Gemmatirosa kalamazoonensis: J421_4294
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Entry
J421_4294 CDS
T03025
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba00061
Fatty acid biosynthesis
gba00071
Fatty acid degradation
gba01100
Metabolic pathways
gba01212
Fatty acid metabolism
gba02024
Quorum sensing
Module
gba_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
J421_4294
00071 Fatty acid degradation
J421_4294
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J421_4294
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gba01004
]
J421_4294
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gba04147
]
J421_4294
Enzymes [BR:
gba01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
J421_4294
Lipid biosynthesis proteins [BR:
gba01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
J421_4294
Exosome [BR:
gba04147
]
Exosomal proteins
Exosomal proteins of breast milk
J421_4294
Exosomal proteins of breast cancer cells
J421_4294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-ProteinID:
AHG91831
UniProt:
W0RM51
LinkDB
All DBs
Position
complement(4998381..5000195)
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AA seq
604 aa
AA seq
DB search
MSATVGTAEATRPRIALDPRGPYPTIPELVDAGLPRNTSGTHSATKREGRWIETSVRDFV
TMAQRAARGLAALGVAPGDRVAVHAEPSTEWLALDHAILSLGAVSVPIYPTQPGDQVAFI
LADSGASVYVTSAPRIWRGVAEHVKGVASVRHLVGIRGSLDARMLAWSDLLARGDGVDDA
RATVHPDDLATLIYTSGTTGTPKGVMLTHANITSNVLAMLERLPWDLEGEREGGRVLSYL
PLSHVFERTLSYTYQYIGYPIWFIEVAEEIAGDLGTVKPVHFTTVPRVLEKVHANVHARA
GEMQGMQKRIFAWAVDVADRYSVDRPPTAAERVRLAIADRLVYRKLRERFGGRLKAISAG
GAALSASVMNFFNAIGIFCGQGYGQTETSPVITIYDPKRLRAGSIGKPIANVEVRIADDG
ELLVRGPNVMRGYYNNPEQTAEVLDADGWLHTGDIVTRDADGFLFITDRKKDLLKLSTGK
YVAPQPIEMKLAASPLVEQAVVIGNGVQFCTALIVANMKELERRLAAQGLALDGPIEKSP
AACALVQAEIDAVNPTLPKWEQVRAFRLLGEPWTIEDGALTPTLKIKRRVIAERYRALIA
SMYA
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctacggtcggaaccgctgaagcgacgcgcccgcgcatcgccctcgatccgcgc
ggcccgtacccgacgatcccggagctcgtcgacgccggattgccgcgcaacacgtcgggc
acgcactcggccacgaagcgcgagggccggtggatcgagacgtcggtgcgcgacttcgtc
acgatggcgcagcgcgccgcgcgcggcctcgcggcgctcggcgtcgcgcccggcgaccgc
gtcgcggtgcacgcggagccgagcaccgagtggctcgcgctcgaccacgcgatcctgtcg
ctcggcgccgtgagcgtgccgatctatcccacgcagcccggcgaccaggtggcgttcatc
ctcgccgactcgggggcgagcgtgtacgtgacgtcggcgccgcggatctggcgcggcgtg
gcggagcacgtgaagggcgtcgcgtcggtgcgccatctcgtcggcatccgcggctcgctc
gacgcgcgcatgctcgcgtggagcgacctgctcgcgcgcggcgacggggtggacgacgcg
cgggcgacggtgcaccccgacgatctcgcgacgctgatctacacgtccgggacgaccggc
acgccgaagggcgtgatgctcacgcacgcgaacatcacctcgaacgtgctcgcgatgctc
gagcggctgccgtgggacctcgagggggagcgtgagggcgggcgcgtgctgtcgtacctg
ccgctgtcgcacgtgttcgagcgcacgctgtcgtacacgtaccagtacatcggctatccg
atctggttcatcgaggtcgccgaggagatcgccggcgatctcggcacggtgaagccggtg
cacttcaccaccgtgccgcgcgtgctggagaaggtgcacgcgaacgtgcacgcgcgcgcc
ggcgagatgcaggggatgcagaagcgcatcttcgcgtgggccgtggacgtcgccgatcgc
tactcggtggaccggccgccgacggcggccgagcgcgtgcggctcgcgatcgccgaccgg
ctcgtgtaccgcaagctgcgcgagcgcttcggcggacgactgaaggcgatcagcgccggc
ggggcggcgctctcggcgtcggtgatgaacttcttcaacgcgatcggcatcttctgcggc
caggggtacggccagaccgagacgtcgccggtgatcaccatctacgacccgaagcggctg
cgcgcgggctccatcggcaagccgatcgcgaacgtcgaggtgcgcatcgcggacgacggc
gagctgctcgtgcgcgggcccaacgtgatgcgcggctactacaacaaccccgagcagacc
gcggaggtgctcgacgccgacgggtggctgcacaccggcgatatcgtgacgcgcgacgcg
gacgggttcctgttcatcaccgatcggaagaaggacctgctgaagctctccaccggcaag
tacgtcgccccgcagccgatcgagatgaagctcgccgcgagcccgctcgtcgagcaggcg
gtcgtgatcggcaacggcgtgcagttctgcaccgccctcatcgtggccaacatgaaggag
ctcgagcggcgcctcgcggcgcaggggctcgcgctcgacggtccgatcgagaagtcgccg
gcggcctgcgcgctcgtgcaggcggagatcgacgccgtcaacccgacgctgccgaagtgg
gagcaggtgcgcgcgttccgtctgctcggcgagccgtggacgatcgaggacggcgcgctc
acgccgacgctgaagatcaagcggcgcgtgatcgccgagcggtaccgcgcgctcatcgcc
tcgatgtacgcgtga
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