Gasterosteus aculeatus (three-spined stickleback): 120824939
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Entry
120824939 CDS
T07457
Symbol
ccdc40
Name
(RefSeq) coiled-coil domain-containing protein 40 isoform X1
KO
K23730
coiled-coil domain-containing protein 40
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gat03037
]
120824939 (ccdc40)
04990 Domain-containing proteins not elsewhere classified [BR:
gat04990
]
120824939 (ccdc40)
Cilium and associated proteins [BR:
gat03037
]
Motile cilia and associated proteins
96 nano-molecular ruler
120824939 (ccdc40)
Domain-containing proteins not elsewhere classified [BR:
gat04990
]
Other domain-containing proteins
Others
120824939 (ccdc40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1
Motif
Other DBs
NCBI-GeneID:
120824939
NCBI-ProteinID:
XP_040042055
LinkDB
All DBs
Position
IX:11649878..11658795
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AA seq
1000 aa
AA seq
DB search
MFTVAKQRLYNGCSARRFVQDVYGGPMQSAGAEDGGDRAAEGREECGSLNEPGTDPDESP
QLHPDRGAADDSSPASTSTRELVQENAAQAPLTLHLSNLNMSDDMVDQRTLPEGEEEEEQ
DDNELIVLDPEHPLVRMQQAALSSLLSKQLERINLRLEEKLAIEKEDANHLQEIDVEMFR
VQKQLARLQTRLHDHHHTKAQAKAKHQQAQDQLKTMKGRCARTTSQNAKAKANVSQLQAE
MEDQMLHLTFTQRVSEDLRSNVKVLKNARSKARAEKNQAEDQKFKQDLYVERLTKDLEGL
TQQIGMYEVQTVAQAEETKAAREAHSEAEMEMESLVMARKQLLQQWSSSLVGMRRQDEAF
SAMQEAVRTVEPQVILLDREIEGYKRSIAEEQEQNATLTVQLNRSQMDGATSKKLISQMQ
AKQEALQAHYSTCVRTLRETESNLARLSEDLSGHHVEVNDQRKQLEKESDLRLELEDSII
TYIQQKPTHNMAAKYSKQLTASIATLRRQKLSQLRQLENKVAAVGLESSEVSQHLDSLTL
IQSALDEEVAKHNKLLTSYQTKSSSSGKLIDQKHAVIFECEEKIKEIAARTGSEDMSPLE
IKIEDLRAQIQELATNIKGDQQLWMKRQRTLVGLSQEIDANSKNMLKLQIEFTSKQELKM
CLESKIKVEHREEMELDKNVKILKRDLLKLNALLSKNGELSQELEQKHASMESDFLHRLK
EAEREAINLHVKHENTQEDKERLLKSLVEAERQIVLWEKKTQDMKEIRSVVDSKVVQGDI
QMMKAEIHRMEVRLNQLMKQQNRLVRESVATVERRETIVRRKESLEHSSHRQTTKDKSTL
ITQRQQRKIQATHKQVVKCEEEFRKLQKDQESLSNMLTQQKQLLSELCGTSYSLDSDIGN
LQDTKDRNFAHLVALQSRNKKLQGVCAGSYRAASTRESVGGALQSQMERVHAVSTILYKV
CEEFPQHHEALHRLSLTLEARAHLMPGDPPKGGGGGGKSM
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccgttgccaagcaacggttgtacaacggttgttcagcgcgccggttcgtccag
gacgtatacggtggtccaatgcagagcgctggagcggaggatggaggggaccgagcggcg
gagggccgcgaggagtgtggctcactgaatgagccaggaacggatccggatgagtccccc
cagcttcaccctgaccgcggtgctgcagatgactcctcacctgcgtccaccagtacaagg
gaactagtgcaggaaaacgcagctcaagctccgttaacgcttcacctctcaaacctgaac
atgtcagacgacatggtggatcagcggacgctgccagagggggaagaggaggaagagcag
gacgacaacgagttaattgttctcgaccctgaacatcccctggtcagaatgcaacaagct
gctctgagcagcctgctcagcaagcagctggaaaggatcaacctgagactcgaggagaag
ctggccatagagaaggaagatgccaaccacttacaggagatagatgttgagatgttcagg
gttcagaagcaactggccagactccagaccagactgcatgaccatcatcacaccaaggca
caggctaaagccaaacatcaacaggcacaagatcagctgaagacaatgaagggccggtgt
gccaggacaaccagccaaaacgccaaagccaaagccaatgtgtcccagttacaggcggag
atggaggaccagatgctgcatctcaccttcacacaaagagtcagcgaagatctgcgctca
aatgtcaaagtcttgaagaatgccagaagcaaagcaagagctgagaagaaccaggccgaa
gatcagaaatttaagcaggatttgtatgtggagcgtctgacgaaggacttggaggggctg
acccagcagataggcatgtacgaggtgcagaccgttgcccaagctgaggagacaaaggca
gcccgagaggctcactctgaggctgagatggaaatggagtccctggttatggcccgtaaa
cagctgttgcagcagtggagcagcagcctggtgggcatgaggagacaagatgaggccttc
agcgcgatgcaagaggccgtgcgcaccgtggagccccaggtgattttgctggacagagag
attgaaggttacaagagatccatcgccgaagagcaggagcagaatgcgacactaactgtg
cagctaaaccggtcccagatggacggggccacgtccaaaaagctgatcagtcagatgcag
gccaagcaagaggctctccaggcccactacagtacctgcgtccgcactctgagggagaca
gagagcaacctcgccaggctctccgaggacctcagcggccaccatgttgaagtaaatgat
cagaggaagcagttggagaaagagagtgatttgcgtctggagttggaggacagcatcatt
acctacatccagcagaagcccacccacaacatggcagccaagtactccaagcagctcacc
gccagtatagccaccctcaggagacagaagctctctcagttgcggcagttggagaataag
gttgcggcggtgggactcgagagcagcgaggtcagccaacatctggatagcctgaccctc
atccagagcgccctcgacgaggaggtcgcaaagcacaacaagttactgacatcctaccag
actaagtcgtcttcctctggtaaactcatcgatcagaagcacgctgtcatcttcgagtgt
gaggaaaagattaaagaaattgcagccagaaccgggagtgaagacatgagtcccttggaa
atcaagattgaagatttaagggctcagatccaggagctggcaacgaatatcaagggtgac
cagcagctctggatgaaacggcagaggactctagtgggactgagccaggagatagacgcc
aacagcaagaacatgctcaaactgcagatcgagttcacttccaagcaggagttgaaaatg
tgcttggaaagtaagattaaagtagagcaccgtgaggagatggagctggataagaatgtg
aagatactgaaacgagacctgctgaagctcaacgccctgctgagcaagaacggagagctc
agccaggagctggagcagaagcacgcgtcgatggagtctgacttcctccacagactaaag
gaggcagagcgagaggccatcaacctgcatgtgaaacacgagaacacccaggaggataaa
gagagactcctcaaaagtcttgtggaggctgagcggcagatcgtgctgtgggagaagaag
acccaggatatgaaggagattcgttcagtcgtggactctaaggtggtccagggagacatt
cagatgatgaaggctgagatacaccgtatggaggtgcgactcaaccagctgatgaagcag
cagaatcgactggtgagagagagtgtagcaaccgtagagcgcagggagaccatcgtccgg
cgcaaagagtccctcgagcacagctcccacagacaaactaccaaggacaagtcaaccctc
atcacacagcgccagcagcgcaagatccaggccacacacaagcaagttgtaaagtgtgag
gaggagttcaggaagctgcagaaggaccaggagagtctgagcaacatgctcacacagcag
aagcagctgctgtcagagctctgtggtaccagttacagcctggattctgacattggaaat
ctccaggacactaaagacaggaactttgcccacctagtggctctacagagccgcaacaag
aagcttcagggcgtgtgcgcgggcagctacagagccgcgtctaccagggaatcggttggc
ggcgctctgcagagccagatggagcgcgtgcacgctgtcagcaccatcttgtacaaagtg
tgcgaggagttcccccagcaccacgaggcgctgcacaggttgtcgttaacgctggaggcg
cgcgcacacctcatgccaggagaccccccgaagggaggaggtggggggggaaagagtatg
taa
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