Gemmatirosa kalamazoonensis: J421_3071
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Entry
J421_3071 CDS
T03025
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba00300
Lysine biosynthesis
gba00550
Peptidoglycan biosynthesis
gba01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
J421_3071
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
J421_3071
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gba01011
]
J421_3071
Enzymes [BR:
gba01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
J421_3071
Peptidoglycan biosynthesis and degradation proteins [BR:
gba01011
]
Precursor biosynthesis
Amino acid ligase
J421_3071
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AHG90608
UniProt:
W0RMD8
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All DBs
Position
3571364..3572869
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AA seq
501 aa
AA seq
DB search
MSPSAPDSSDRPRVEPRAIERALAAAGLLLEVEGTLPEAAQGITDDSRAVRPGTLFVAVR
GSAADGHAYLADAAQRGAVAALVERPGSTTLPALVVRDGRRAAAIAAAEAYGHPATALTL
VGVTGTNGKTTTAGMLRHLLDAPARAAASIGTLGVLVGSAGEEMPGGAGLTTPGPVELQR
VLRVLVDRGVRSVAMEVSSHSLDQRRVEGLRFDAAVFTNLTRDHLDYHGTMEAYFAAKAR
LVEYLEPQGAAIVNADDPAWAALPRAGRTITFSTAGADADVQMRDLAFDAAGTRATLVVG
GASAPVRVPLLGDFNVANAAAAVAAAHALGVSLGDIVERLATVPQVPGRLEILRERPTVL
RDYSHTPDSLERALAAMRPFTAGRLIVVFGAGGDRDPGKRPEMGRAAEQGADVVILTSDN
PRTEDPEKILDDIQAGMSRAPDARIEDRRAAIARALEIAGPDDVVVLAGKGHETYQIRGT
TKHPFDEREIVTELWNDMVGA
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgagtccctccgcccccgacagctccgacaggccgcgcgtggagccgcgcgccatcgag
cgcgcgctcgccgccgcggggctgctgctcgaggtagaagggacgctgccggaggcggcg
caggggatcacggacgacagccgcgcggtgcgtcccgggacgctgttcgtcgccgtgcgc
ggctccgcggccgacggccacgcgtacctcgccgacgccgcgcagcgcggcgccgtcgcg
gcgctcgtggagcggccgggcagcacgacgctccccgcgctcgtcgtgcgtgacggccgc
cgcgccgccgcgatcgccgcggccgaggcgtacggccatccggccacggcgctcacgctc
gtcggcgtcaccggcacgaacggcaagacgacgaccgccggcatgctgcgccacctgctc
gacgcgccggcgcgcgccgcggcgtcgatcggcacgttaggcgtcctcgtggggagcgcc
ggcgaggagatgccgggcggcgcgggtctcaccacgcccggcccggtggagctgcagcgc
gtgctgcgcgtgctcgtcgaccgcggcgtgcgctcggtcgccatggaggtgtcgtcgcac
tcgctcgaccagcgccgcgtcgaggggctgcggttcgacgcggcggtgttcacgaacctc
acgcgcgatcacctcgactaccacggcacgatggaggcgtacttcgcggcgaaggcgcgg
ctcgtcgagtacctcgagccgcagggcgccgcgatcgtgaacgccgacgatcccgcgtgg
gccgcgctgccgcgcgccgggcgcacgatcacgttcagcacggccggcgccgatgcggac
gtgcagatgcgcgacctcgcgttcgacgcggcgggcacgcgcgcgacgctggtggtgggc
ggtgcgtcggcgccggtgcgcgtgccgctcctcggcgacttcaacgtggcgaacgccgcc
gccgcggtcgccgccgcacacgcgttaggcgtctcgctcggcgacatcgtcgagcggctc
gccacggtgccccaggtgcccgggcgcctcgagatcctgcgcgaacggcccacggtgctg
cgcgactactcgcacacgccggactcgctcgagcgggcgctggccgcgatgcgcccgttc
acggcggggcggctcatcgtggtgttcggcgccggcggcgaccgcgacccgggcaagcgg
cccgagatggggcgcgccgcggagcagggcgccgacgtcgtcatcctcacgagcgacaac
ccgcggacggaggatccggagaagatcctcgacgacatccaggccggcatgtcgcgcgcg
cccgacgcgcgcatcgaggaccgccgcgcggcgatcgcgcgcgcgctggagatcgcgggc
cccgacgacgtcgtggtgctcgccggaaagggacacgagacgtatcagatccgcggaacc
acgaagcacccgttcgacgagcgtgagatcgtgaccgagctgtggaacgacatggtgggc
gcgtga
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