Gemmatimonas aurantiaca: GAU_3895
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Entry
GAU_3895 CDS
T00878
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
gau
Gemmatimonas aurantiaca
Pathway
gau00470
D-Amino acid metabolism
gau00550
Peptidoglycan biosynthesis
gau01100
Metabolic pathways
gau01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
gau00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GAU_3895 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GAU_3895 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
GAU_3895 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gau01011
]
GAU_3895 (ddl)
Enzymes [BR:
gau01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
GAU_3895 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
gau01011
]
Precursor biosynthesis
Amino acid ligase
GAU_3895 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
GARS_A
ATP-grasp
ATP-grasp_4
ATP-grasp_3
ATPgrasp_ST
RimK
ATPgrasp_YheCD
TTL
GSP_synth
Motif
Other DBs
NCBI-ProteinID:
BAH40937
NITE:
GAU_3895
UniProt:
C1AEL0
LinkDB
All DBs
Position
complement(4593039..4594073)
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AA seq
344 aa
AA seq
DB search
MSKSLRITVLLGGVSAERDVSLSSGLRIAMALREKGHEVICLDPAEGVLTRETERSLLAS
GVGSAPPSLEALAGLESRALSPVLGTLPELTEADCLFLALHGGQGEDGTIQALLDMVGVP
YTGSGHLASALAMDKHLSKVVLRSAGVATANWIMAPAPDSAETLDADDVGRHLDWPVVVK
PSKQGSTVGLSIVRAPEELAAAVREAFRYDDEVMIERFVPGRELTVGILGDAVLPTIEIQ
PVKELYDYECKYTPGMAKEFVAELSPEEASKLADQAKRAFQALKLRGYARIDFRLDPQGQ
PWCLEANTLPGMTPTSLIPQAAAAAGVLFPDLCERIVQLALAKR
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagtcgctccgcatcaccgtattgctcggcggggtctccgccgaacgtgacgtt
tccctctcgtccggactccgcatcgcgatggcgctgcgggaaaaggggcatgaagtcatc
tgcctcgacccggccgaaggggttctgacccgcgagaccgagcgcagcctgctggccagc
ggcgtaggcagtgcacccccgtcgctggaagcgctggccggactcgagtcccgtgcgctc
tcgccggtgctgggcaccttgcccgagctcaccgaagccgactgtctgttcctggcgctg
cacggcggacagggggaagacggcaccattcaggcgctgctcgacatggtgggggtgccg
tataccggcagcggccacctggcgagcgcgctggccatggacaaacacctcagcaaggtg
gtgctgcgttcggccggcgtggccaccgccaactggatcatggcgccggcacccgactct
gccgaaacgctggacgcggacgatgtggggcggcatctcgattggccggtggtggtgaag
ccgtcgaagcagggcagcacggtggggctgtccatcgtgcgcgcgccggaggagctggcc
gccgccgtgcgggaggcgttccgctacgacgacgaggtcatgatcgagcggttcgtgcct
gggcgggagctgacggtgggcattctgggtgatgccgtgctgccgaccatcgagatccag
ccggtgaaggagctgtacgactacgagtgcaagtacacgcccggtatggccaaggagttc
gtggccgaactgtctccggaagaggcgtcgaagctggccgaccaagcaaaaagggcgttt
caggccctcaagctgcgggggtatgcgcgcatcgatttccggctggatccccaggggcag
ccgtggtgtctggaagccaacacgttgccgggaatgacaccgacgagtctcattccgcag
gcggcggccgcagcgggcgtcttgtttcccgatctgtgtgaacgcatcgtgcaactggcg
ctcgcaaagcgctga
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