Gasterosteus aculeatus (three-spined stickleback): 120826396
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Entry
120826396 CDS
T07457
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03013
Nucleocytoplasmic transport
gat03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120826396 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120826396 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120826396 (nup153)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120826396 (nup153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
zf-RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
120826396
NCBI-ProteinID:
XP_040044567
LinkDB
All DBs
Position
X:complement(10014372..10027822)
Genome browser
AA seq
1500 aa
AA seq
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MTAIRRRNADRHSDERAMAATGGGKIRSRRYHIASKPYAKNKQQPSGLISRVTDTVKSIV
PSWLQKYFKNEDAPEGAEDVLGTVHNCLPPPPPNGSEEAPPPLDGCDSPELSTSNMEPST
SRASLNFQDYVLSRPPLSRSHLHFPPLEASSPTLGASVSHFSQPSTSSAPGPFSTGFSLV
KEIKDNLSQHEDDNISTTSGFSSRASDKDVPTSKTASFPQLWSPEMERTHSGPQPAQSSL
RKPSFNLSVFGNSSNSSLNSTLLNTSQLGDSPFYPGKTMYGGAAAVRTSRGRPGTPYQAP
VRRQIKAKPAGAQPCGVTSATARRILQSLERMSSPLADARRIPAAAAASSPLSASMDGAN
LDVSQSKRKRMDSSLPPVQKLVVPVAALVSGNRSVSFRPTLTPGGVSRTLDRTPRETPKR
QSPQLPEATPGPSKSTMIPSGPVYPLSSTPAASSVSSGGGKMKRERTSTRPSSKRSEEDE
VAEVLDLPAISLPISTSALPSFSFSPLPPLATTNSAAPNLTPVTPAKEEVTNKEPPTIST
PPCVPFTFSSPIVKATAASPPAFSPSAGFTFSAPVAKLGPSMSNGKLSSPIVAALKSATS
KSPEDFDGLFKPAKALKQGSVLDLLKAPGFASPVARTSPGPDVALLQTSTHTTAPCSSSS
STTTNTSLSSKGFSDVFKAPPGWSCDVCMVQNKPSETKCACCMAPQPSSSKSMDITPSAT
TSVGLESSSTNTSSTTTTSAGFGAMFAKPAGTWECDTCLVLNKPDAVKCVACETAKPGTG
LKPSLTLPSAFSAVKTVSPPTAPVSTVFIGFGDKFKKPEGAWECDTCMVENKAENTKCVA
CMSAKPGASAGASSSASSAPVFGLGDAFKMPEGAWECEVCFVQNKAADVQCVACQGVKPG
AKVEPKGFGLSSGGTSTSNSGGFKFGAPDSTSGSGSVGFKFGGSLTESSSSSSDGFKFGV
PFGSSSSETTSKDTTASSGFKFGSSSEGFKFGTASSDDKKSDQSAAGSGFKFGASGGIAF
GIGSSSADGNSSKGGFTFGLSKPEEKTPDTTTNPPLSFTPPAASQEKGEGAGSSNDATST
TNTTIGSVFGSLASAAQQGGSAFGSLQTDKESAAPTFTFGKQEEKKEAAAAVSSAQSAFL
FGAANKDADAAPPAAANTGGFSFSKPSAPTEQTPPAYNFGKAADQSETSAAEAPKPSFSF
GQSAADSSTATKPAFSFMAGNPANATTSSSTTSTPSLFGTTNSINTSSAQAPAPSGFMFG
QSAAAPGDAPPAKAFVFGQSRDSQVPAPPAAPLNSTPAPSPAQPFIFGAPTTAAAPAAAA
AAAPSFGFGAIAPTATSTSVPSAPFAFNPAPSAGFGANQNSSFGSTFGSPFTATPSQPPA
FGAKSNTTPVFGQQTPSTPVFRAAANSAQGGGFQFGGASAFGATNNASAGVFTFGAGGAP
SPGPPANTSIAPQSGPPGGGFNFSQPPAFNIGSAKTFTAAPAGQQTIAGRKIKTAVRRRK
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atgacagctatccggcgccgaaacgccgatagacactcagacgaaagagccatggcggcc
acgggtggagggaaaattagaagcaggagatatcacatcgcctctaaaccttacgccaag
aataaacagcaaccatcagggctcatcagtcgagtgactgacacggtgaagagcatcgtt
ccttcctggctgcagaaatacttcaagaatgaagatgctcctgaaggagcagaggatgtt
cttgggacggtccataactgcctgccaccacctcctccaaatggcagcgaagaggcacct
cctccccttgatgggtgtgactccccagagctaagcaccagtaacatggagccctcaacc
agccgggcgtccctaaactttcaagattatgttctttctcgacctccattgagtcgttcc
cacctccacttccctccgctggaagcctcctccccgaccctgggggcctccgtcagccat
ttctcccaaccctccacctcctctgcccctggacccttttccacaggcttctccttggtc
aaagaaatcaaggacaacctctcgcagcacgaagatgataacatctccaccactagcggc
ttctcttctcgtgcctcagacaaagatgtccctacttccaaaacggcgtcgtttcctcaa
ctttggtcccccgagatggagagaacacactcaggccctcaaccggcccagtccagtctg
agaaagccttcttttaacctgtctgtatttggaaattcctccaattcgtcattaaacagc
acattactaaacaccagccagctgggagattcacccttctaccccgggaagaccatgtac
ggtggggcagctgcagtcaggacctcccgtggtcgccctggaacaccgtaccaggcccca
gtgaggagacagatcaaggccaagcctgctggggctcaaccctgtggggtgaccagcgcc
acagccagacgcatccttcagtccttggagcgaatgtcgagccccctggctgatgccagg
agaatcccagcagcagcagcagcctcatccccgctgtcagcatcaatggatggcgcaaat
ctagatgtttcacagtcaaaaaggaaacgtatggattccagccttccgcctgtgcagaag
ctggtggttccggttgcagcgttggtgtcaggaaaccgctctgtgtccttcaggccgacc
ttaactcctggaggagtgagccgaactcttgacaggacccccagagagacgcctaagaga
caatcaccgcaacttcccgaagctaccccgggtccgtctaaaagcacaatgattcccagt
ggcccggtctatcctctgtccagcacgcctgcagccagcagcgtgagctccggagggggc
aagatgaagagggagaggaccagtacacggccttcctctaagcgctctgaagaggacgag
gtggctgaggtactggacctaccagcaatatctcttcccatcagcacctctgccttgcca
agcttcagcttctctcctcttcccccgctcgccaccaccaacagcgcagctcccaacctc
acgcctgtgactcccgctaaggaagaggtcacaaataaggagccaccaacgatctctaca
cctccctgtgtaccctttactttttcctcccctattgtcaaagcaactgctgctagtcct
cccgccttttccccctcagctggattcacttttagtgcacccgtagcaaagttaggaccc
tccatgtcaaatgggaagctgtcctctcccatagttgcagcattgaagtcggcaaccagc
aaaagtccagaagattttgacgggcttttcaagccagctaaggccctgaagcagggcagt
gtgttggatcttctcaaggcgccaggctttgcttctcctgttgcgcgcacttctccaggc
ccagacgttgctctgctgcagacctccacacacaccacagccccctgttcctcctcctcc
tccaccaccaccaacacctccctctcttcaaaagggtttagcgatgtgttcaaagcccca
ccaggctggagttgtgatgtctgcatggtgcagaacaagccgtcagagaccaaatgtgct
tgctgtatggccccccagccctcgtcatccaaatctatggacattacaccttcagcgacc
acctcggttgggcttgagagcagcagcacgaacaccagctccaccactacaacgagcgca
ggttttggcgcaatgttcgccaaaccagcaggaacatgggagtgtgatacatgcctggtc
ctaaacaaacccgacgcagtgaagtgtgtggcctgtgaaacggccaaacctgggacaggg
cttaaaccctcactgactcttccttctgccttctcagctgttaagactgtgtccccgcct
acagcccccgtttctacagtgttcatcggatttggagacaagttcaaaaaacccgagggt
gcatgggaatgtgacacgtgtatggtagaaaacaaggcggagaatacaaagtgtgtggcc
tgcatgagcgctaaaccaggagcctcagcgggcgcctcttcgtcagccagcagtgctcca
gtgtttgggttgggagatgcgttcaagatgccagagggtgcctgggagtgcgaggtctgt
tttgtacagaataaggcggctgatgtccagtgtgtcgcctgtcagggagtcaaacccgga
gccaaagtggaacccaaaggttttggtttgtcatctggcgggacttcaacctctaattct
ggaggttttaagtttggtgcaccagacagtacatcgggatcgggatctgtaggtttcaag
tttggaggctccttgacagagtcgtcctcttcatcgtccgatggattcaaatttggagtc
ccgtttggaagctcctcatcagaaacaacttctaaagacactactgcctcgtcagggttc
aaatttggcagctcatctgagggctttaaatttgggactgcctctagtgatgataaaaag
tctgaccaatccgctgcaggttctgggtttaagtttggagcaagcggtggaatagcattc
ggaattggctcatccagcgcagacggtaactcctctaagggcggcttcacctttggactc
tcaaaaccagaagagaaaacccctgacaccaccaccaacccaccccttagtttcactcct
cctgctgcctcgcaggagaaaggtgagggtgctggatcatcaaatgacgccacatccacg
accaacaccaccatcggctcggtatttgggagtttagcgagcgccgcacaacagggtggc
tctgcttttggatccttacaaacggacaaagagtcagctgctcccacgtttacgtttgga
aagcaagaggaaaagaaagaagccgcagcagccgtctcgtcggctcagtcggccttcctc
tttggtgccgctaataaagatgcagatgctgcaccaccagcagcggccaacacgggaggc
ttttcctttagcaagcccagtgcgccaacagaacaaactcctcccgcctacaactttggc
aaggcggcagaccagagcgaaacgtctgctgcagaggccccgaagccctcttttagcttt
ggacaaagtgctgcagattcttctactgcaacaaaaccagcgttttccttcatggccggt
aatcccgccaacgccaccacttcgtcatccaccacctcgacgccaagtctgttcggcacc
accaacagcatcaacaccagctccgctcaagcccccgctccgagcggcttcatgttcggt
caatccgccgcagcgcccggtgacgctcctccggccaaagccttcgtcttcggccagagt
cgggacagccaggtgcccgcgccgccagctgctcctctgaactctacgcccgctccatcc
ccagctcagccgtttatctttggtgctcccaccactgcagccgctcctgctgccgccgcc
gctgccgctccatctttcggctttggagcaatcgcacccaccgctacctcgacttcagtt
ccctctgccccatttgcattcaacccggccccctctgctggcttcggggccaatcagaat
tcttcattcggttccacctttgggtcccccttcacggccacaccttcccagcccccggcc
tttggggccaaatccaacactacgccggtctttggacagcagacaccctccacacctgtc
tttagggcggctgctaattctgcacaaggtggaggctttcagtttggaggagccagtgca
tttggagccacaaacaacgcctcggcaggagtgtttacttttggagcaggaggggcacca
tctcctggcccccctgcaaacacctccatcgcaccacagtcaggaccgcctgggggtgga
tttaatttttcacaacccccagcatttaatattgggtcagcaaaaaccttcaccgccgca
cctgctgggcagcaaacgattgccgggcgcaagatcaagacagcggtgcgacgcagaaag
tag
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