Gasterosteus aculeatus (three-spined stickleback): 120817344
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Entry
120817344 CDS
T07457
Symbol
bcorl1
Name
(RefSeq) LOW QUALITY PROTEIN: BCL-6 corepressor-like protein 1
KO
K26199
BCL-6 corepressor-like protein 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120817344 (bcorl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gat03036
]
120817344 (bcorl1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gat03037
]
120817344 (bcorl1)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
120817344 (bcorl1)
Cilium and associated proteins [BR:
gat03037
]
Motile cilia and associated proteins
Sperm associated proteins
120817344 (bcorl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUFD
Ank
Ank_2
Ank_4
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
120817344
NCBI-ProteinID:
XP_040029410
LinkDB
All DBs
Position
IV:6385178..6403275
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AA seq
1519 aa
AA seq
DB search
MQVDLTLMNVGDGGTVSRQISAPIKASASMVGNPPQTLPSEFRGDVTLSQQNKSTPTTDC
KTAKACLDTSNYNHSPELSPPLQPNNAPTSGSEKRADKRAEAPKPKSDGAAVLPAVLSAP
QWSSGEDLLSLGRGAPTASKKSHPPTQSAQSAPPGFQCSTKFKPAQPVAFLPSTNFPSPL
CKITLPPALSQISAFRDATAGQFQKEIPPQSSCVGGTPLVRTYPYPFSVGRTPAAEKRAG
ASKLKSNHSSNKHSKSVGEHKSLASVVASPAVALPLQQPSLTPAAPSRYTLSPTAAICCG
SALAGVTSQSRLLNHAEKSSSLDKTTVGSPKTTPASASDDTAACPVEPRDVPLDLSAKSK
RPKCIDDPLVATIEPHNSEPNQKDFLNAKRAHSTTYSPAAQYPVLPNTHRNGSHQKQSNR
PQNHQVQEPKPAWGKGASQDSIKNIPGTYVGVASPILASTLRGKDGKGTFVDEYQSFAKQ
EFISIIDQGEHLASGGKKPSCMTKGHQHAHSVKHVKNTSVAITKDCPAKGALTTALSSSA
RAQAHQKSGAGKTAVPYSPAVVGAAWQQPPSVLHPASPPQRKIPQGSPQAKGASATERCK
ARSPHRRPSSPEEDKRERMKCPLSNLASIVKQQALDGTAGEGETRAAPVASRKADFPNPL
SPSQDVRAKQTSALEYPAYWSLEKWAALPSQADSTPAKKKHEKASEPAESNAELNSGRGE
MVGVPAKLGFPKPAGRLFGKAPTNGNRLESKLAQVLEGEVLKREVWPPDGPPCDKPDGAV
ASILTGPCAAGGDKFEQKTNGTKEELPTKTAGVRHKKSSPKKPAKEKSPSDWSKKAAGKK
KQDIEKTPPKXSCQKKQKKQCAPVQEQSPSSGNLSPPGKGPTARDKPSPNKVEQAARDRS
VPDSGGGAPDAPRPLGGSAVLAKEADATGSFTPRLRRGRRRADEARLDLWGFATPSPPPP
QMPPPPVSPSPSAVPAQPARRPRGRPRSTPLPERAAQGKGKAAGAEGEAPAPKKRRRCRS
KKYQTGDYVTEKDKLEDAERRGEVGSLRRDSGVPADPQARQCSSPTACSPEPPARRPSFT
RSGSLRYQESEVSPESNDKPSGKRKFKSKHLSDSEEQKTKTKRSGLGKRGASLALDNEGA
DVKRTESLPPAPKGSPSSPPSKKASTGRTGGPESPAKRPVPPEVRRLIVNKNAGETLLQR
AARLGYQDVVQYCLEKDVGEVNRRDNAGYTALHEASSRGWTQIVQMLLKHAADVNCSAQD
GTRPLHDAVASDNLPIVWLLLNHGADPTLATYSGHTPVKLAHSPSMKAFLTEYFTDLEAR
KEQDLGSPWDFYGSSLFETDQEPCWDFLLSEQNQELQEDATGKTEPDSDKDCLLFEFSSE
PLLPCYHVQVSLTQGFCNWFLLTDVLKRLKMSARIFRARYPHLEVVSLSRVELSRQASIS
QVSSTLASLYKDQNKEEEEEEEEEEEEEAAGIVELVRCVPELQRLLGSSIDILQDDDDEE
EEEEAEEETLARAGKPRGR
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtggatcttacactaatgaatgtaggggatggaggcacggtgagcagacagatc
agtgctccaattaaagcgtctgctagtatggtgggaaatcccccccagacgctaccctct
gagttcagaggagatgttaccctcagtcagcaaaacaagagcacaccaacaacagactgt
aagaccgcgaaagcctgcctggacactagcaattacaaccacagccccgagctgtctcca
cctctgcagcccaacaatgcaccgacgtccggctcagagaagagagcggacaaaagggcc
gaggcccctaaacccaagtcggacggcgccgccgtcctccccgccgtcctctccgctccc
cagtggtcgagtggagaggacttgctcagcctcggtcgcggcgcgccgacagccagcaag
aaatcacacccgccgacgcaatctgcgcaaagtgcaccgcccgggtttcagtgctccacc
aagttcaaaccagcccagccggttgccttccttccgtccacaaatttcccctctccgctc
tgtaaaatcactcttccaccagcattgagtcagatttcagcatttagagacgccacagcg
ggtcagttccagaaagagattcctccccagagctcatgtgtcggagggacacctctcgtg
cggacgtatccctaccccttctcggtgggcaggactccggctgcggagaaaagagccggc
gcgtcgaagctcaaatccaaccattcgtctaataagcattctaaatccgtgggcgagcat
aaatctttagcgtcagtggtggcctcaccggctgttgccctaccgttgcagcagccttca
ttaactcccgcagcaccctcccgctacacgctgtctcccaccgctgccatttgctgtggc
tccgcactcgccggcgtcacctctcagagcaggctgctgaaccacgcggagaaaagcagc
agcctagacaagaccaccgtgggctctcctaaaacgacccccgcctctgcttcagacgac
actgcggcgtgtcccgtcgagccgagagacgtgcctctcgatttatctgctaaatccaaa
cgtccgaagtgcatcgacgaccctctagttgcaacgatcgagcctcataatagtgagccg
aatcagaaagattttctgaacgcaaagcgggctcattccacgacgtatagcccggctgca
caataccccgtcctaccgaacacccacagaaatggatcccatcaaaagcagtcaaatcgg
cctcagaatcaccaggtccaagagcccaaaccagcgtggggtaagggagcttctcaagac
tccataaaaaacatccctggaacatatgttggcgtggccagcccaatactggcttctact
ctgcggggcaaggacggaaaagggacttttgtagatgaatatcagagtttcgccaagcag
gagtttatatctataatcgaccaaggggagcacctggcatccggaggaaagaagccatcc
tgtatgacgaagggccaccaacacgctcacagtgtcaagcatgtaaaaaacaccagcgta
gccataactaaggactgtcccgctaaaggagccctgactaccgccctgtcgagctctgcc
agggctcaggcccatcagaaatccggcgctggcaaaacggcagtgccgtactctcccgct
gtcgtcggtgcagcctggcagcagcctccgagtgtgctgcacccggcctcgccccctcag
aggaagatcccacaaggatctccgcaggcgaagggtgcctccgccacggaaagatgtaag
gcccgaagtccccaccgccgcccgtccagccccgaggaagataagcgggagaggatgaag
tgtcccctgtccaacctcgcgtccatcgtaaagcagcaagcgctcgacgggacggcgggc
gagggcgagacccgggcggcgcccgttgcctcgagaaaggccgattttccgaacccgctc
tctccgagccaagacgtacgagccaaacaaacttcagctctcgagtacccggcctactgg
tctttggaaaaatgggctgctttgccttctcaagcggattcaactccagctaagaagaag
cacgagaaggcgagcgagcccgcggagagcaacgcagagctgaactccggccggggggaa
atggtgggagtaccggcgaagctgggcttcccaaagcccgctggccgtctctttggcaaa
gcacccacgaatggcaacaggctggagagcaaactagcccaggtgttggagggggaggtg
ttgaagcgggaagtctggccgcccgacgggcctccgtgcgacaagcctgacggcgcggtc
gcgtccatcctgaccggcccgtgcgcggcgggaggcgacaagtttgagcagaaaaccaac
ggaaccaaagaggagttgccaaccaaaaccgctggcgtcagacataagaagagcagtccg
aagaagccggcgaaggagaagtcgccatcggactggtccaagaaggctgcgggaaagaaa
aagcaagacatagaaaaaactccaccaaagnggtcttgtcaaaagaagcagaagaaacaa
tgtgcaccggttcaggagcagagtccatcatcggggaatctttctccaccgggcaaaggg
ccgacggcgagggacaagcccagtcccaacaaggtggagcaagcagcccgcgacagatct
gtcccagatagcggcggcggcgctccggatgctcccaggcccctcggcggctccgctgtg
ctcgccaaagaggccgacgccacggggagcttcaccccgagactgaggcgagggcggcgg
cgcgccgacgaggcccggctcgacctgtggggcttcgcgacgccctcccctccgccaccg
caaatgccgcctcccccggtgtccccgtcaccctccgcggttcccgcccaacccgcccgc
cggccgagggggaggccccgctcgacccctctgccggagcgagcggctcaggggaagggc
aaggcggccggcgcagagggcgaagcgcccgctcctaagaaacgccggcggtgccgtagc
aaaaagtaccagacgggggattacgtcaccgagaaagacaagctggaagacgcagagcgc
cgcggagaggtcggctccctgagacgggacagcggagtcccagcagatccacaggcgcgt
cagtgttcgagtcccactgcctgcagtccagagccgcctgcccggagaccctcgttcact
cgctccgggtcgctccgctaccaggagagcgaggtgtccccggagagcaatgacaagcct
tcggggaaaaggaagttcaaaagcaagcacttaagtgacagcgaggagcagaagacgaag
accaaacgcagcggcttgggcaagcgaggtgcctccctcgccctggataacgagggggct
gatgtaaaaaggacagagagcctcccgcccgctccaaaaggctcgccatcatctccaccc
agcaagaaagcctcaacggggagaactggcggcccggagtctcccgccaaaaggcccgtt
cctccggaggtccggcggctgatcgtcaacaaaaatgccggggagaccctgctgcagcgc
gcggcgcgcctgggctatcaggacgtcgtccagtactgtctggaaaaggacgtcggcgag
gtcaaccggcgcgataacgccggctacacggcgctgcacgaggcgtcctcccgaggctgg
actcagatcgtccagatgctgctgaagcacgccgccgacgtcaactgcagcgcccaagat
gggacacggccccttcacgacgcggtggcgagcgataacctgccgatcgtctggttgctc
ctgaaccacggcgccgacccgacgctggccacctactccgggcacactccggtcaagctg
gcgcacagcccgagcatgaaggccttcctcacagaatatttcacagacctggaagcccgc
aaagaacaagatctgggctccccctgggatttctacggtagctccctctttgagacggac
caggagccgtgctgggacttcctgctgtcggagcagaaccaggagctgcaggaggatgca
acgggaaagaccgagccggactcggacaaagattgtctcctgttcgagttctcctcggag
cctctcttaccctgctatcatgttcaggtgtcgttaacccagggcttttgcaactggttc
ctcctgacggacgtccttaagcgcctgaagatgtcggcgcggatcttccgtgcgcgttac
ccacacttggaggtggtgagtctgtcgcgcgttgagctctcgaggcaggcgtcaatcagc
caggtgagctccacgttggcatccctgtacaaagatcaaaataaggaggaggaggaggaa
gaggaagaagaagaggaggaggaggcggcaggaattgtggaactggtgcgatgtgtaccg
gagctccagagactactgggatcctccattgacatcctgcaagatgatgatgatgaggag
gaggaggaggaggcggaggaggagacactggcgagggcggggaagccgcgcggccggtag
DBGET
integrated database retrieval system
