Gracilinanus agilis (agile gracile opossum): 123245905
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Entry
123245905 CDS
T07702
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04115
p53 signaling pathway
gas04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123245905 (COP1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
123245905 (COP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gas04121
]
123245905 (COP1)
Enzymes [BR:
gas01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123245905 (COP1)
Ubiquitin system [BR:
gas04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123245905 (COP1)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
123245905 (COP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
WD40
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
WD40_like
zf-rbx1
zf-RING_10
zf_C2H2_10
zf-RING_11
Sina_RING
Motif
Other DBs
NCBI-GeneID:
123245905
NCBI-ProteinID:
XP_044530824
LinkDB
All DBs
Position
4:complement(70120339..70438171)
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AA seq
723 aa
AA seq
DB search
MSSSRQAGPGAAGTGPGSSAASSVTSASSSSSSSSSSPSPPSLTAVVAAAGSSGAAGSGG
LGAAVRPLLVAAAGSGSGGGGGGGALAAGLSRLGGSTRPGSAVNGGSGSGGAGSSGSGSR
KRPLLTPLCNGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCP
KCNYVVDNIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQD
NLDLPNVNLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEE
DIKRVEEMSGLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGSSQTKKQPWYNS
TLASRRKRLTAHFEDLEQCYFSTRMSRVSDDSRTASQLDEFQECLSKFTRYNSVRPLATL
SYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNS
KISPAKWPGLSKSPALSSTTSVTLLPCGVSNLLLFRFPVSTLLYSQGYCMKLWSTNLDNS
VASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFV
SGEEIVSASTDSQLKLWNVGKPHCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYY
KGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVL
ELV
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcagccgccaggctgggcctggagctgctgggacagggcccggctcctccgcg
gcctcctcagtcacttccgcctcgtcgtcgtcgtcctcgtcttcgtcgtcgccgtcgccc
ccgtccctaactgcagtggtggccgcggcggggtccagcggggccgccggctctgggggt
ctcggggccgccgtgcggcctctgctggtggccgccgccgggtcgggctcgggcggcggg
ggtggtggcggggcgctggctgcgggcctctcccggctcgggggctcgaccaggcccggg
agcgctgtgaacggcggcagcggcagcggcggagccggcagctcgggcagcggtagcagg
aagcggcctctgctcaccccactctgcaatgggctcatcaactcgtacgaggacaaaagc
aacgacttcgtctgccccatctgttttgacatgattgaagaagcatacatgacgaaatgt
ggccacagtttctgctataaatgtatccatcagagcctggaagacaataataggtgtccc
aagtgtaattatgttgtggacaatattgaccatctttatcctaacttcttagtgaatgaa
ctcattctcaaacagaagcaaagatttgaggaaaagaggttcaagttggaccattcagtg
agtagcaccaatggtcacagatggcaaatatttcaagatttattgggaactgatcaagat
aaccttgatttacctaatgtcaacctgatgttggaactacttgttcaaaagaaaaagcag
ctggaggcagagtcacacgctgcccaactacagatccttatggaattcctcaaggttgca
aggagaaataagagagagcaactggaacagattcaaaaggagctaagtgttctggaggag
gatattaaacgagtggaggaaatgagcggtttgtactctcctgtcagtgaggatagtaca
gtgcctcagtttgaagctccctctccatcacacagtagtattattgattccaccgaatat
agtcaacctccaggtttcagtggcagctctcagacaaagaagcaaccttggtacaacagc
acattagcatcacgacggaaacgcctcactgctcattttgaagatttagagcaatgctac
ttttctacaaggatgtctcgtgtctcagatgacagtagaactgcaagccagttggacgag
tttcaagagtgcctttccaagtttactcgatacaattcagtccgacccttggctaccttg
tcttatgctagtgacctctataatggttcaagcatagtctccagtattgaatttgaccga
gattgtgactattttgccattgctggggtaacaaagaagatcaaagtatatgaatatgga
acagtcattcaggatgcagtggatattcattacccagaaaatgaaatgacctgcaattcc
aaaatcagccctgccaaatggcctgggctgagcaagtcccctgctctcagctctaccaca
tcggtcactctgctaccatgtggagtgagtaatttactattgttccgattccccgtttct
actctcttgtattcccagggctactgcatgaaactgtggtctaccaatttggacaattca
gtggcgagtattgaggcaaaggctaatgtgtgttgtgtcaaattcagcccatcttctagg
taccatttggcttttggctgtgcagatcactgtgtccattactatgatcttcgcaacact
aaacagccaattatggtgttcaaaggacatcgaaaagcagtttcctatgcaaaatttgtg
agtggggaagaaattgtttctgcgtcgactgatagccagctgaagttgtggaatgttggg
aaaccacactgtttgcgttccttcaagggccatatcaatgaaaagaattttgttgggttg
gcttccaatggagactacatagcttgtggaagtgaaaataattctctctacttatactac
aaaggcctttcaaagacattgctgacttttaagtttgatacggtcaaaagtgtcttagat
aaggatcggaaagaggatgacacaaatgaatttgttagtgctgtttgttggagggcactg
ccagatggggagtccaacgtgctgattgctgctaacagtcaggggacaattaaggtgctg
gaactggtctga
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