Gasterosteus aculeatus (three-spined stickleback): 120829298
Help
Entry
120829298 CDS
T07457
Name
(RefSeq) LOW QUALITY PROTEIN: protein SOGA1-like
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
DUF4482
TSC22
TPR_MLP1_2
Rsa3
Motif
Other DBs
NCBI-GeneID:
120829298
NCBI-ProteinID:
XP_040049220
LinkDB
All DBs
Position
XII:14351305..14413221
Genome browser
AA seq
1862 aa
AA seq
DB search
MTKTKEVDVHSAPTQVVFASPKERRLHLLRQKMDSGAGTEEGSGGGQPRHAEPSATVSGR
PPGEKKKKKINRAPSPARPKEAPGWSLTKIRGGIGTPTLSVKPGAIHLGSRVSRRSPVGX
LPGKDGKAEKSGGGKLAGKASPTPSKTAKAAKGTGGRRKASDASTGSDDASKDSGCATGK
LSPTDSSSELSDCASEENKLSADAASSDAESRSSRGGGPDGERPLRDGALADRARRHAAA
TSARSSAAERDCRDRLSLGAETAEGGVSPGEERSATSFDSRVPASTSLAFSDLTEEFMDG
MHEEFVREIEELRSENDYLKDEMEELRSEMLEMRDMYMEDDVYQLQDLRQQLEQANKTCR
ILQYRLRKAERRSVRVAQTGQVDGELIRTLEQDVKVAKDVSIRLHSQLDSVEKKRSRLDQ
ENEELRVRLQDLEVAKQVLQQEIDKSSQRKRGARANNKPDKKLCPQEDSSDLKCQLHFAK
EETALMCKKLTKLVKDGDAMKEELAKFRSLYGDVNASLTVEEVADSPHTREAEIRVHLKL
VEEEANLLSRRIVELEVENRGLRAEMDDMKGPQDGPQELTGIGGSLGLGGAMVLGGGASS
ENVMELQRHLQFVEEEAELLRRSLIEIEEQNKLLMNEINRYKSDLPPPTSALSSNSLAAL
TDGLLSDSRVHCIQEGAVLISTDAPAHEEEIRLARLQIGELGGKVKKLQYENRVLLSNLQ
RCDLASYHAPSSSSSSSSLRLALETDAEAGDSAECLPSPPHRKEPVGGETDALEIKERKK
KVEDNADAATSLAGYLGQKDHDALLAMRDQARLVSTAIQLLTSPESNCLSSSPSIYHKVC
SNEAAEPCDPEKPHTQVSELSDLADRPLVGALTSRLQALHTQLQAFVEQVDILGKPPAGG
RDPRVEGASPLASPCASPPCSGDGQDGVNAAVEQRPDSRDQSGPEGVARFEERSQSDSEE
KRMQDDGQLERGEKEARDAPPVDGGDLRAGLSEAEESALGAQVELEREKQARRETTLMLT
QHQEEHQKALLRRDFQLESLGLQARLQQRLWSQERTLLVQESQHLKQALLLLSLRLRCFL
KQWRLGCRKDTQWKDFLEMNSLKDLYLLLEEENLTSPAHQADRRAATDEQPLSPTIKSSA
VSSTLADLKVTLQDLSGELRQERQGSQELTQQFAKAKASWEVERTELKSLITQLETKSGK
AAALSVSDAPDPPDLKVALKREREEHQHLLADSYAAVMDLTKQLQIGERNWGREKMELLE
MFSQERAQWEQRLGEATAQQGKSKSFGSESSADTVVANGTGSPRTKSTSDLDGPEFHRAQ
FSVPELGDLTRKNWTYLTNETPQVGYTCKTWDGPSGSCSSSVGSDLHLETVQRSHTAPDR
TSIRMYYSPPAVRRTEHRRRSREAREPERAQDGSSSLGWLSSLSKQHRELLESRSGCVAG
SIPSVASSSGSGGSVDGRAPTSAFHGLEIGEISANLSDDMKEMTNCVRQAIRSSSLERKP
SKEPGSQAALGVSTRSTQTNWQYVSIGLQTDNLPSSRGMGLHSKAWSTRPSSTTTSSLAS
ARSRQISTSLDKVHSRIDRPCCSPKYGSPKLQRRVSSGSTSRLDGSPSSRDRSLWSLQQR
PLSGGGRSAWARSTTTRDSPVLNGLTDGLSSLFSVVEHAGSTESLWRGDGGASQGASPAR
QPAPAGKPTSAPVCGSDPGSQRCGGLVQEFFRSVCSSRGPGAVTLSEERALRDPGGALGG
PGVSGGFAGVDEPKPAECVAVGIGGFGALAVSNDSVTKIVNKRFMRQTTGEEMVSIMGGG
KETPSSAAASVSEDAPCDCAAQSPSCLARPSRAAARHSLGQCKHRPPECPAAAEEKADTC
NE
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaacaaaggaggttgatgtccacagcgccccgactcaggtcgtcttcgcctcg
cccaaggaacggagactccatctcctccggcagaagatggacagcggagccgggacggag
gagggctcgggcggcgggcagccgcggcacgcggagccctccgcgacggtgagcggccgt
cccccgggcgagaagaagaagaagaagatcaaccgggcgccgtccccggccagaccgaag
gaggcgcccggttggtcgctcaccaagatccgcggggggatcgggaccccgacgctgagc
gtcaaaccgggagccatccacctgggcagccgcgtgtcccggcgcagccccgtggggngg
ctccccgggaaggacggcaaggcggagaagagcggcggcgggaagctggcgggcaaagcc
tccccgacgccgtctaagacggccaaggcggccaagggcaccggcggccggaggaaggcg
tcggacgccagcaccgggtccgacgacgcgtccaaggactccggctgcgccaccgggaag
ctgtcccccaccgacagcagctccgagctgtcggactgcgcctctgaggaaaacaagctg
tccgccgacgcggcgagcagcgacgccgagtccaggagcagccggggcggcgggccggac
ggggagaggccgctcagggacggcgcgctggcggacagagctcgccgccacgccgccgcc
acgagcgcccgttcctccgccgcggagagggactgcagggaccgcctgtccctcggcgcg
gagaccgcggagggcggcgtgtcccccggcgaggagcgctcggccacctcgtttgacagc
agggtccctgccagcacgtcgctggctttctccgacctcacggaggagttcatggacggc
atgcacgaggagtttgtccgggaaatagaggagctgagatcggagaacgattacctgaag
gacgagatggaggagctgaggtctgagatgctggagatgcgggacatgtacatggaagac
gacgtctaccagctgcaggacctacggcaacagcttgagcaggcaaacaagacctgccgc
atcctgcagtaccggctgaggaaggccgagcgccgctcggtgcgcgtggcccagacgggg
caagtggacggggagctgatacgaacgctggagcaggacgtcaaagtggcgaaggacgtg
tccatccgtctccacagccagctggacagcgtggaaaagaagaggagccgcctggaccag
gagaacgaggagctgcgggtccgcctgcaggacctggaggtggccaaacaggtcctgcag
caggagatcgacaagagctcccagaggaaaagaggagcacgagccaacaacaaacctgac
aagaagctctgtccacaggaggacagctcggaccttaaatgtcagctccacttcgccaag
gaggagacggccctgatgtgcaagaagctgaccaaactggtgaaggacggcgacgccatg
aaggaggagctggccaagttcaggtcgctgtacggggacgtcaacgcctcgctcaccgtg
gaggaggtcgctgactcccctcacacgcgtgaggcggagatcagagtccacctgaagctg
gtggaagaggaggccaacctgctgagtcggcgcatcgttgagctggaggtggagaacagg
ggcctgcgagcagagatggacgacatgaagggaccacaagatggtccgcaggagcttact
ggtatcggtggcagtcttggcctgggaggggccatggtactcgggggaggggcttcatct
gaaaacgtcatggagcttcagcgacacctccagtttgtggaggaggaggcggagctgctg
agaaggtctctcatcgagatcgaggaacagaacaagctcctgatgaatgagataaaccgc
tataaatcggatctgccgcccccgacgtccgcactgtcgtccaactccctggcggcgctg
acggacgggctgctcagcgacagccgggtgcactgcattcaggaaggggcggtgctcatc
agcacagacgccccggcccacgaggaggagatcagactggcgaggctgcagatcggagaa
ctgggcgggaaggtgaagaagctgcagtacgagaaccgagtgctcctgtcgaacctgcag
cgatgcgatctggcctcctaccatgctccttcctcctcctcctcctcctcctcactgcga
ctcgctctggagacagacgcagaggccggagactcagcagagtgcctcccaagcccgccg
caccgcaaagagccagtcggaggagagacggacgccctggagatcaaggaacggaagaag
aaggtcgaggacaacgctgacgcagccacctcgctcgctgggtacctggggcagaaggac
cacgatgccttgctggccatgagggaccaggctcgcttggtttccacggcgattcagctc
ctgacctccccggagtctaactgcctctcctcctccccgtccatctatcacaaggtctgc
agcaacgaggcagcagagccgtgtgacccggagaaacctcacacccaggtttcagagctg
tccgacctggcggaccggcccttggttggtgctctgaccagcaggctccaggccctgcac
acccagctgcaggcctttgtggagcaggtggacatcctgggcaaacccccggctggtggg
agggaccctcgggttgaaggagcgtctcctctggcctcgccctgcgcctcccccccctgc
tcgggggatgggcaggatggagtgaacgctgccgtggagcagcggcccgattctagggac
caatcagggccggagggggtagctcgattcgaggagcgcagccaatcagacagcgaggag
aagcgaatgcaggacgacggccagctggaacggggagagaaggaggcgcgcgatgcaccg
cccgtcgatggcggcgacctccgggccgggctgtctgaagcggaggagtcggccctcgga
gcccaggtggagctggagagggagaagcaggctcggagagaaaccactctcatgctcacg
cagcaccaggaggagcaccagaaggctctgctccgccgcgacttccagctggagagtttg
ggcctccaggcccggctccagcagaggctgtggagccaggagaggaccctgctggtccag
gagtcccagcacctcaaacaggccctgttactgctcagcctcagactacgctgcttcctc
aagcagtggaggctgggctgcaggaaggacacccagtggaaggacttcttggagatgaac
agcctgaaggacctgtatctgctgctggaggaggagaacctaacaagccccgcccaccag
gcagacaggagggctgctacagacgaacaaccactcagcccaaccatcaagtcgagcgcc
gtgagcagcaccttggcggacctgaaggtgacgctgcaagatttgagcggcgagttgcga
caggagagacaaggctcccaagaactcacacagcagttcgccaaggccaaggcatcatgg
gaagtggagcggaccgaactaaagagcctcattacgcagcttgagaccaaatcaggaaaa
gcggcagcgctgtccgtctctgacgctccggacccgccggacctgaaggtggcgctgaag
agggagcgagaggagcaccagcacctcttggccgattcctacgcagccgtgatggacctg
acgaaacagcttcagatcggggagaggaactggggcagagagaagatggagcttctggag
atgttcagccaggaaagagctcagtgggagcagagactgggagaggccactgcacaacag
gggaagtcaaagtcatttggcagcgagtcttctgcagacacagtcgtagcgaatggaaca
gggtcgccgagaaccaaatcaacatcagacctggatggcccagaattccaccgtgctcag
ttttctgtcccagagctgggtgacctcaccaggaagaactggacctacctgaccaatgag
accccacaggttgggtacacctgtaaaacctgggacggtcccagcggatcttgcagcagc
tcggtgggatcagatctgcatctggagacggtccagaggagccacactgctccagaccgc
accagcatccggatgtactacagcccccctgcggtgagacgcacggagcaccgaaggagg
agccgggaggccagagagccagagcgggcccaggacgggagctcctccctggggtggctg
agctcgctgtccaagcagcacagggagctgctggagagcagaagcggctgcgttgctggt
tcgatccccagcgtcgccagcagcagcggcagcggcggctctgtcgatgggagggcgccc
acgtcggcattccacggcttggagatcggggagatttccgccaacttgagtgacgacatg
aaggagatgaccaactgtgtccgccaggcaatacgctcttcctccctggagaggaaaccc
tccaaggagccggggagtcaggcggcgctgggcgtgtccaccaggtccacgcagaccaat
tggcaatatgtcagcatcgggcttcaaacagacaacctccccagcagcagagggatgggc
ctacactccaaagcctggtctactcgcccctcgtcaacaaccacgtcgtcgctggcgtct
gctcgaagccggcagatatccacatccctggataaagtccacagccgcatcgacaggcca
tgctgctcacccaagtatgggtcaccgaaactgcaacgcagagtgtcctccggatccacc
tccagactggacggcagtccctcctccagggaccggagcctgtggagcctccagcagaga
cccctcagcggaggaggacgctcggcctgggctcgctccaccaccaccagggacagcccg
gtcctgaacggcctcaccgacggcctctccagcctcttcagcgtggtcgaacacgctgga
agcacggagtcgctgtggaggggggacggaggagccagccagggggccagtccagctcgc
cagcccgcccccgcagggaagcccaccagtgcaccagtctgcggctctgaccccggctct
cagcgctgcggaggcctggtccaggagttcttcaggagcgtgtgcagcagccgcggccca
ggagcagtaacactgtccgaggagagagcgctaagagaccccggtggcgccctcgggggc
ccgggggtctctgggggttttgccggcgtggacgagcccaagcctgcagagtgtgtggcg
gtcgggatcgggggcttcggagcgctggctgtcagcaacgacagcgtgaccaagatcgtc
aataagaggttcatgagacagacgaccggggaggagatggtcagcatcatgggaggaggg
aaagagacgccgagcagcgccgcggcatccgtgagcgaggatgcaccctgtgactgtgct
gcccagtcgccctcctgcctcgcccgaccatcaagagcagcggcgcgccattccctcggc
cagtgcaagcaccgcccgccagagtgtcccgcggcggccgaggaaaaggcagacacgtgc
aacgagtga
DBGET
integrated database retrieval system
