Gasterosteus aculeatus (three-spined stickleback): 120828950
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Entry
120828950 CDS
T07457
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
PYRIN
NOD2_WH
LRR_6
PRY
SPRY
LRR_1
LRR_4
Arf
LRR_8
DED
Motif
Other DBs
NCBI-GeneID:
120828950
NCBI-ProteinID:
XP_040048584
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All DBs
Position
I:3486560..3494414
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AA seq
1016 aa
AA seq
DB search
MEMVRKDILNILKELEEEDYKEFKWHLRNHSSPEDPRSIPPCDLENADRMDTVDLMERCY
DTDSVQVAMKVLEEMQKNDLAKKLSKRNSNPTGEPNPVGGDRGQEIIDNCQRELKSNLKK
KFQCVFEGIAKAGNTTLLNEIYTELYITEGGTAEVNEEHEVRQIETSSWKPDKPETTIRQ
EDLFKASAGRKKPIRTVMTKGVAGIGKTVLTQKFTLDWAENKDHQDIQFTFPFTFRELNV
QRDKKYSLVGLVHHFFSDTKAAGICRFEKFQVVFIFDGLDECRLPLDFHNNEILTNVTES
ASVDVLLTNLITGKLLPSARLWITTRPAAANQIPPECVGMVTEVRGFTDPQKEEYFRKRF
RVEEQASAIISHIKISRSLHIMCHIPVFCWITAGVLEEVLKAREGGELPKTLTEMYIHFL
VVQSKVKKVKYDGGAETDPHWSPESRKMIESLGKLAFDQLQKGNLIFYESDLTECGINIR
EASVYSGVFTQIFREESGLYHDKVFCFVHLSVQEFLAALHVHLTFISSGVNLMSTSVLTG
FLAVFGAKPKTKRLYKSAVDKALQSPNGHLDLFLRFLLGLSLDTNQTHLQGLLKQTGSLS
QINRRTVQYIKKKISKNVSPEKNINLFHCLNELNDGSLVEEIQQSLSSGRLSTDKLSPAQ
WSALAFILLSSQENLEVFDLKKYSASEDALLRLLPVVKASNKALLSGCNLSERSCEALSS
VLSSQSSSLRELDLSNNNLRDSGAKRLSAGLESPHCELETLRLSGCWITEEGCAALVSTL
SSNPSHLRELDLSYNHPGDSGVKLLSTRLDDPQWRLESLRVEPAGVRWLRPGLELTIDTN
TVNRKLKLSHNNRKVTLGMNKDESYPDHPERFDYRPQLMCRTGLTCRCYWEVEWREDVDV
SVSYRGIRRKGGSDDCWFGMNDQSWSLRCSDEGYSVCHNKKKSPITSSSSSSSSGRVAVY
VDFLAGSLSFYRVSSDTLIHLHTFNTTFTEPLYPGVKSMDESRLLGYNTYNNNCYR
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggagatggtcaggaaggacatcctcaacattttaaaggagcttgaggaggaggactac
aaagagttcaagtggcacctgcggaaccattcaagcccggaagacccccgatcaatccca
ccctgtgacctggagaacgcagacaggatggacacggtggacctgatggagcggtgctac
gacacagactcggttcaagtggccatgaaggttttggaagagatgcaaaagaacgatctg
gccaaaaaattatccaaaaggaactctaaccctacgggtgaaccgaatcctgtgggagga
gatagaggtcaagagattattgacaactgtcagcgtgaactcaaatctaacttgaagaag
aagttccagtgtgtgtttgaggggattgctaaagcaggaaacacaacccttctgaatgag
atctacacagagctctacatcacagagggagggactgcagaggtcaatgaagaacatgag
gtcagacagattgaaacatcatcctggaaaccagacaaaccagaaacaaccatcagacaa
gaagacctcttcaaagcctcagctgggaggaagaaaccaatcagaacagtgatgactaag
ggagtggctggcattgggaaaacagtcttaacgcagaagttcactctggactgggctgaa
aacaaagaccaccaggacatacagttcacatttccattcaccttcagagagctgaatgtg
cagagagataagaaatacagcttggtgggacttgttcatcacttcttcagtgacaccaaa
gcagcaggaatctgcaggttcgagaagttccaggtcgtgttcatctttgacggtctggat
gagtgtcgactccctctggacttccacaacaatgagatcctgactaatgtcacagagtcg
gcctcagtggatgtgctcctcacaaacctcatcacggggaagctgcttccctctgctcgc
ctctggatcaccacacgacctgcagcggccaatcagatccctcctgagtgtgttggcatg
gtgacagaagtcagagggttcactgacccccagaaggaggagtacttcaggaagaggttc
agagttgaggagcaggccagcgcgatcatctctcacatcaagatctcacgaagcctccac
atcatgtgccacatcccagtcttctgctggatcactgctggagttctggaggaggtgttg
aaggccagagagggaggagagttgccgaagaccctcactgagatgtacatccacttcctg
gtggttcagtccaaagtgaagaaggtcaagtacgatggaggagctgagacggatccacac
tggagtccagagagcaggaagatgatcgagtctctgggaaaactggcctttgatcagctg
cagaaaggcaacctgatcttctatgagtccgacctgacagagtgtggcatcaacatcaga
gaagcctcagtgtactcaggagtgttcactcagatctttagagaggagagcggactgtac
catgacaaagtgttctgcttcgtccatctgagtgttcaggagtttctggctgctcttcat
gtccatctgaccttcatcagctctggtgtcaatctgatgtcaacctccgtgttgacaggt
ttcctagctgtctttggagccaaacctaaaaccaaacgtctctacaagagtgctgtggac
aaggccttacagagtcctaatggacacctggacttgttcctccgcttcctcttgggtctt
tcactggacaccaatcagacacacctacaaggtttgcttaaacagacaggaagtctctca
cagatcaatcggagaacagtccagtacatcaagaagaagatcagcaagaatgtgtctcca
gagaaaaacatcaatctgttccactgtctgaatgaattgaatgatggttctcttgtggag
gagatccaacagtcccttagttcaggacgtctctccacagacaaactgtctcctgctcag
tggtcagctctggccttcatcttactgtcatcacaagaaaatctggaggtgtttgacctg
aagaaatactctgcttcagaggatgctcttctgaggctgctgccagtggtcaaagcctca
aacaaagctctactgagtggctgtaacctctcagagagaagctgtgaagctctgtcctcc
gttctcagctcccagtcctctagtctgagagagttggatctgagtaacaacaacctgcgg
gattcaggagcgaagcggctgtctgctggactggagagtccacactgtgaactggagact
ctcaggctgtcaggctgttggatcacagaggaaggatgtgctgctctggtctcaactctg
agctccaacccctctcatctgagagagctggacctgagctacaatcatccaggagactca
ggagtgaagctgctgtctactaggctggacgatccacaatggagactggaaagtctgagg
gtggagcctgctggagtccgatggttgagaccaggtctggaactcacaatcgacacaaac
acagtaaacagaaaactcaaactgtcccacaacaacaggaaggtgacacttgggatgaac
aaggatgagtcatatcctgatcatccagaaagatttgactacaggcctcagctgatgtgt
agaactggtctgacttgtcgctgttactgggaggtcgagtggagagaagacgttgatgta
tcagtgagttacagaggaatcaggaggaaaggaggcagtgatgactgttggtttggaatg
aatgatcagtcctggagtctgagatgctctgatgaaggttactctgtgtgtcacaataag
aaaaaatcacccatcacctcctcctcatcctcctcctcctctggtagagtagcagtgtat
gtggattttcttgctggctctctgtccttctacagagtctcctctgacacactgatccac
ctccacaccttcaacaccacattcactgaacctctttatcctggtgtgaaatccatggat
gaatcacggctgcttggttacaacacctacaacaacaactgctacaggtga
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