KEGG   Gasterosteus aculeatus (three-spined stickleback): 120816198
Entry
120816198         CDS       T07457                                 
Name
(RefSeq) histone deacetylase 4-like isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:gat00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    120816198
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gat03036]
    120816198
Enzymes [BR:gat01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     120816198
Chromosome and associated proteins [BR:gat03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     120816198
SSDB
Motif
Pfam: Hist_deacetyl HDAC4_Gln fn1
Other DBs
NCBI-GeneID: 120816198
NCBI-ProteinID: XP_040027597
LinkDB
Position
I:complement(25730372..25748968)
AA seq 1088 aa
MVDINSALPLRLPPAAIPMDLRVDQHHQHHQQHHQQQQQQVSSLSPPGQQSPGPGLVGAA
CQAGGGVREQQLQQELLTLKQKQQIQRQILIAEFQRQHEQLSRQHEVQLQEHIKVPPARS
LSMAVRLLHGSVQQQELLALKHQQELLEHQRKMENHRLEQELEKQQREQKLLLLKNKERG
QESAVASTEVKMRLQEFVLNKKKALAQRSLNQGGLHNDAPYWYRKTQHSSLDQSSPPQTG
VSTYNHPVLGVYNPRDDFPLRKTASEPNLKLRSRLKQKVSERRSSPLLRRRDSPITSAKK
RSLDMADSACSSAPGSGPSSPNNSSNNIPNENGITASVANNTEASLAQRLCGAERGSVNQ
LSLYTSPSLPNITLGLPATATSTAASNVTSAQQEGGLQPALSLSPPFLSGGHLTPYLAEA
GAGTGGHGAHSPLLQHMVLMEQSPAQSPLVTGVSGLSMSPAASMAKLQRQHRPLGRTQSA
PLPQGSAAQAHAQALALQQLVVQQQHQQFLEKHKQQFQQQQQLHLNKMMTKPGESPGGRQ
HQSHPEETEEELREHQDGGALPPGVTIKQEPPDPQELQEEALQQHRERQAEQELLFRQQA
LLLEQQRIHQLRNYQASMEAAGLSLSFPAHRPLSRAQSSPASASSFPISVPPPDPSAKPR
FTTGLVYDSLMQKHQCMCGNTNSHPEHAGRIQSIWSRLQETGLRAQCECIRGRKASLEEL
QTVHSEAHVLLYGTNPLRQKLDCSVTPMFVRLPCGGLGVDSDTIWNEVHSSSAARLAVGS
VVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLSVNKILIV
DWDVHHGNGTQQAFYDDPNVLYLSIHRYDDGNFFPGSGAPDEVGSGPGVGFNVNVAFTGG
LDPPMGDVEYLAAFRSVVMPIANEFAPDIVLVSSGFDAVEGHPPPLSGYTLTSKCFGYLT
RQLMTLAGSRVVLALEGGHDLTAICDASEACVAALLGQELDPLPKAVLEQRPNPNAVRSL
EKVLETHSKYWGSLHRCSPLLGLSLLEAKRGDSEEAEAVSAMASLSVANCNAMDQRPEEE
PMEEEEPL
NT seq 3267 nt   +upstreamnt  +downstreamnt
atggtggacatcaactcggcgcttcccctgcgtctccctccagccgccatccccatggac
ctgcgcgtggaccagcaccatcagcaccaccagcagcaccaccagcagcagcagcagcag
gtgtcctcgctctccccgcccggtcagcagtcgcccgggccgggtttggtgggggccgcg
tgccaggcgggcgggggcgtgcgcgagcagcagctgcagcaggagctgctgaccctgaag
cagaagcagcagatccagcggcagatcctcatcgccgagttccagcggcagcacgagcag
ctgtcccggcagcacgaggtgcagctgcaggagcacatcaaggtacctcccgcacgttcc
ctttctatggccgtccgcctcctccacggctcagtgcaacaacaagagctcctggcactg
aagcaccagcaggagctgctggagcaccagaggaagatggagaaccaccgtctggagcag
gagctggagaaacagcagagggagcagaagctgctcctgttgaagaacaaggagcggggc
caggagagtgccgtggcgagcaccgaggtgaagatgcggctccaggagtttgtcctgaac
aagaagaaggccctggcccagcgcagcctcaaccagggggggctccacaacgacgccccc
tactggtaccgcaaaacccagcacagctctctggaccagagctcgccaccacagaccggc
gtgtccacctacaaccaccccgtgctcggtgtctacaacccccgggacgacttccccctg
cggaagactgcctcggagcccaacctgaagctgcgctcgcggctcaagcagaaggtgagc
gagcggaggagcagtccgctgctgcggcgccgagacagccccatcacctccgccaagaag
cgctcgctcgacatggcggactcggcgtgcagcagcgcccccggctcgggccccagttcc
ccgaataacagctccaacaacatccccaatgagaacggcatcaccgcgtcagtcgccaac
aacacggaggcgtctctggcccagaggctgtgcggcgccgagcggggctccgtgaaccag
ctgtccctctacacttcgccgtccttgcccaacatcaccctggggctgcccgccacggcc
acgtccaccgccgcgtcaaacgtgacctcggcacagcaggagggaggtctgcagccggcc
ctctccctcagccctcccttcctctccggcggccacttgaccccttacctggccgaggcc
ggagcgggaacgggcgggcacggcgcccacagtccgctgctccaacacatggtgctcatg
gagcagagcccagcacagagccccctggtgacaggtgtgagcggcctgtccatgtcgccg
gcggcgtccatggccaagctgcagcggcagcaccggcccctggggcggacccagtcggcc
ccgctgccccaggggagcgccgcgcaggctcacgcccaggccctggccctgcagcagctg
gtggtgcagcagcagcaccagcagttcctggagaagcacaagcagcagttccagcagcag
cagcagctccacctcaacaagatgatgaccaagcccggcgagtcgcccgggggccgccag
caccagagccacccggaggagacggaggaggagctgagggagcaccaggacgggggagct
ctgccgccgggggtcaccatcaagcaggagccccccgacccgcaggagctgcaggaggag
gcgctgcagcagcacagggagcggcaggcggagcaggagctgctcttcagacagcaggcg
ttgttgttggagcagcagcggattcatcagctgaggaactatcaggcctccatggaggca
gccggcctgtccctctccttcccggcacaccgccccctgtccagggcccaatcgtctccg
gcctcagcctcctctttccccatcagcgtcccgccccccgatccgtccgccaaaccccgc
ttcaccacaggcctggtgtacgactcgctcatgcagaagcaccagtgcatgtgtggaaac
accaacagccacccggagcacgccggacgcatccagagcatctggtctcggctgcaggag
acgggactcagagcgcagtgtgagtgtatccgtgggaggaaggcttctctggaggagctg
cagacggttcactctgaagcccacgtcctgctgtacgggaccaaccctctccgacagaaa
ctggattgttcagtcacccccatgttcgtgcgtctgccgtgtggagggttgggggtggac
agcgacaccatctggaacgaggtccactcctccagcgccgctcgactcgccgtcggctcg
gtggtggagctggttttcaaggtggccaccggggagctgaagaacggtttcgctgtggtc
cgccctccgggacaccacgccgaggagagcacccccatgggcttctgctactttaactcg
gtggccatcgcggccaagctgctgcagcagcgactcagcgtcaacaagatcctcatcgtg
gactgggacgttcaccacggcaacggcacccagcaggccttctacgatgaccccaatgtc
ctttacctgtccatccatcgctacgacgacggcaacttcttccccgggagcggagcgcca
gacgaggtgggcagcgggcctggagtcgggttcaacgtcaacgtcgccttcactggaggc
ctcgatccacccatgggagacgtggagtacctggcagccttcaggtcagtggtgatgccc
atagccaacgagtttgccccggacatcgtgctggtctcctccggctttgacgccgttgag
ggacaccctcccccgctgagcggctacactttgacgtccaaatgtttcggctatctgacc
aggcagctgatgaccctcgcggggagccgggtggtcctggctctggaggggggtcacgac
ctcaccgccatctgcgacgcctccgaggcctgcgtggccgccctgctgggccaggagctg
gacccgctgccgaaggccgtcctggagcagaggcccaaccccaacgctgtccgctctctg
gagaaagttttagagactcacagtaagtactggggctcgttgcaccgctgctccccgctg
ctgggactctctttgctggaggccaagcgaggagactcggaggaggcggaggccgtcagc
gccatggcctctctgtctgtggccaactgcaacgccatggatcagaggccggaggaggaa
cccatggaggaggaggaaccactgtaa

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