Gemmatimonas aurantiaca: GAU_3744
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Entry
GAU_3744 CDS
T00878
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
gau
Gemmatimonas aurantiaca
Pathway
gau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GAU_3744 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gau03019
]
GAU_3744 (rhlE)
Enzymes [BR:
gau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GAU_3744 (rhlE)
Messenger RNA biogenesis [BR:
gau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GAU_3744 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Flavi_DEAD
AAA_22
P-loop_SecA
UvrD-helicase
ELYS
Motif
Other DBs
NCBI-ProteinID:
BAH40786
NITE:
GAU_3744
UniProt:
C1AE59
LinkDB
All DBs
Position
complement(4393226..4394722)
Genome browser
AA seq
498 aa
AA seq
DB search
MTMTFSSLQLHPSLQQGLKELGFARPTPIQGEAIPPALEGRDVLACAMTGSGKTYAFLLP
ILHQLMSKPRGNTRALVLTPTRELAAQILESLQDVTTHTPLTGAAVFGGVGMGPQEHAFR
SGVDVIVATPGRLLDHFRQPYAKLDQLEYLVLDEADRMLDMGFLPEIKKILRHLPNRKRQ
TLFFSATMPPPIAALTQEMLNKPVTLNLQRQAAPAKGITQAVYPVSQELKSALLVALLKR
GDMPQALVFTRTKHRANRLASQLVTAGIKAERIHGNRSQSQRTQALAGFKDGSYQVLVAT
DIAARGIDVEALGHVVNFDVPVAAEDYIHRVGRTARAEATGEAFTFVSPEEEGELKLIER
AIKRALPRVTVPDFDYHAKPTQKLEVPIAERIAEIRKKKAEDRARAAAKVARRTAAQESE
AARKSAKDAKPSSGGASSGSRRRGPASGGGTGGAAGGGAAGGSGAPRGPARGPSKGPARG
ASRGPSRGPARGGDSPYK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgactttcagttcgttgcaactccatccgagcctccagcagggcctcaaggaa
ctcggtttcgcacgacccacgcccattcagggcgaggccattccaccggccctcgaaggc
cgcgacgtactcgcctgcgccatgaccggcagcggcaagacgtacgcgtttttgttgccc
attctgcatcagctcatgagcaagccgcgcggcaacacgcgcgcgttggtccttacgccc
acgcgtgagctggccgctcagattctcgaaagcctccaggacgtcaccacgcacaccccg
ctcaccggtgccgccgtttttggcggcgtgggcatgggtccgcaggaacacgcgttccgc
agcggcgtggatgtcatcgtcgccacgccgggccgcttgctcgatcacttccgtcagccg
tacgcgaagctcgatcagctcgaatatctcgtgctcgacgaagccgatcgcatgctcgac
atgggcttcctgcccgagatcaagaagatcctgcgccatctgcccaaccggaaacggcag
acgttgttcttcagcgccaccatgccgccgccaatcgcggcgttgacgcaggagatgctg
aacaagcccgtcacgctcaacctgcagcggcaggcggcgccggcgaagggtatcacgcag
gccgtgtaccccgtgtcgcaggaactcaagagcgcgctgctcgtggcgctgctcaagcgc
ggtgatatgccccaagcgttggtgttcacacgcaccaaacatcgcgccaatcgcctggcc
agccagctcgttaccgccggtatcaaggccgagcgtattcacggcaatcgctcgcagtcg
caacgcacgcaggcgctggccggcttcaaggacggttcgtatcaggtgctggtggccacc
gatatcgcggcgcgtggtatcgacgtggaagcgctgggccatgtggtcaacttcgatgtg
ccggtggccgcggaggactacatccatcgtgtcggccgcactgcgcgtgccgaagccact
ggtgaagcgttcacgttcgtgagcccggaagaagagggcgaactcaagctcatcgagcgc
gccatcaagcgggcgttgccgcgtgtgacggtgcccgacttcgactatcacgcgaagccg
acacagaagctcgaagtgcccatcgccgaacgcatcgccgagattcgcaagaaaaaggcg
gaagatcgggcacgtgcagcagccaaggtcgctcggcgtaccgcagcgcaggaatcggaa
gccgcccggaagtcggccaaggatgcgaagccgtcgtccggtggcgcgtcgtctggcagc
cgtcgtcgcggacctgccagcggtggtggaacgggtggcgcagccggtggtggagcggct
ggtggcagcggggcaccccgcggacccgcgcgtggtccgtccaagggacctgcccgcggt
gcttcgcgtggcccgtcacgcggtcccgcccgcggcggcgattcgccgtacaagtga
DBGET
integrated database retrieval system
