Gasterosteus aculeatus (three-spined stickleback): 120819179
Help
Entry
120819179 CDS
T07457
Name
(RefSeq) LOW QUALITY PROTEIN: thrombospondin-2-like
KO
K04659
thrombospondin 2/3/4/5
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04145
Phagosome
gat04510
Focal adhesion
gat04512
ECM-receptor interaction
gat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120819179
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120819179
09144 Cellular community - eukaryotes
04510 Focal adhesion
120819179
09142 Cell motility
04820 Cytoskeleton in muscle cells
120819179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120819179
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gat04147
]
120819179
00536 Glycosaminoglycan binding proteins [BR:
gat00536
]
120819179
Membrane trafficking [BR:
gat04131
]
Endocytosis
Phagocytosis
Opsonins
120819179
Exosome [BR:
gat04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120819179
Exosomal proteins of colorectal cancer cells
120819179
Exosomal proteins of bladder cancer cells
120819179
Glycosaminoglycan binding proteins [BR:
gat00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120819179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
EGF_3
TSP1_ADAMTS
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
120819179
NCBI-ProteinID:
XP_040032278
LinkDB
All DBs
Position
V:9126713..9136834
Genome browser
AA seq
1097 aa
AA seq
DB search
MSPLRGFPCFLILLSAADVCGVVGGAKVDNVSSEVCHHPCEELVDLLTEIQGLRIVTGNL
LEDLDRVSKENEEMRTSLSELDNNSSNNNKNRSHNRSSINGNVSSSRGSTGSNNGSSNGN
DNGNSSNSGDSSGNGNGSGNGNGSGNGSGSSNGSGGSNDSSSSGNGNGSGNGSGSSNDSG
GSNGSSSNGNGNGSGNGNGSGNGSGSSNGSSGSNGSGGSNGSSSGSGNGSGNGNGPGSSS
DVNDVDRDREVWCMQDGRVYEHGEDWEVDSCTWCACQDGKVVCQQVACPPVACIYPSFID
GECCPLCRDNENGWSPWSEWTHCSVTCGRGGQQRGRSCNGIKPACAGPSVQTRSCMPLKC
DRKAQSDGNWGLWSPWSACTTTCGDGRIARLRLCSNPPPQKGGRGCVGGARETQICNNTL
CPVAGGWTGWTEWSLCSESCGGGLKSRQRECLSPAPQHGGKPCAGDAVDYEACNKQPCPI
DTCLISNPCFPGVECTSLSDGSWECGSCPLGLHGNGTHCEDENECEVESVCVTQCVNTDP
GFHCLPCPPRYKGTEPYGLGLKEARKTRQVCEPYNPCKDNTHTCHRYAQCVYLGLASEVL
FRCVCAVGFAGDGFLCGEDSDLDGWPNARLTCKQNATYHCQKDNCPTLPNSGQEDLDKDG
QGDACDPDDDNDDVIDERDNCPLVYNPRQFDSDRDGVGDVCDNCPFDSNPLQADTDDNGE
GDACSIDIDGDEVLNDRDNCPSVYNTDQRDTDLDGVGDQCDNCPLLHNPLQLDSDSDLVG
DMCDDNEDIDEDGHQNSLDSCPYIANSNQADHDKDGKGDVCDHDDDNDGIPDDRDNCRLV
PNRDQLDSDGDGIGDACFDDFDNDSIPDALDPCPLNQDIGSTDFRKFQVVLLDPKGTTQS
DPLWVIRSQGTELVQTANSDPGIALGYDKFNALDFSVTFYVNTNRDDDYAGIVFAYQSSR
RFYVVMWKQVSQAYWEKKPFKAFATAGVSIKLVNSTTGPGEYLRNALWHTGNTKHQVRTL
WHDPNEIGWKDYTAYRMHLIHRPKTGFIRVVVYEGRGILSDSGAVYDHTLAGGRLGLFVF
SQEHVLFSDLRYECRDN
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgagtccactgagaggtttcccctgttttttgatacttctgtctgcggcagatgtttgc
ggagttgtgggtggcgcaaaagttgacaatgtatcgtccgaagtctgtcatcatccgtgt
gaggagctggtggacttactcactgagatccaaggcctgcgcattgtgaccggcaacctg
cttgaagacctggacagagtatcaaaagaaaacgaagagatgcggacatctttgtcggag
ctggacaataatagcagcaacaacaataaaaacaggtcgcacaacaggagcagcatcaac
ggcaacgtcagcagcagccgcggcagcaccggcagcaacaatggcagcagcaatggcaac
gacaatggaaacagcagcaatagtggcgacagcagcgggaatggaaacggtagcggcaat
ggaaacggcagcggcaatggcagcggtagcagcaacggcagtggtggcagcaacgacagc
agcagcagcgggaatggaaacggtagcggcaatggcagcggtagcagcaacgacagtggt
ggcagcaacggcagcagcagcaacgggaatggaaacggtagcggcaatggaaacggcagc
ggcaatggcagcggtagcagcaacggcagtagtggcagcaacggcagtggtggcagcaac
ggcagcagcagcggcagcggcaacggcagcggcaatggcaacggtcctggtagcagctcg
gatgtcaatgatgttgacagagacagagaggtctggtgcatgcaggatggacgggtgtac
gagcacggggaggactgggaggttgacagctgcacctggtgtgcttgccaggacggaaag
gtggtctgtcagcaggtggcttgtcctcctgtagcctgcatctatccatccttcatcgat
ggagagtgctgtcctctctgccgtgacaatgagaacgggtggtccccgtggtctgagtgg
acccactgttcagtcacctgtggacgcggaggtcagcagaggggccgatcctgcaacggc
atcaagccagcctgtgctggcccgtcggtccaaacccgcagctgcatgccgctgaagtgt
gaccgcaaggcgcaatctgacgggaactggggcctttggtctccttggtccgcgtgcaca
accacatgtggtgatggcagaatcgcacggcttcgtctctgcagcaaccctccaccacag
aaggggggcagagggtgcgtgggcggcgccagggagactcagatatgcaacaacacactg
tgccccgtcgcaggcggctggaccggctggaccgagtggtcactgtgctcggagtcctgt
ggcggaggtcttaagagtcgacagcgggagtgtttgagccccgcccctcagcacggtgga
aagccttgtgccggagatgctgtggactatgaagcatgtaacaaacaaccatgtcccata
gacacatgtttgatctcaaatccatgttttcctggagtggagtgcacatccctcagcgac
ggatcatgggagtgtggaagttgcccgttgggattacatggaaacggcactcactgtgaa
gatgagaatgagtgtgaagtggagagtgtgtgtgtcacacagtgtgtaaacacagacccc
ggcttccactgtctcccctgtcctcctcgctacaaaggcaccgagccgtatggtctcgga
ctgaaagaggcccggaaaaccaggcaggtgtgcgagccatacaatccttgcaaagacaac
acacacacctgccacaggtatgctcagtgtgtatacctgggtctggcgtcagaggttctc
ttcaggtgcgtgtgcgctgtcgggttcgccggcgacggcttcctgtgtggcgaagactct
gatctggacggctggcccaacgccagattaacctgcaagcagaatgcaacctatcactgt
caaaaggacaactgccccacgctaccaaactcgggacaggaggacctggacaaggacgga
caaggggacgcctgtgaccctgacgacgacaacgacgacgtcatagatgagagagacaat
tgcccgctggtgtacaaccctcggcagtttgactccgacagagacggggtcggggacgtc
tgcgataactgtccgtttgatagcaacccgctgcaggcagacacggacgacaatggcgag
ggagacgcctgcagcatcgatattgacggagatgaggttctgaatgaccgggataactgt
ccctcagtctacaacaccgaccagagggacacagacttggatggtgttggagaccagtgt
gacaactgtccccttctgcacaacccgcttcagctcgactctgacagtgacttggtgggg
gacatgtgtgacgacaacgaggacattgatgaggacgggcaccaaaattccctggacagt
tgtccctacatcgccaatagcaaccaggccgaccacgacaaggacgggaaaggagacgtc
tgtgaccacgacgacgataacgacggtatcccagacgaccgggacaactgcagactggtg
cctaacagggaccagctggactctgatggtgatgggattggagatgcatgctttgacgat
tttgacaatgacagtattccagatgcactggatccatgtccactgaaccaggatatcggc
tccacggacttcaggaagttccaggttgttttgttggaccctaaaggcaccacgcagtca
gaccctctgtgggtgatccgcagccaaggcaccgagctggtgcagacggccaactccgac
cccggcatcgccttggggtatgacaagttcaacgcactggacttcagtgtgacgttttat
gtgaataccaaccgagatgacgactacgcaggcattgtgttcgcctaccagtccagtcgg
cgcttctatgtcgtcatgtggaaacaggtgtctcaggcctactgggagaaaaagcccttc
aaagctttcgccacagcgggtgtctcgattaaactcgtcaactctaccacgggacctggg
gagtatctgcgcaacgccctgtggcacacggggaacaccaaacaccaggtcagaactttg
tggcacgatcccaatgaaattggctggaaggactacaccgcgtaccgcatgcacctcatc
cacagacccaagactggcttcatcagggtggtggtgtacgagggcagagggattctatcc
gactcgggggccgtgtacgaccacacgctggctggaggccgactggggctctttgtcttc
tctcaggaacacgtcctcttctcggacctcagatatgagtgcagagataactga
DBGET
integrated database retrieval system
