Gasterosteus aculeatus (three-spined stickleback): 120809124
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Entry
120809124 CDS
T07457
Symbol
phrf1
Name
(RefSeq) PHD and RING finger domain-containing protein 1 isoform X1
KO
K17586
PHD and RING finger domain-containing protein 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gat01009
]
120809124 (phrf1)
Protein phosphatases and associated proteins [BR:
gat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120809124 (phrf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
zf-RING_2
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-C3HC4_4
zf-RING_5
PHD_2
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
120809124
NCBI-ProteinID:
XP_040018665
LinkDB
All DBs
Position
XIX:complement(10557600..10570150)
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AA seq
1732 aa
AA seq
DB search
MDEDDSQDELINRSASHSKGKRTALWAISDDSDSGEEESEEGESDSGEEEEEGHRDGEDD
EEDDDDDEEEEEDEEEDDGVEEGDAKAEDGASGGIPIDLAEMSSDEDAEKCPICLNSFSS
QPVATPESCEHYFCLDCILAWAKNANSCPVDRIAFNSIYLRKCYGGKVKKMITVQKPVKE
GLEEVIDVDLEQTRCEVCRGSDREDRLLLCDGCDAGYHMECLTPPLDSVPVEEWFCPGCE
ASNRHSRASADDVSDAESLPSTARPATSRPQSAAAGPTRAIARTQQSERVRANVNRHRIT
QARSSQLAPTYLIQSNWLDDTINAVVSGLNTAVYIRDLTPRVPSSSRRKTGKRRKVRRRK
TSSATGKSGTGARRRRRKVRRTKSRKNLMLQKAATPRGRIASNLRIVKDTKNSSLPTVYR
PSEQTLSSMRADIGAASLSIYGDPFDLDPFVDRIDLNSDGEGQQARVTTILEAKRRGISR
SALRSHQPVARPVTAGVSRRGMNIHQSGGDVEVSPVPDLLGSILSGQSVLLMDSSDVVIN
RDGTLKAIKPTMPSALNPSCSSSGDAGAQLSPGMSPNQGDAAQSSSSNGDLAGSSHRSMN
RTTPQSSSRLPPQMPCSASHIHPPSHSDLPPRGHPRLQPPRPLGPTRPPGHWRNVGVEEP
GPSSSVHPALSSASKSKGGASSRSQHQKATTKPAWVDVSVLPRIPKIKRESSGIAQEGTS
HGGSNKSSSSSSSSSSSGGGTGNGSNSASGSNGYRVPETGMTCFTGDKGRQQSVDRQKGR
PDGPAPRQRPDGSGSSSTFSNSFSSSSSSSSSPGGSSASHPHYSLPSSSSSAVSFRINSS
GNSWQSRQLSSSSSSPAGGGAQTSRSAKADEAKKRQMHRDKKMLLASRVLGSKEPDSETI
YDPFDPTLSDSSSSGGEAESAALEVHAHHPALQGKPPGLANKKVLVKSERDLVSVKAERQ
EVDVSQKEPRRTGAQQKAKCSYDNVKVEEEHRSIDIKTEKQTSLLATSKVKTEPGLVDTG
EDERFGRSGKSFKSEKADDTTAAYQSLRALKTEREALDEESGQSVDCESSSSAPSAAPTE
KKLKLETSDSKPSPASKDLGQEKNSFRAAKEIRCSSSERDRDCRADHRAVGQEGRLRGKE
KERGRSSRETTRRARSTSESSLWNSPDETRRKRRRSRSRDRRRSRSGSSSSSKERSRKKK
PEQKSKERSDDRERDCDRRRVSTDKRRGRSRSRSQEKKNVRSCSRSRSRSRERRKDHTQL
QPSSLSSRDKESQSRERKGHGSRSSSREKKKEGSPSKSSQKTCISSSKDTKLLQGKKKDK
DVSQSSLKDDKAAAVTKLRIAATEIRKKDKDCLSATVEILKEIKIEKDIKKEKQQSLGMF
EDCCSPAQQIKKEEPDARRPTAAKDEEGSREDPIKTEMFEIKTEICEAPFVKSEPGSPEL
CHFTSSPAPITADALREAPAAASHAESTAPVGQPGASGLPLPVKQEVLQPSDDDDDDDDF
NVDVMLDNLDRVKSECAGESAACVEQKPEVGEEKKEPVSAAGGAKAKAQVKRVTWNIQEP
EGPQPQKSASKLSLYKLKLKQEGARRPSSAVQTSSQEIPGAARHPSKTTAVGPLSSSSTS
EGEQGDAEEGDLPRKDQYLKKLHMQERAVEEVKLAIKPFYQRRDIDKDEYKEILRKAVQK
VCHSKSGEINPVKVGNLVKAYVDKYKHARKHRKGEDSGQAQEAEDGRTSDSP
NT seq
5199 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagacgacagccaagatgagctgatcaaccgcagcgcgtcccacagcaaaggg
aagaggaccgcgctgtgggccatctcagatgactcagacagtggtgaagaggagtctgag
gagggagaatctgacagtggtgaggaagaagaagaggggcatcgagatggagaggatgac
gaagaagacgacgacgacgatgaggaggaggaggaagatgaggaggaagatgatggcgtc
gaggagggagatgctaaggccgaggatggagcttctgggggaatccctattgatcttgcg
gagatgagctcggacgaggatgcagaaaagtgtcccatctgccttaactcattcagcagc
cagcctgttgcaacaccagagagctgcgagcactacttctgcctcgactgcatcctcgca
tgggccaagaatgccaactcttgtcccgtagaccgcattgccttcaacagcatataccta
agaaaatgttatggaggcaaggtgaagaaaatgatcacggtacaaaagcccgtgaaggaa
gggctagaggaagtaatcgatgtggacctggagcagaccagatgtgaagtctgtaggggg
agtgaccgcgaggaccgtctattgctctgcgatggctgtgacgctgggtatcacatggaa
tgtctcacgcccccccttgactctgttcctgtggaggaatggttctgccctggatgtgaa
gccagcaatcgtcactcaagggcttcagctgatgatgtgagtgatgcagagagcctgcca
tctactgcccgccctgccaccagtcgcccccagtccgccgctgcaggtcccaccagagct
attgcccgaactcagcagagcgagagggttcgggcaaacgtcaatcgccatcgcatcaca
caggcacgctcatcgcagctggctcccacgtatctgattcagtccaattggctggacgat
actatcaatgccgttgtgtccgggctcaacacggccgtgtatatacgggacttgacacct
cgtgtcccatcgagcagcaggcgcaagaccgggaagcgcagaaaggtaagaaggaggaag
acgtcctctgctacgggtaaatccggcacaggagcccgcaggcggagacggaaagtgaga
agaactaaatcccgaaaaaatctgatgttgcaaaaggctgccacccctcggggccgtatc
gccagtaatctcagaattgtaaaggacacgaagaactcttcgcttcctacagtctaccgg
ccgtcagagcaaacgctgagcagcatgcgcgctgacataggtgcagcatccctctccatc
tatggagatccattcgacctggatccatttgtggatcgtatcgatttgaacagcgacggg
gaaggacagcaggcccgtgttacaacgatcttggaggccaagagacgagggatctctcgc
tccgctcttcgctcccaccagccggtagctcgcccagtcactgcaggtgtttccaggaga
ggtatgaatatccaccaatcagggggcgatgtggaggtttctcctgtacccgacctcctg
ggcagcatcctgtcgggacagagtgtcctcttgatggacagctctgatgtcgttattaat
cgggatggtacccttaaagctataaagccaacgatgccgtccgcgttaaatccaagttgc
agtagctcaggagacgccggcgcccagctcagcccggggatgtcgccgaaccagggagac
gctgctcagtcttccagctccaacggagacctcgcggggtcctcccacaggtctatgaac
agaactaccccccagagctcttctcgcttgcccccccagatgccctgctcagccagccac
atccacccaccctcccattcggacttgccacccagaggtcatccgaggctccagccgcct
cgtccattaggacccacacgccctcctggtcactggagaaacgtcggagttgaggagccc
ggcccctcttcctccgtccaccccgcgctcagctccgcctccaagagtaagggaggggcc
tcatcccggtcccagcatcaaaaagcaactacgaagcccgcgtgggtagatgtgtcagtg
cttcccaggataccaaaaataaaaagggagagcagtggcatcgcacaggaaggcactagc
cacggcggcagcaataaaagcagcagcagcagcagcagcagcagcagcagcggcggcggg
acaggcaatggtagtaattctgccagcggtagtaatggttaccgtgtgccagagacaggc
atgacctgctttactggggacaaggggaggcagcaaagtgtggaccggcaaaagggtcga
cccgatggtccggctccgaggcagaggcccgatggatccggctcctcctcaaccttctcc
aactcgttctcctcctcctcttcttcttcgtcgtcccccggcggctcttctgccagccac
ccgcattactcccttccttcctcgtcatcgtcggcggtaagcttccgcattaactccagt
gggaactcctggcagtcgaggcagctgagcagctcgtcgtcctcgcctgctggaggcggt
gcgcagacatctcggagtgcgaaggcagatgaggcaaaaaagcggcagatgcacagggac
aaaaagatgctgctggcatcacgcgtgctgggcagtaaggagccagacagtgagaccatc
tatgatccctttgatcccacactgtcagactccagcagctcaggtggcgaagctgagagc
gcagccctggaggtgcacgcgcatcatcccgcacttcaggggaagcctcccggtttggcc
aataaaaaggtactcgtgaaaagcgagcgggacctcgttagtgtgaaagctgaaaggcag
gaggttgacgtctcacagaaagaaccaagaagaacgggtgctcagcagaaggccaaatgc
tcatatgacaatgtcaaggtagaagaagaacatagatcaatagacatcaagactgagaaa
caaacgtcgttactcgccacttccaaagtgaagactgagcccgggttagtggacacagga
gaagatgaaaggtttggtcgcagcggaaaaagtttcaagtcagagaaagcggatgacacc
acagccgcttatcaaagtctgcgtgctttaaagactgagagagaggccctcgatgaggag
agtggacaaagtgttgactgtgagagcagttcatcagccccgagcgccgcccccaccgag
aagaagctcaagcttgaaacatcagattccaaaccctctcccgcgtcaaaagatttaggc
caagagaagaattccttcagggctgcaaaggagatacgctgtagcagttcagagagggac
agagactgcagagcagaccatcgggccgtgggccaggaaggccgactgagagggaaggag
aaggaaagaggacggagctccagagagacgacgagaagggcgcgctcgacttcagaaagc
tccttgtggaattccccagatgagactcgcaggaagagacggcggtccagatccagagac
aggaggcgatctaggtctggttccagctccagcagcaaagagcgttcaaggaagaagaaa
ccagaacaaaagagcaaggagcgctctgatgaccgagagagagactgtgacagaagacgg
gtatcaacggacaagagacgcggccggtccaggtccaggtcacaggaaaaaaaaaatgta
cggtcttgctccagatcccgatcccgatcgagggaaaggaggaaagaccacacgcaactg
caaccatcgtccctctcctccagagacaaggagtcacagtcaagagagaggaagggacac
gggtctagatcgagctcaagagagaaaaagaaagaagggtcaccatcaaagagttctcag
aaaacctgcatttcgtcctctaaagacacaaaactcttacagggcaagaaaaaagacaag
gatgtcagtcaaagctccctcaaagacgacaaagctgccgcagtgactaaactgagaatt
gccgccactgaaattagaaagaaagacaaagactgcttgagcgcaaccgtggaaatattg
aaagagataaaaattgaaaaagacattaagaaagaaaaacaacaatctcttggcatgttt
gaagactgttgttctcctgcgcaacaaatcaagaaagaagaacccgacgctcgtcgtccg
accgcagctaaagacgaggagggaagcagagaagaccccattaagacggagatgtttgaa
atcaagacggagatctgtgaagcccccttcgttaaatctgagccaggttccccagagttg
tgccacttcacctcgtcccctgccccgatcacggcagacgctctccgggaagcgccggcc
gctgcgtctcacgcagagtccacggcccccgtgggacaaccgggcgcctccgggctgcct
ctccctgtgaagcaggaagttctgcaaccctcagacgacgacgacgatgacgacgacttt
aacgtggacgtcatgctggacaatctggaccgtgtgaagtctgagtgcgcaggggaaagc
gccgcgtgcgtcgaacaaaagccggaggtcggagaggagaagaaagaaccggtgtctgct
gcagggggagcaaaagctaaggctcaggtgaagagggttacctggaatatacaggagcct
gaggggcctcagccacagaaatctgcaagcaagctttctctgtacaaattgaagctgaag
caggaaggagctcgcagaccctcttcagccgtccagacctccagtcaggaaattcccgga
gctgccagacacccctccaagaccactgctgttggtccgctcagttcctcctcgacatcc
gaaggggagcaaggagacgcggaggaaggggatttgccgaggaaagaccagtatttgaag
aagctgcacatgcaggagcgagctgtggaagaggtgaagcttgccatcaagcctttctac
cagaggagggacatcgacaaggacgagtacaaagagatcctacgcaaagccgtccagaag
gtgtgccacagcaagagtggggagatcaaccctgtgaaggtgggcaatctggtcaaggca
tacgtggacaaatacaaacacgcaaggaaacacaggaaaggagaggactcgggacaggca
caggaggctgaggatgggaggacctctgacagcccatga
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integrated database retrieval system
