Gasterosteus aculeatus (three-spined stickleback): 120816513
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Entry
120816513 CDS
T07457
Symbol
ubtfl
Name
(RefSeq) upstream binding transcription factor, like isoform X1
KO
K09273
upstream-binding transcription factor
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120816513 (ubtfl)
03021 Transcription machinery [BR:
gat03021
]
120816513 (ubtfl)
Transcription factors [BR:
gat03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
120816513 (ubtfl)
Transcription machinery [BR:
gat03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
120816513 (ubtfl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_5
HMG_box_2
DUF4473
Motif
Other DBs
NCBI-GeneID:
120816513
NCBI-ProteinID:
XP_040028103
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All DBs
Position
III:17560665..17570369
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AA seq
706 aa
AA seq
DB search
MMNGSGSVSAAQSSRIKNEPDDWTKEDCLTLLEKIHSLLPDTDSMKYKTTESHFDWGKVC
FGSFSGEMCRQKWLRVSSEVRKYRTMTELIVDAMESVKNPYKGKKLKTHPDFPKKPLTPY
FRFFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPDKKKQKYITEFQREKEEFEKNMARF
KEEHPELMEERKKSDLPEKPKTPQQLWHNHEKKTYLKLHPEVSQKELKEALRRQWSQLSD
KRRLKWISKALELQKDYEGSMRAYHVAHPDVTSDDHVRSVLTKAERQLKDKFDGRPTKPP
PNGYSLYCAELMVNMKDVPCTERMVLCSKQWRMMTQKEKDMFQKRCEQRKKQYDVDLQRF
LESLPDEERNRVMGEEKLGGARAGGGVSASPHRAKSPAKVVSPLLSQERGREAEPETWTP
GEQTKDRRDGKKTGKLPETPKTAEEMWQHSVMGDYLAKYRSDRRKAQAAIEAAWKSMEKK
EKIPWIKKAAEDQKRYEVQYQPARELLETRTPPAAQRKPKFNGEPKKPPVSGYQMFSQEL
LTNGELNHFSLKERMVEIGKRWHKLSQTQKDKYKKMVEEQQGEYKAELEDWVKSLSPQDR
AVYKEFSSSKRRSTTKVRSSPLAKVCVTAKGKAAGTRAATQPVGVTKRAMAYRAKQDTSD
STGKSESSDSDDDDETSGSSDSDDENDDDDDEDRSSSDESSDSDSD
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatggcagcggcagcgtctcggcggctcagagctccaggatcaaaaacgaacca
gatgattggacaaaggaggactgtctgactcttctggagaagattcactccctgctgccg
gacacagacagcatgaagtataaaaccacagagtcacactttgattgggggaaagtttgt
ttcggcagcttcagcggagaaatgtgtcggcagaaatggctgagagtttcatctgaggtc
cgtaagtacagaacgatgaccgagcttatcgtagacgccatggagtcggtcaagaatccg
tacaaaggaaaaaagctgaagactcatccagatttccccaaaaaaccgctgactccgtac
tttcgcttcttcatggagaaacgagccaaatacgccaaaatccacccggagatgagcaac
ctggacctgaccaagatcctgtccaagaagtacaaggagctgcccgacaagaagaagcaa
aagtacatcacagagttccaacgggagaaagaagagtttgagaagaacatggctcgattc
aaagaggaacatccggagctgatggaggaaaggaagaagtccgatctgccggagaaaccc
aaaactcctcaacagctgtggcacaaccacgagaagaagacctatctgaagctgcacccg
gaggtgagtcagaaggagctcaaggaggctctgaggagacagtggtcccaactgtctgac
aagaggagactcaagtggatcagcaaggctctggagcttcagaaggattacgagggcagt
atgagagcgtatcacgtcgctcacccagatgtgacctctgatgatcacgtccggtccgtc
ctaactaaagcagagagacagctgaaggacaaatttgatggacggccaacaaaacctcca
ccgaacggctactcgctgtactgtgccgagctgatggtgaacatgaaggacgtcccctgc
acggagcgcatggtgctctgcagcaaacagtggaggatgatgacacagaaggagaaggac
atgttccagaagcgctgtgagcagagaaagaagcagtacgacgtggacctgcagaggttt
ctggagagtcttccagacgaggagcgaaacagagtcatgggcgaggaaaaattgggagga
gccagagcgggagggggcgtgtccgccagcccacacagagccaagtctccggccaaggtg
gtgtctcccctcttatcgcaggagcgtggtcgggaggcggagccagagacatggacaccg
ggtgaacagacgaaggacagacgggacgggaagaagaccgggaagcttcctgagacaccg
aaaaccgccgaggagatgtggcagcacagcgtgatgggcgactacctggctaagtacaga
agcgaccgcaggaaggcgcaggcggccattgaggccgcctggaagtcgatggaaaagaag
gaaaagattccttggatcaagaaggcagcggaggaccagaagcgttacgaggttcagtac
caacctgcgagggagctgttggagacgaggactccacctgcagctcagaggaaaccaaag
ttcaatggagaaccgaagaagcctcctgtgagcggctatcagatgttctcccaggagctg
ctgaccaacggcgagctgaaccacttcagcctgaaggagcggatggtggagatcggcaag
aggtggcacaagctgagccagactcagaaagacaagtacaagaagatggtggaggagcag
cagggggagtacaaggccgagctggaggactgggtcaagtctctgtctcctcaggaccga
gccgtctataaggagttctcctcctcgaagcgtcgcagcaccactaaagttcgcagcagt
ccgctcgctaaagtctgcgtgacggcgaagggaaaggccgccggtacaagagccgcaacg
cagccggtcggggtcaccaagagagccatggcgtaccgcgccaagcaggacacgtccgac
tcaacggggaagagtgagtcgtcggactctgatgacgacgatgagacgtcaggaagctca
gacagcgacgacgagaacgatgatgatgatgatgaagatcggagctcctcagacgaatcc
agtgactcagactctgactag
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