Gemmatirosa kalamazoonensis: J421_1252
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Entry
J421_1252 CDS
T03025
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
Organism
gba
Gemmatirosa kalamazoonensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6596
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
TPR_8
TPR_2
HTH_23
TPR_14
TPR_12
TPR_21
TPR_4
Motif
Other DBs
NCBI-ProteinID:
AHG88789
UniProt:
W0RCH0
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Position
complement(1421754..1423037)
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AA seq
427 aa
AA seq
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MTVADIHRTIDAVWRIESAKLIAGLARMVRDVGVAEDLAQDALVAALEKWPETGIPTNPG
AWLMATAKRRAIDLLRRDKLLDRKHAELAPELEARQEAAVPELDAALDDHVGDDLLRLIF
VACHPVLSTEARVALTLRLLGGLTTEEIARAFLVPEPTVAQRIVRAKKTLADKRVPFEVP
RGEEFHARLASVLQVIYLVFNEGYSATAGDDWVRPQLCEDALRLGRVLAGLTPEEPEVHG
LVALMEIQASRLRARVGPSGEPVLLLDQDRARWDRLLIRRGLTALARAEACAAARGEPLG
AYTLQAAIAACHARARVASDTDWARIARLYDALGDVTPSPIVELNRAVAVSMAAGPAAGL
AIVDALVADGALASYHLLPSVRGDFLMKLGRHDEARAELERAASLTKNARERALLLGRAA
ECAAKTA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtcgccgacatccaccgaaccatcgacgccgtctggcgcatcgagtcggcgaag
ctcatcgcgggactcgcgcgcatggtgcgcgacgtgggcgtggccgaggatctcgcgcag
gacgcgctggtcgcggcgctggagaagtggcccgagacgggcatcccgacgaacccgggc
gcgtggctcatggccaccgcgaagcggcgggccatcgacctcctgcgccgcgacaagctg
ctcgaccgcaagcacgcggagctcgcgccggagctcgaggcgagacaggaggcggccgtg
ccggagctcgacgccgcgctcgacgatcacgtgggggacgacctgctgcggctcatcttc
gtcgcgtgccacccggtgctgtcgacggaggcgcgcgtcgcgctcacgctgcgtctgtta
ggcgggctcacgaccgaggagatcgcgcgcgcgttcctcgtgccggagcccaccgtggcg
cagcgcatcgtgcgcgcgaagaagacgctcgccgacaagcgcgtgccgttcgaggtgccg
cgcggcgaggagttccacgcgcggctcgcgtccgtgctgcaggtgatctacctcgtgttc
aacgagggctactcggccaccgcgggcgacgactgggtgcggccgcagctgtgcgaggac
gcgctgcggctcgggcgcgtgctcgccgggctcacgccggaagagccggaggtgcacggc
ctcgtcgcgctgatggagatccaggcgtcgcggctgcgcgcgcgcgtggggccgtcgggg
gagccggtgctgctgctcgaccaggaccgcgcgcgctgggaccggctgctgatccggcgc
ggcctcacggcgctcgctcgcgccgaggcatgcgccgcggcgcgcggcgagccgttaggc
gcctacacgctgcaggcggcgatcgccgcgtgccacgcccgcgcgcgcgtcgcgtcggac
accgactgggcgcgcatcgcgcggctgtacgacgcgctcggcgacgtgacgccgtcgccg
atcgtggagctgaatcgcgccgtcgcggtgtcgatggcggcgggaccggcggccgggctc
gcgatcgtcgacgcgctcgtcgccgacggcgcgctcgcgagctaccacctgctgccgagc
gtgcgcggcgacttcctcatgaagctcggccgccacgacgaggcgcgcgcggagctcgag
cgcgccgcgtcgctcacgaagaacgcccgcgagcgcgccctgctgctcggccgcgccgcc
gaatgcgcggcgaagaccgcctga
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