Gasterosteus aculeatus (three-spined stickleback): 120832407
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Entry
120832407 CDS
T07457
Symbol
arid4a
Name
(RefSeq) AT-rich interactive domain-containing protein 4A
KO
K19194
AT-rich interactive domain-containing protein 4A
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120832407 (arid4a)
03036 Chromosome and associated proteins [BR:
gat03036
]
120832407 (arid4a)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Helix-turn-helix
ARID
120832407 (arid4a)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
120832407 (arid4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBB1NT
ARID
Tudor-knot
Tudor_2
PWWP
Motif
Other DBs
NCBI-GeneID:
120832407
NCBI-ProteinID:
XP_040054571
LinkDB
All DBs
Position
XV:200872..212980
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AA seq
1374 aa
AA seq
DB search
MKAADEPPYLTVGTDVSAKYRGAFCEAKIKTVKRMVKVKVNLKGESTTQVVQDDQVKGAL
RVGSTVEVKTNEGLSSEAVISKLTDASLYTVVFDDGDEKTLRRTSLCLKGERHFAESETL
DQLPLTNPEHFGTPVIGKKSNRGGRRSSQAVAEEENESSSSDDEDDDRRRLNDELLGKIC
SVESEEESSSWYLALVVSPSCNEELQVKKDQCLVRAFSDSKFYTVARRHVHTFISTRSEF
SSRKGFEAAQMFLRTGEVPDMWKMDMSQILDSSSSDDEEKESEEEDEEETKKKKRIKEEP
EEEEPDPEERDRFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYRLGGCHKIESG
TVWKQVYVDLGIPVLNSAASYNVKTAYKKYLYGFEEYCRSATITFRTIHHNNPRPPTTLA
NQKQAGAELSRPPALPENVDPVKDALEEAESESEDVKDRQSSPRGRRRCVSSQLTAESGS
PSTPDKGGEDNSEEQREVRRRSNRRMDDSDKGSEEEEEGEGDDDDVEDDDDDDDDDDEDE
DEDDDDDERGMAREGCEEEEEEEGDSVTGTKVRVKYGRGKTQKIYEAHIKKTDLDNGEQF
YLVHYYGWNVRYDEWVKADRLIWPLEKGRQKRRRKKVKNKDEPETERDEDQPPSAVLKPP
GAKRGRPQTGTPPGGSAGHSVSKTPSSEGRSNGRSSRTEMPSNMANGDNTPRRRTRRTSG
LYDSDQASNEDSGNSSDDSESESPPDKKPSPRQGRTEGPSCKEEEGKGGEEEEPGQVADV
KTAANNNTVATATAGQTPVAMTLQRPIMPQEKTDKLLSQLKKEAEQREEPTVEAAMLLVH
LDEEMSSVQDSDHLFPAQEVFNKRPSPHAITSPPDAIRAFLEENVSSPQPVSAEEEDSRS
TPLSSPRVKGRRALRETVSETPPRIFLSTCPAHKEVSPPCSVLKRQDEPMVVLHCLPTQR
LSPESPTADSDTDSATEEEEEIPEKRSSSTLKRKAAEQRETDKKLRPERRQLEAPCPETP
PVPSKMALGASPKGLPSPLHRAELEKSEGAMKAEDWPRLEDTPKEGSEELLMGGASKESE
VVPGTPAPDSSPAEEVELQIGPEALVCHEVDLDDPDEKEKPTAPEHLLLMIREQQLAPPP
KIIHASLPSPHLPQPQVMPFLPEPAPCTAPSPEELHPARSTGGEERGELQGDSSPGFDGS
ASSTFVVSLQESKDRGQKRMPDCNLSPMAKKQKRNQKRLSTPGKVEKNGAGNSSDSEDQP
RLSQKSRFVLSPSSHSKDKHTFSPQRAYKWTFQLDELDNMSSTERISFLQEKLQEIRKYY
MTLKSEVASIDRRRKRLKKKEREVSHTTSSGSSDTGMSPSSASPTQSTVAVECR
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcagcagacgagcccccctacctgaccgtggggacggacgtcagtgccaaatac
agaggagccttctgtgaggccaagatcaagacggtgaagcgcatggtgaaagtgaaggtg
aacctgaaaggcgaaagtacgactcaggtggtccaggatgaccaggtgaaaggagctctg
agggtgggctccacggtggaggtgaagactaacgagggtttgtcgagcgaggccgtcatc
agtaagctgacggatgccagcctctacactgtggtgttcgatgacggagacgagaagact
cttcggaggacgtccctgtgtctgaagggagagagacactttgcagagagtgagactttg
gaccagctgcctctcactaacccagaacattttggtactccggtcatcggcaagaagtca
aaccgaggaggacgtcgctcgtctcaggctgtggctgaggaggagaatgagtcctcctcc
agtgacgacgaggacgacgacagaagacgactcaacgatgaacttctggggaaaatctgc
agcgttgagagcgaagaggagtcgagtagctggtacctggctctggtggtgtctcccagc
tgtaacgaggagctgcaggtgaagaaggaccagtgtctggtcagagccttcagtgactcc
aaattctacacggtggcgaggagacacgtccacaccttcatctccaccaggtcggagttc
tccagcaggaaagggtttgaggcggcccagatgttcctgaggacaggtgaagtccctgac
atgtggaaaatggacatgagtcagattctggactcctcctccagcgacgatgaagagaag
gagagtgaggaggaggacgaagaggagacgaagaagaagaaacgcataaaggaggagccg
gaggaggaggagcccgatccagaggagagagaccgcttcctgcagcagctctataagttc
atggaggaccgagggacccccatcaacaagcctcccgtgttgggttataaagacctgaac
ctcttcaagcttttcagactggtctatcggctgggaggctgccacaagatagagtctggt
accgtgtggaagcaggtctacgtggatctggggatccccgtcctgaactctgctgcctcc
tacaacgtcaagactgcctacaagaagtatctgtacggctttgaggagtactgccgctct
gccaccatcaccttcagaaccatccatcacaacaacccccgccctcccaccacactggcc
aaccagaagcaggcaggggcggagcttagccgcccacccgccctgccagagaacgtggac
cctgtcaaagacgcgttggaggaggcagagagtgagagcgaggacgtgaaggacagacag
tcgtctccgagggggaggaggaggtgtgttagcagtcagctgactgcagagagcggttct
ccctccacaccagacaaaggaggagaagataacagtgaggagcagagggaggtgaggaga
cgcagcaacagacgaatggacgactccgacaaggggtctgaggaagaggaggagggggag
ggcgatgatgatgatgtggaggacgacgatgatgatgatgatgatgacgacgaggacgag
gatgaggatgacgacgacgatgaaagagggatggcgagagaaggctgtgaggaggaggag
gaggaggagggcgactctgtgacggggacgaaggtgcgggtgaaatacggcagagggaag
actcagaagatctacgaggctcacatcaagaagactgacttggacaatggagagcagttc
tacctggtccactactacggctggaacgtcaggtacgacgagtgggtgaaagccgaccgc
ctcatctggcccctggagaaaggacgccagaagagacggagaaagaaagttaagaacaaa
gatgagccggagacagaaagagatgaagaccagcctccgtcagcagtgttgaagcctccg
ggagccaagcgggggcgaccccagaccgggacgccacccggtggctcagcgggacacagc
gtctctaagacgccgagcagcgaggggcggtccaacggccggagcagccgtacggagatg
ccttccaacatggccaacggagacaacactcctcgcaggagaaccaggaggacgtcgggt
ttgtacgactccgatcaagcgtctaacgaggattctgggaactcctcagacgacagcgaa
tcagaaagcccgcctgacaaaaagccgtcgccacggcaagggcggaccgaaggcccgtcc
tgtaaagaggaggaggggaaggggggggaggaggaggagccaggtcaggttgctgacgtt
aagacggccgccaacaacaacactgtcgccacggcaacagctggtcagacacctgttgcc
atgacactgcagcgccccatcatgcctcaggagaaaaccgacaaactcctgagccaatta
aagaaggaggcggaacaaagggaggagccaacagtagaagctgccatgttgctggttcac
ctggacgaggagatgtcgtctgtccaagactctgaccacttgtttcctgcacaggaggtg
tttaacaagaggccttctcctcacgccatcacgtctcctccggatgccatcagggcgttt
cttgaagagaatgtgtcctctcctcagcccgtctcagcagaggaggaggacagcaggtcc
actcctctgtcctctcccagggtcaaaggtcgcagggccctcagggagacagtctccgaa
actcctcccagaatcttcctcagcacctgccctgcccacaaggaggtgtctcctccttgt
agcgtcctgaagagacaggacgagcccatggtggttctccactgccttcccacccagcgc
ctctcccccgagtctcccaccgcagattctgacactgactctgccaccgaggaggaggag
gagattcctgagaagaggagcagctccacattaaaacgaaaggccgcagagcagcgagaa
actgacaagaagctccgtcctgaaaggagacagctggaggccccttgtcccgaaactccc
ccagtcccttccaagatggccttaggagcttcgcccaaaggactcccctctcctctccac
agggcggagttagaaaaaagcgagggagcgatgaaggcagaagactggccccgtctagag
gacacgccgaaggaggggtcagaagagctgctgatgggcggagcctctaaagagtcagag
gtggttcctgggacgcctgccccagactcctcccccgctgaggaggtagaattgcagatt
ggtccggaggcgctggtctgccatgaggtggacctggacgacccggacgagaaggagaag
ccaaccgccccggagcacctcctcctgatgattagggagcagcaactagccccgccccct
aaaatcatccacgcctctctgccctccccccacctcccccaacctcaagtcatgcccttc
ttgcctgaacctgcaccctgcaccgctcctagccccgaggagctccaccccgcaaggagc
actggtggggaggagagaggagagcttcagggagactccagccccggctttgatggcagc
gcctcctccacctttgtggtgtctctgcaggagagtaaggacagaggtcagaagcggatg
ccggactgtaacttgagcccaatggccaagaaacagaaacgcaaccagaagagactcagc
acacctgggaaggtggagaagaacggagcaggtaacagcagtgacagtgaggaccagcct
cgtctgtcccagaagtctcgttttgttttgtctccttcgtctcacagcaaagacaaacac
accttctccccccagagggcctataagtggaccttccagctcgacgagctggacaacatg
tccagcacagagaggatctccttcctgcaggagaaactgcaggagatcaggaagtactac
atgaccctgaagtcggaggtggcctccattgacaggcggagaaagagactaaagaagaag
gagagagaagtgtcccacaccacgtcctccggctcctcggacactggcatgagtccgtcc
tctgcatcgcccactcagagcaccgtggccgtggagtgcaggtga
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