Gasterosteus aculeatus (three-spined stickleback): 120819738
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Entry
120819738 CDS
T07457
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120819738 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120819738 (exosc5)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120819738 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
120819738
NCBI-ProteinID:
XP_040033392
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All DBs
Position
I:complement(17189438..17192656)
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AA seq
219 aa
AA seq
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MEVCGSPAVTLREFGCEQSLLSRPDGSASFIQGDTSVLAAAYGPAEVKVSKEIYDRATLD
VLIQPKVGLPSVRERAQEQCVRETCEASLLLSLHPRSSLTLILQLIHDDGSILSCFLNAA
CMALMDAGLPMSFLFCGVTCAIDVDGQIITDPTAAQEKESRAVMTFAIDSKEHKVMMSST
KGSFSVNELQQCVAVSQKASEKIFQFYRDSVKRRYSKIL
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgtgcggctctcccgctgttactctgagagagtttggttgtgagcagagttta
ctgtctcgacccgacggttcagcttccttcatccaaggagacacgagtgtcctggccgca
gcttatggaccagccgaggtcaaggtcagcaaggaaatctatgatcgggcaacactggat
gtgttgatacagcccaaagtggggctgccaagtgtaagggagcgagcacaagagcagtgt
gtgcgagaaacctgcgaggcatctctgctcttgtcacttcatcctcgctcctccctcact
ctcattcttcagctgatacatgatgatggttcgatcttgtcctgctttttgaatgctgcc
tgcatggctcttatggatgccggcctgccgatgagtttcttgttctgtggcgtaacttgt
gccatagacgtagacgggcaaatcatcacagaccccactgcggcgcaggaaaaggaaagt
cgtgctgtgatgaccttcgctattgacagcaaagaacacaaagttatgatgtcgtccacc
aaagggtcgttttcggtgaacgagctgcagcagtgtgttgcagtcagtcagaaagcatca
gagaagatcttccagttctacagagactctgtcaagcgcagatactccaaaatcctctga
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