Gemmatirosa kalamazoonensis: J421_0896
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Entry
J421_0896 CDS
T03025
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba00470
D-Amino acid metabolism
gba00550
Peptidoglycan biosynthesis
gba01100
Metabolic pathways
gba01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
J421_0896
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
J421_0896
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
J421_0896
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gba01011
]
J421_0896
Enzymes [BR:
gba01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
J421_0896
Peptidoglycan biosynthesis and degradation proteins [BR:
gba01011
]
Precursor biosynthesis
Amino acid ligase
J421_0896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
GARS_A
Glyco_trans_4_4
Rimk_N
Motif
Other DBs
NCBI-ProteinID:
AHG88433
UniProt:
W0RGA9
LinkDB
All DBs
Position
complement(1020495..1021541)
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AA seq
348 aa
AA seq
DB search
MKITVLLGGFSAERDVSLNSGLRIAAALRSRGHEVTCVDPAGSGAAMTRDEEQALLDAGV
GTTPPSLEALSSLGGGSIPPGLAEWPAVREAEVVFLALHGGQGEDGTLQALFDLAGVRYT
GSGHLGSAIAMDKHLSKTLFRAAGVGTADWTMAPSPDSSTARRTHFHAEADALGLPLVVK
PSKQGSTVGLTVVRDAKDLDAAVAEAFKYDDEVMVECFVAGRELTVGILGADALPVIEIK
PKHEIYDYECKYTKGMAEEGVADLPEESVGRIQEQARLAFDALKLKGYARVDFRMDELGN
FFCLEANTLPGMTELSLIPQAAAAAGILFPELCERIVRQALTGPGPRS
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcacggttctgttaggcggcttctccgccgagcgcgacgtgtcgttgaactcg
gggctgcgcatcgccgcggcgctgcgctcgcgcgggcacgaggtgacgtgcgtggatccc
gcgggaagcggcgcggcgatgacgcgcgacgaggagcaggcgctgctcgacgccggcgtc
ggcaccacgccgccgtctctcgaggcgctgtcgtcgttaggcggcgggtccatcccgccg
gggctcgccgagtggccggcggtgcgcgaggcggaggtcgtgttcctcgcgctgcacggc
ggccagggcgaggacggcacgctgcaggcgctgttcgacctcgccggcgtgcgctacacc
ggcagtggccacctcggctcggcgatcgcgatggacaagcacctgtcgaagacgctgttc
cgcgccgcgggcgtcggcaccgccgactggacgatggcgccgtcgcccgacagcagcacc
gcacgacgcacccacttccacgcggaggccgacgcgctcgggctgccgctcgtcgtgaag
ccgtcgaagcagggatccacggtggggctcaccgtcgtacgggacgcgaaggacctcgac
gccgcggtggcggaggcgttcaagtacgacgacgaggtgatggtcgagtgcttcgtcgcc
ggacgcgagctgaccgtcgggatactcggcgccgacgcgctgcccgtgatcgagatcaag
ccgaagcacgagatctacgactacgagtgcaagtacacgaaggggatggcggaggagggg
gtggccgacctgccggaggagtcggtggggcggatccaggagcaggcgcggctcgcgttc
gacgcgctgaagctgaaggggtacgcgcgggtcgacttccggatggacgagctcgggaac
ttcttctgcctggaggccaatacgctgccggggatgacggagctgagcctcatcccgcag
gcggcggcggcggccgggatcttgtttcccgagttgtgcgagcgcatcgtgaggcaggcg
ctcacggggccgggcccacgctcctga
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