagccacatcctacctcagtcat
cagctagacttcaatgtcctcaacaataagcctgtctctcttggtcaagccctggaagtt
gtcatacagttacaggaaaagcatgtgaaagacgagcagattgaacattggaagaagatt
gtgaaaactcaggaggaattgaaggaacttcttaataagatggtgaatttgaaagagaag
atcaaagaactccaccagcagtataaagaagcatctgaagtaaagccacctcgagatatt
acagcagaattccttgtaaaaagtaaacaccgggatctcacagccctttgcaaggaatat
gatgaattggcagaaacacaagtaaaactagaagagaagctacaagagctggaagccaat
cccccaagtgatgtatatttatcctcaagagacaggcagatccttgattggcattttgca
aatctagaatttgctaatgccacacctctgtctactctttctcttaaacattgggaccag
gatgatgattttgagtttactggaagtcacttgacagtgaggaatggctactcctgtgta
ccagtggcccttgctgaagggctggacattaaattgaatacagcagttcgacaagtacgt
tacacagcttctggatgtgaagtgattgctgtgaatactcgctctaccagccagaccttc
atttataaatgtgatgctgttctctgtactcttcccttgggtgtactgaaacagcagcca
ccggctgttcaatttgtgccacctcttcctgagtggaaaacctctgcagtgcaaagaatg
ggatttggcaacctaaacaaggtggttttgtgttttgaccgagtgttctgggacccaagt
gtcaatttgtttggtcatgtcggcagcactactgctagtaggggagaacttttccttttc
tggaacctctataaagctccaattcttttggctcttgtggcaggagaagcagctggcatc
atggaaaatattagtgatgatgtgatagttggacgctgtctggccatactcaaaggcatc
tttggaagtagcgccgtacctcagcctaaagagacagtggtgtcacgatggcgagccgat
ccctgggcccgggggtcctactcctacgtagcagctggatcatcaggcaatgactatgac
ctgatggctcagccaattactccagggcctgctattccaggtgcccctcagcctatccct
cgactgttctttgcaggtgaacacacaatccgcaactacccggcaaccgtccacggcgct
ctcctgagcgggctgagagaagccgggcggatcgcagaccagtttctaggtgctatgtac
acgcttcctcgccaggcaacccccggggtccccaccccgcagccccctagcatgtga
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