Gasterosteus aculeatus (three-spined stickleback): 120828788
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Entry
120828788 CDS
T07457
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gat03400
]
120828788 (apex2)
Enzymes [BR:
gat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
120828788 (apex2)
DNA repair and recombination proteins [BR:
gat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
120828788 (apex2)
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
zf-GRF
Exo_endo_phos_2
Amastin
Motif
Other DBs
NCBI-GeneID:
120828788
NCBI-ProteinID:
XP_040048313
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Position
XII:4851076..4853859
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AA seq
540 aa
AA seq
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MKIVTWNINGIRTFGGGIKKALDSLDADIICVQETKVTRDLLDERTAIVEGYNSYFSFSR
GRSGYSGVATYCKDSATPFAAEEGLTGLLTNHEGAVGCYGDQKDFSSEELQPLDNEGRAV
ITQHRIMCGEKEKMVTVINVYCPRADPEKPERKQFKLQFYKLLQCRAEALLKEGSHVIVL
GDVNTSHRQIDHCDPSDTDDFSENPGRKWLNSFLHSGREEGETKEEEPNEESEVTSSETN
CSGKFVDTFRLFHPTRTSAFTCWSTLTGARQTNYGTRIDYVFADCRLAKEQFVAADIMPE
VEGSDHCPVWGRLSCCLLASSKPPPLCTRYLPEFAGKQQTLSRFLVKVDQRSAAWEKRDA
LPGSQEEGEKRENSNPSGAGNASGKRRSSTADSVAPKGKKTKTVKTSPNPQGSLLSFFKP
KLANAFPSTEAPLKQRVGKPLRVTPSQEAPPPTGPLAARHAAGNPEAKKGPAPSGFWKSV
FHGPPPPPSCKVHGEPCVLRTVKKEGPNVGRQFFVCARPQGHASNPEARCNYFTWVDKGK
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgttacctggaacataaatggcatcaggacgttcgggggcggcattaaaaag
gccctcgattcactggacgccgacattatttgcgtccaagaaacaaaagtgacaagagat
ttgcttgatgaaagaactgccatcgtcgaaggctacaactcttatttcagcttcagtcga
ggacgcagcggctattcaggggttgccacttactgtaaagacagtgccactccgttcgct
gctgaggagggtctcacaggtctgctaaccaaccacgaaggggccgttggatgttacggt
gaccagaaggacttcagcagtgaggagctgcagcctttggacaatgaaggacgagccgtt
atcacccagcacagaattatgtgtggggagaaagagaaaatggttactgtaataaatgta
tactgtcctcgagccgaccctgaaaagccggagcgaaagcaattcaagctgcagttctac
aagctgcttcagtgtcgggctgaagctctgctgaaagaagggagccacgtgattgttttg
ggagatgtgaatacatctcaccggcaaatagaccactgtgaccccagcgacactgatgat
ttcagtgaaaaccctggaaggaaatggctaaattcctttttgcacagtggcagagaagag
ggagaaacgaaagaagaggagcccaatgaagaatccgaggtaacttcctcagaaacaaat
tgcagtggaaaattcgtcgatacctttcgcctcttccacccaacccgcaccagcgccttc
acctgctggagcaccctcaccggcgcgcgacagaccaactacggcacgcgcatcgactac
gtattcgctgactgccgactggccaaggagcagtttgtggcagccgacatcatgccggag
gtggaggggtcggaccactgccccgtgtgggggcggctgagctgctgtctcctggccagc
tccaagcctccgcccctctgcacgcgctacctgcccgagtttgccggcaagcagcagaca
ctctcccgcttccttgttaaagtggaccaaaggtcagctgcgtgggagaagagggatgca
ttacccggatctcaggaggagggggaaaagagggagaattctaacccgtccggagcggga
aacgcctccggcaaaagacggtcctcgacggcagactctgttgcgccaaaggggaagaag
actaagacagtaaagacttctccaaacccgcaggggagcctcctgtcctttttcaaaccc
aaactggcaaatgcttttccctctaccgaggcccctctgaagcagcgtgtgggaaaaccc
ctccgagtgactccctcccaagaagcgccgccgccgacgggacctttagccgcacggcac
gctgcggggaacccggaggccaagaaagggccggcgccctcggggttttggaagtctgtt
tttcacggaccgccaccaccgccctcctgtaaggtccacggggaaccctgtgtgcttcgc
accgtgaaaaaggaagggccgaacgtgggcaggcagttctttgtgtgtgcccgtcctcag
ggacatgcctccaaccccgaggctcgctgtaattactttacatgggttgacaagggcaag
tga
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